Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq334 266 3e-66 >seq334 Length=742376 Score = 266 bits (294), Expect = 3e-66 Identities = 1074/1671 (64%), Gaps = 48/1671 (3%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | || || | |||||| || |||||| || |||||||||||| | ||||| | Sbjct 396120 TACCAATATTTCGGCTTCAAGACCCTGGAGCGTTCATACCTCCTCAAGCTCGATGGTAAA 396061 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 ||| |||||| || || || || | ||||| ||||| |||| || || |||| Sbjct 396060 GTTGTCGAGCGGCCACAGCACATGATCATGCGTGTCGCTGTCGGTATCTGGGGAGACGA- 396002 Query 93838 ATGCCGAATGTTT--TGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCC 93894 || |||| | | | | | | || ||| ||||| | || |||| || Sbjct 396001 -TGTCGAAAGGGTCATTGAGACATACAACCTGATGTCAAACAAGTTCTTCACACATG-CC 395944 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 |||| || ||||||| || || || || ||| ||| |||| || || ||||| | Sbjct 395943 TCCCCCACATTGTTCAATGCTGGCACTCCCCAGCCCCAGCTGTCATCATGCTTCCTCGTC 395884 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| ||| ||| || |||| |||| ||| ||| ||||| | || Sbjct 395883 GAC-ATGAAGGAGGACAGCATTGAGGGCATTTATGACACCCTAAAGACTTGTGCTATGAT 395825 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 ||| || ||||| ||||| || | | || ||| | | ||||||| || || || Sbjct 395824 CTCCAAGATGGCGGGTGGAATTGGTCTGAACGTGCACCGCATCCGTGCCACCGGCTCATA 395765 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 |||| || ||||| || ||||| || ||| || ||| ||||| |||||||||||||| Sbjct 395764 CATCGCTGGCACCAACGGTACCTCTAATGGCATCACCCCAATGCTGCGGGTCTTCAACAA 395705 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || || ||||| ||||||||||| | | | ||| | ||||| |||| || Sbjct 395704 CACCGCCCGATACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTCGCTATCTACCT 395645 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 ||||| |||||||| || || | || | |||||||| ||||| ||||| || || Sbjct 395644 TGAGCCATGGCACGCCGATGTCTTCGAGTTTCTTGACCTGCGCAAGAATCACGGTAAGGA 395585 Query 94254 TCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 ||||| | ||| | || || ||| || |||||| | || || ||||| ||||| Sbjct 395584 ---GGAGATCCGAGCCCGTGATCTTTTCCTTGCCCTCTGGATTCCCGATCTTTTCATGAA 395528 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 || |||||||| ||| | ||||| || | || || || || ||||| || || | Sbjct 395527 GCGGGTCGAGAAGAACGGTGACTGGACCCTGATGTGCCCTAACGAGTGTCCTGGCCTCGC 395468 Query 94371 CGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGG 94429 |||| | || | ||||| | | || | | ||||| | |||| | || Sbjct 395467 CGACTGCTACGGTGAGGAGTTTGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGTCGTGG 395408 Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 | | ||| ||| | || |||||| ||| || || | || | ||| |||| Sbjct 395407 TC-GCAAGACCATGAAGGCCCAGAAGCTATGGTATGCCATTCTCGAGGCCCAGACTGAGA 395349 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 | || | |||| ||| ||| ||||||| | |||| ||| ||||||| || ||| Sbjct 395348 CTGGCAACCCCTTCATGCTGTACAAGGACCACGCCAACCGGAAGAGCAACCAGAAGAACC 395289 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 | || ||| ||||| ||||| ||||| ||||| | ||||| || | || || | Sbjct 395288 TGGGTACCATCCGAAGCTCCAATCTTTGCACTGAGATCATTGAGTACTCTGCCCCAGATG 395229 Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC- 94668 || | || ||||| ||| ||| |||||| ||| || | | || || |||| Sbjct 395228 AGGTCGCGGTGTGCAACTTGGCCTCCATTGCTCTGCCCGCATATGT------TGACTACG 395175 Query 94669 ACGTCTACTGCTTC--GTTCGATC---TGGAGGAGCTTGTGAACTTCGCGGGAAGGATGG 94723 || | |||||| | ||| | | || | ||| || | ||| | | Sbjct 395174 ACAACAACTGCTACAACTTCCAGCAGTTGCACGAGGTTACCCAGGTCG---------TCG 395124 Query 94724 TCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACT 94783 || ||| |||||| | | || || ||| |||||| ||| |||||| | ||| Sbjct 395123 TCCGCAACTTGAACAAGATCATTGATGTCAACCACTACCCGGTCAAGGAGGCCTACAACA 395064 Query 94784 CAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGA 94843 ||| || ||| || || || || |||| || |||||| | || ||||| | || Sbjct 395063 GCAACATGCGGCACCGACCTATTGGTGTCGGTGTTCAGGGTCTTGCCGACGCATTCTTGG 395004 Query 94844 TGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAA 94903 |||| | || | |||||| || || | |||| | | || ||||| | Sbjct 395003 CACTGCGCATACCTTTCGACTCCCCAGAGGCCCGTGAGCTGAACAAGCAGATCTTCGAGA 394944 Query 94904 GCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCAC 94963 ||| || ||| ||| | | ||| || | |||| ||| ||| || Sbjct 394943 CCATCTACCACGCTGCCCTCACTGCATCAAGTGACATTGCCAAGGTGGAGGGC---CCCT 394887 Query 94964 ACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTG 95023 || | | | | || ||| | || ||||| | ||||||||| | ||| || Sbjct 394886 ACAAGACATACGAGGGCAGCCCCGTCTCGCAAGGCATCCTGCAGTTCGACATGTGGAATG 394827 Query 95024 TGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAA--ACAC-G 95080 | |||||||| | || | |||||||| || || | || | ||||| | || | Sbjct 394826 TCAAGCCCTCCGACCTCTGGGACTGGGATGCACT-GAAGGAGAAG--ATCAAGGAGACTG 394770 Query 95081 GTGTGAAAAACGCGCTGCTTG-TGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTT 95139 |||| ||| ||| ||| |||| || |||||||| || || ||| |||| ||||| Sbjct 394769 GTGTTCGCAAC-AGCTTGTTGCTGGCACCAATGCCCACTGCTTCGACGTCGCAAATCCTG 394711 Query 95140 GGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCC 95199 |||||||| |||| || || || | |||||||||| | ||| | | || |||||||| Sbjct 394710 GGCAACAATGAGTGCTTTGAGCCATACACCTCCAACATCTACCAGCGACGTGTGCTCGCT 394651 Query 95200 GGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGG 95259 || || |||| ||| ||||| ||||| |||| ||||| || || ||||| Sbjct 394650 GGCGAGTTCCAGGTCGTCAACCCTTGGCTCCTCAGGGATCTGACAGAGCTCGGCTTGTGG 394591 Query 95260 GGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAA 95319 ||| | ||||||| | | || | || ||| | |||||||| || Sbjct 394590 TCTGAGGCCATGAAGAACCGTATCATCGCCGAGGATGGTTCCATTCAGAACATTCCTAGC 394531 Query 95320 ATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG 95370 || |||| || |||||||| |||||||||||||| ||||||||| | ||| Sbjct 394530 ATCCCGGCTGATATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCTCAG 394480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494717108720600