Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq334 421 1e-112 seq279 304 2e-77 >seq334 Length=742376 Score = 421 bits (466), Expect = 1e-112 Identities = 1136/1713 (66%), Gaps = 65/1713 (4%) Strand=Plus/Plus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||||| ||||||| | || |||| ||| | |||||||||||||| |||||||| | Sbjct 394293 TGAACTGGATGGGTGCGGCAGCTGCCTGGGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 394352 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 | |||| || || ||||||| || | ||| ||| ||| ||| || Sbjct 394353 CGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCAT--TGA----TGGCTC-- 394404 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920 |||| | || ||| || ||||| || || | ||||| | || || || | Sbjct 394405 CCTC----ATGTGGATGTTTAGAGACTGAGATTGATCAATGAAGGCACCACGGTCAGCAG 394460 Query 243921 CCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGG 243979 |||| | | |||||| |||||| ||||| | | |||||||||| || ||||| Sbjct 394461 CCATCTGCACAATGGTCCT-CTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATA 394519 Query 243980 TGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGC 244039 | | |||| | |||||||| | || || | | | |||||| || | | Sbjct 394520 TCAGCCGGGATGCTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGATACGGTTCTTC 394579 Query 244040 ATGTTATCGTTCCACAGGCCCAAGCGCTC-CAGCGCCTCGACCAGGTGCCT---GTTCAC 244095 ||| || ||||| ||| | || || ||| || || || ||| ||| || Sbjct 394580 ATGGCCTCAGACCACAAGCCGA-GCTCTGTCAGATCCCTGA---GGAGCCAAGGGTTGAC 394635 Query 244096 CACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGAT 244155 ||||| ||||| || | ||||| || |||||||||| |||| | || ||||| | Sbjct 394636 GACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAA 394695 Query 244156 GCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAG 244215 || ||| |||||||||| || |||| ||| ||||| ||||| || | || || || Sbjct 394696 GCACTCATTGTTGCCCAGGATTTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGCAACAA 394755 Query 244216 ACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCC--CACATG 244273 ||||| | || || | || ||| || ||| ||| ||| | | || Sbjct 394756 GCTGTTGCGAACACCAGTCTCCTTGAT-------CTT--CTCCTTC-AGTGCATCCCAGT 394805 Query 244274 CCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT-GAC 244332 ||| ||||||| | | |||| ||||||||| |||||||| | || |||| ||| Sbjct 394806 CCC-AGAGGTCGGAGGGCTTGACATTCCACATGTCGAACTGCAGGATGCC-TTGCGAGAC 394863 Query 244333 GGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACA-GCTCTCGT 244391 ||||||||||||||| ||| |||||| || || || ||| | | || | | || Sbjct 394864 GGGGCTGCCCTCGTATGTCTTGTAGGGGCCCTCCACCTTGGCAATGTCACTTGATGCAGT 394923 Query 244392 CGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGC 244451 |||||| |||| ||||||||||||||||||| |||||||| || ||||||| | Sbjct 394924 -GAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCTGGGG 394982 Query 244452 AGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGA 244511 || ||| || |||| || || ||| ||||||| || ||||| || |||| || | Sbjct 394983 AGTCGAAAGGTATGCGCAGTGCCAAGAATGCGTCGGCAAGACCCTGAACACCGACACCAA 395042 Query 244512 TGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGA 244571 | |||| ||| ||| ||||| | ||| || || ||||| |||| | || | Sbjct 395043 TAGGTCGGTGCCGCATGTTGCTGTTGTAGGCCTCCTTGACCGGGTAGTGGTTGACATCAA 395102 Query 244572 TCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGT 244631 | | |||||| | ||||||| || | || || ||| || | |||| |||| || Sbjct 395103 TGATCTTGTTCAAGTTGCGGACGACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGT 395162 Query 244632 ACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCA 244691 | || | | | || | || | ||| | || || || | | ||||| Sbjct 395163 AGCAGTTG------TTGTCG-TAGTCA-----ACATATGCGGGCAGAGCAATGGAGGCCA 395210 Query 244692 GGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTAC 244751 |||||| || || ||||| || | | | ||||| | ||||| ||||| || || Sbjct 395211 AGTTGCACACCGCGACCTCATCTGGGGCAGAGTACTCAATGATCTCAGTGCAAAGATTGG 395270 Query 244752 TGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGA 244811 || |||||| ||||||| || || ||| ||| |||| | ||||||||| | Sbjct 395271 AGCTTCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTCCGGTTGGCGTGGTCCTTGTACA 395330 Query 244812 GCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAG 244871 |||||||||| || ||||| |||||| |||| | | | ||| || | | | Sbjct 395331 GCATGAAGGGGTTGCCAGTCTCAGTCTGGGCCTCGAGAATGGCATACCATAGCTTCTGGG 395390 Query 244872 CCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACT 244931 |||| | ||| ||||| | ||||| |||||| | ||| || ||||| |||| Sbjct 395391 CCTTCATGGTCTTGCGACCACGACCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCAAACT 395450 Query 244932 CGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGC 244991 | || || ||| | ||||| || ||| |||||||| || |||| || | Sbjct 395451 CCTCACCGTAGCAGTCGGCGAGGCCAGGACACTCGTTAGGGCACATCAGGGTCCAGTCAC 395510 Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051 || | || ||||| || |||||| || ||||| ||||||||||| |||| || || | Sbjct 395511 CGTTCTTCTCGACCCGCTTCATGAAAAGATCGGGAATCCAGAGGGCAAGGAAAAGATCAC 395570 Query 245052 TGGTCCTCTG--CTCGTCCGAGCCAGTG-TTCTTCCTCAGCTCCAAAAAGTCAAAGACGT 245108 || ||| | ||| ||| || ||| ||||| | ||| || | ||| || ||||| | Sbjct 395571 GGG--CTCGGATCTCCTCCTTACC-GTGATTCTTGCGCAGGTCAAGAAACTCGAAGACAT 395627 Query 245109 CGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGT 245168 || ||||||| ||||| | ||||| ||||| ||| ||||| ||||||||||| ||||||| Sbjct 395628 CGGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTGTTGCCACCCTGGT 395687 Query 245169 CCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAG 245224 | | | | ||| ||| |||||||| ||||| | || ||||| |||||| Sbjct 395688 CGA----CGTATCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGGGTGATGCCATTAGAG 395743 Query 245225 TGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCT 245284 ||||||||||| |||||| | ||| || | | || | | | | || || Sbjct 395744 GTACCGTTGGTGCCAGCGATGTATGAGCCGGTGGCACGGATGCGGTGCACGTTCAGACCA 395803 Query 245285 AGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCC 245344 | ||| || || ||||||||| | || || |||| | |||||| |||||||| Sbjct 395804 ATTCCACCCGCCATCTTGGAGATCATAGCACAAGTCTTTAGGGTGTCATAAATGCCCTCA 395863 Query 245345 ATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCAC 245404 ||||||||| |||||||| || || ||||| || ||||||||||||| ||| ||| Sbjct 395864 ATGCTGTCCTCCTTCATGTCGACGAGGAAGCATGATGACAGCTGGGGCTGGGGAGTGCCA 395923 Query 245405 GAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 | ||||||| |||||| ||| || || ||| Sbjct 395924 GCATTGAACAATGTGGGGGAGGCATGTGTGAAG 395956 >seq279 Length=349471 Score = 304 bits (336), Expect = 2e-77 Identities = 380/515 (74%), Gaps = 7/515 (1%) Strand=Plus/Minus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692 || |||||| |||||||| |||||||| ||||| |||||| || | ||| | || Sbjct 263128 CCGTGCATCCGCAAGAAGGCCGACTGGGCTCTCAAGTGGATCCAGGACCGCGAGTCCACC 263069 Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 | || | || | ||||| ||||| | ||||||||||||||||||||| ||||| ||| Sbjct 263068 TACGCCCAGCGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGCGCATTC 263009 Query 42753 GCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 ||||| || |||||||||||| || || || ||||| || || |||||||| ||||| Sbjct 263008 GCCTCTATTTTCTGGCTCAAGAAGCGTGGCCTC-ATGCCTGGCCTGACCTTCTCCAACGA 262950 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 ||||| | || ||||| ||||| | ||||| ||||| ||||||||||| || Sbjct 262949 GCTCATTTCTCGTGATGAGGGTCTGCACACCGACTTCGCCTGTCTCCTGTTCTC---TCA 262893 Query 42872 CCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931 ||| ||| || || ||| |||| |||| || ||||||||| ||||| || | || Sbjct 262892 CCTGAGGAACCGTCCAAGCAAGCAGCGTGTCCAGGACATCATCACCGAGGCTGTCGCCAT 262833 Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCT 42991 |||||||||||| | || || | ||||| |||| ||||||||||| | |||| Sbjct 262832 TGAGAAGGAGTTCTTGACCGAGGCTCTGCCATGCGCCCTCCTCGGCATGAACTCCAACCT 262773 Query 42992 CATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTC-AGCC 43050 |||| |||||||| ||| || ||||||| ||||||| | |||| | || Sbjct 262772 CATGAAGCAGTACATCGAGTTTGTTGCCGACCGTCTCCTGGTCGCTCTGGGCAACGAGAA 262713 Query 43051 GCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGA 43110 | | ||||| || || |||||||||||| |||||||||||||| | | ||||||| Sbjct 262712 G-GTTTACAAGTCGTCGAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGTGGCAAGA 262654 Query 43111 CCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||| || |||||||| |||| ||||||||| Sbjct 262653 CCAACTTCTTTGAGAAGCGTGTCGGTGACTACCAG 262619 Score = 134 bits (148), Expect = 3e-26 Identities = 235/336 (70%), Gaps = 7/336 (2%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCT 42358 |||||| |||||||||||| | || | ||| |||||| ||||||||||| || || Sbjct 263522 ATCTGGCAGATGTACAAGAAGCATGAAGCT-TCCTTCTGGACTGCCGAGGAGATCGATCT 263464 Query 42359 GGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCA 42414 |||||||| | || |||| || || | |||| || ||||| | ||| || Sbjct 263463 CTCCAAGGACCTGCACGACTGG-AGCAACCGCCTGACCGACGACGAACGATACTTCGTCT 263405 Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474 |||| || ||||||||||| || || || || || ||||| |||||||||| Sbjct 263404 CCCACATCCTCGCCTTCTTCGCTGCTTCAGATGGAATCGTCAACGAGAACCTGGTGGAGC 263345 Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534 | |||| ||||| ||| | ||||||||||||||||||||||||||||| | Sbjct 263344 GCTTCAGCGGCGAGGTTCAGATCCCAGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGA 263285 Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCG 42594 | |||||| | ||||||||| |||| | || || |||| |||||| ||| || | Sbjct 263284 TGGAGAACATCCACTCTGAGACGTACTCGCTTCTCATCGACACCTACATCAAGGAGCCGG 263225 Query 42595 TCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGA 42630 | |||| | | || |||| ||||| || |||| Sbjct 263224 CCCAGCGCACCCACCTTCTCAATGCCATTGACACGA 263189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944327572823600