Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq512 109 5e-19 seq1 100 3e-16 >seq512 Length=287951 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | || || ||||| | || || || |||||||||||||| || | Sbjct 18410 ACCGCCACGAAGACGGAGGACGAGATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGA 18469 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||| || ||||||||||||||| | || || ||||||||||| || || Sbjct 18470 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCAGGGGG 18529 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| || || | ||||| || || || Sbjct 18530 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGGAGGACTCGAC 18589 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| || | || || ||||| || ||||| Sbjct 18590 CTCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 18637 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || ||||| || || |||||||| || | || ||| ||| | || Sbjct 18198 AGAACCAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGCCCATCC 18257 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| || ||| | || || ||||||||||| || || || || || || || Sbjct 18258 TCGAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 18317 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || || || || || || | || | |||| Sbjct 18318 TGGATCTTGGACTTGACATTGTCGATGGTGTCTGAGGACTCGACCTCGAGGGTAATGGTC 18377 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| |||| ||| || ||||| || ||||| Sbjct 18378 TTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 18409 >seq1 Length=1124325 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | || || || || | || || || || || |||||||| || | Sbjct 67695 ACCACCGCGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 67636 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||| || |||||||||||||| | || || ||||||||||| || || Sbjct 67635 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGG 67576 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || || || ||| ||| || | || || | ||||| Sbjct 67575 AATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCAC 67516 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||| || | || || ||||| || ||||| Sbjct 67515 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 67468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499638648123400