Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq334 232 8e-56 >seq334 Length=742376 Score = 232 bits (256), Expect = 8e-56 Identities = 1171/1842 (64%), Gaps = 43/1842 (2%) Strand=Plus/Plus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 ||||||| |||||| || |||| | |||||||||||||| || |||||||| | Sbjct 394293 TGAACTGGATGGGTGCGGCAGCTGCCTGGGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 394352 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTC-CATG 113683 | |||||||| | | ||||| || | |||| | || ||| || | |||| Sbjct 394353 CGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATTGATGG-CTCCCTCATG 394411 Query 113684 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATC 113743 || ||| | | || |||||||| |||||| ||||| || || ||||| | | Sbjct 394412 TGGATGTTTAGAGACTGAGATTGATCAATGAAGGCACCACGGTCAGCAGCCATCTG---C 394468 Query 113744 ACATCCTTCATCTT---GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 113800 ||| || ||| ||| ||||| || || |||||||| ||| |||||| | ||| Sbjct 394469 ACAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATATCAGCCGGG 394528 Query 113801 ATATCCACGA-TATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTT 113859 || | | || | || || ||||| ||| || | || || | | |||||| ||| Sbjct 394529 ATG-CTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGATACGGTTCTTCATGGCCTC 394587 Query 113860 TGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTC 113919 ||||| | || | || | | |||||| | ||| ||||| || ||||| Sbjct 394588 AGACCACAAGCCGAGCTCTGTCAGATCCCTGAGGAGCCAAGGGTTGACGACCTGGAACTC 394647 Query 113920 ACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTT 113979 || ||||| |||| | | ||||| |||| |||||||||||||||||||||||||| Sbjct 394648 GCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCACTCATTGTT 394707 Query 113980 ACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAG 114039 |||| |||||| | || || || |||||||| ||||||| | | |||||| || | Sbjct 394708 GCCCAGGATTTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGCAACAAGCTGTTGCGAAC 394767 Query 114040 ACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCC 114099 ||| | ||| | || ||||| || || |||||||| || | | || | Sbjct 394768 ACCAGTCTCCTTGATCTTCTCCTTCAGTGCATCCCAGTCCCAGAGGTCGGAGGGCTTGAC 394827 Query 114100 CTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTA 114159 | |||||| || ||||| ||||| ||||| ||| | || ||||| |||||| ||| Sbjct 394828 ATTCCACATGTCGAACTGCAGGATGCCTTGCGAGACGGGGCTGCCCTCGTATGTCTTGTA 394887 Query 114160 TGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTC 114219 |||||||| |||| || | || || |||||| ||||| || || ||||| Sbjct 394888 GGGGCCCTCCACCTTGGCAATGTCACTTGATGCAGTGAGGGCAGCGTGGTAGATGGTCTC 394947 Query 114220 AAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG--GCACAAA 114277 || || | |||| | |||||| ||| || || | | || | | || Sbjct 394948 GAAGATCTGCTTGTTCAGCTCACGGGCCTCTGGGGAGTCGAAAGGTATGCGCAGTGCCAA 395007 Query 114278 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 114337 ||| | || || ||||| || ||||||| ||||| || || || | ||| || | Sbjct 395008 --GAATGCGTCGGCAAGACCCTGAACACCGACACCAATAGGTCGGTGCCGCATGTT--GC 395063 Query 114338 TTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 114394 | | | || |||| || || || || ||| || | | | || | || | Sbjct 395064 TGTTG-TAGGCCTCCTTGACCGGGTAGTGGTTGACATCAATGATCTTGTTCAAGTTGCGG 395122 Query 114395 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG 114454 ||| |||| || | || || | || | | | | | | | | || | | Sbjct 395123 ACGACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCAGTTGTTGTCGTAGTCA 395182 Query 114455 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 114514 ||||| || || || || || |||| || ||||| | | |||||| ||| | Sbjct 395183 ACATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACACCGCGACCTCATCTGGGGCAGAG 395242 Query 114515 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 114574 ||||| || || || || || | ||| || || ||||| |||| |||||| || || Sbjct 395243 TACTCAATGATCTCAGTGCAAAGATTGGAGCTTCGGATGGTACCCAGGTTCTTCTGGTTG 395302 Query 114575 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 114634 ||| ||| |||||||| |||||| | || | || ||||| || |||| | Sbjct 395303 CTCTTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCTGGGCC 395362 Query 114635 TTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTG---GCTCGCCCCTC 114690 | |||||| || | ||| | | || | ||| || ||| ||| | || ||||| Sbjct 395363 TCGAGAATGGCATACCATAGCTTCTG-GGCCTTCA---TGGTCTTGCGACCACGACCCTC 395418 Query 114691 CTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGG 114750 || |||||||| |||||| || |||||||| ||||| | || | ||| || || Sbjct 395419 CTTCTCGTACTGCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCGAGGCCAGG 395478 Query 114751 TGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAG 114810 || | ||||| | || | ||| | ||| || ||| || ||||||||||| || Sbjct 395479 ACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAG 395538 Query 114811 GTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATT 114870 || || |||||||| || ||| ||||| || || || || | || ||||| Sbjct 395539 ATCGGGAATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTACCGTGATT 395598 Query 114871 GAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGAT 114930 |||| || | ||| || | || ||| |||||||| || || ||||| | |||| Sbjct 395599 CTTGCGCAGGTCAAGAAACTCGAAGACATCGGCGTGCCATGGCTCAAGGTAGATAGCGAA 395658 Query 114931 TGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCG 114987 | || ||| ||| |||||| || || | || ||| || || || || Sbjct 395659 GGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGTTGAAGACCCG 395718 Query 114988 AAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTG 115045 |||||||| |||| |||| ||| || || || || ||| || ||| | || Sbjct 395719 CAGCATTGGGGTGATGCCATTAGAGGTACCGTTGGTGCCAGCGATGTATGAGCC--GGTG 395776 Query 115046 GCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 115105 || | || || | || || |||||| || || ||| ||| ||||| || || Sbjct 395777 GCACGGATGCGGTGCACGTTCAGACCAATTCCACCCGCCATCTTGGAGATCATAGCACAA 395836 Query 115106 TCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAG 115165 | | || || | || || || || || ||| |||| | ||| |||||||| Sbjct 395837 GTCTTTAGGGTGTCATAAATGCCCTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAT 395896 Query 115166 CTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 115225 |||| || ||| || || ||||| ||||| | || || | || || |||| Sbjct 395897 GATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAACAATGTGGGGGAGGCATGTGTGAAG 395956 Query 115226 ATACCT-TGGGACATCTTATCGTAGGTCTCCAAGAC---GGCGGGAATGTCTTCCCCGTG 115281 | || | | |||||| | ||| ||||| | ||| || | |||| ||| | Sbjct 395957 A-ACTTGTTTGACATCAGGTTGTATGTCTCAATGACCCTTTCGACATCGTCTCCCCAG-- 396013 Query 115282 AATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAG 115341 ||||||| | ||| ||||| | ||||| || || || | | |||||||||| Sbjct 396014 -ATACCGACAGCGACACGCATGATCATGTGCTGTGGCCGCTCGACAACTTTACCATCGAG 396072 Query 115342 CCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 115383 | | ||||||| ||||| |||||||| || ||||| Sbjct 396073 CTTGAGGAGGTATGAACGCTCCAGGGTCTTGAAGCCGAAATA 396114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597346245083800