Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq334 266 3e-66
>seq334
Length=742376
Score = 266 bits (294), Expect = 3e-66
Identities = 1074/1671 (64%), Gaps = 48/1671 (3%)
Strand=Plus/Minus
Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777
||| | || || | |||||| || |||||| || |||||||||||| | ||||| |
Sbjct 396120 TACCAATATTTCGGCTTCAAGACCCTGGAGCGTTCATACCTCCTCAAGCTCGATGGTAAA 396061
Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837
||| |||||| || || || || | ||||| ||||| |||| || || ||||
Sbjct 396060 GTTGTCGAGCGGCCACAGCACATGATCATGCGTGTCGCTGTCGGTATCTGGGGAGACGA- 396002
Query 93838 ATGCCGAATGTTT--TGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCC 93894
|| |||| | | | | | | || ||| ||||| | || |||| ||
Sbjct 396001 -TGTCGAAAGGGTCATTGAGACATACAACCTGATGTCAAACAAGTTCTTCACACATG-CC 395944
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
|||| || ||||||| || || || || ||| ||| |||| || || ||||| |
Sbjct 395943 TCCCCCACATTGTTCAATGCTGGCACTCCCCAGCCCCAGCTGTCATCATGCTTCCTCGTC 395884
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | |||| ||| ||| || |||| |||| ||| ||| ||||| | ||
Sbjct 395883 GAC-ATGAAGGAGGACAGCATTGAGGGCATTTATGACACCCTAAAGACTTGTGCTATGAT 395825
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073
||| || ||||| ||||| || | | || ||| | | ||||||| || || ||
Sbjct 395824 CTCCAAGATGGCGGGTGGAATTGGTCTGAACGTGCACCGCATCCGTGCCACCGGCTCATA 395765
Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133
|||| || ||||| || ||||| || ||| || ||| ||||| ||||||||||||||
Sbjct 395764 CATCGCTGGCACCAACGGTACCTCTAATGGCATCACCCCAATGCTGCGGGTCTTCAACAA 395705
Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193
| | || || ||||| ||||||||||| | | | ||| | ||||| |||| ||
Sbjct 395704 CACCGCCCGATACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTCGCTATCTACCT 395645
Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253
||||| |||||||| || || | || | |||||||| ||||| ||||| || ||
Sbjct 395644 TGAGCCATGGCACGCCGATGTCTTCGAGTTTCTTGACCTGCGCAAGAATCACGGTAAGGA 395585
Query 94254 TCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310
||||| | ||| | || || ||| || |||||| | || || ||||| |||||
Sbjct 395584 ---GGAGATCCGAGCCCGTGATCTTTTCCTTGCCCTCTGGATTCCCGATCTTTTCATGAA 395528
Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370
|| |||||||| ||| | ||||| || | || || || || ||||| || || |
Sbjct 395527 GCGGGTCGAGAAGAACGGTGACTGGACCCTGATGTGCCCTAACGAGTGTCCTGGCCTCGC 395468
Query 94371 CGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGG 94429
|||| | || | ||||| | | || | | ||||| | |||| | ||
Sbjct 395467 CGACTGCTACGGTGAGGAGTTTGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGTCGTGG 395408
Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489
| | ||| ||| | || |||||| ||| || || | || | ||| ||||
Sbjct 395407 TC-GCAAGACCATGAAGGCCCAGAAGCTATGGTATGCCATTCTCGAGGCCCAGACTGAGA 395349
Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549
| || | |||| ||| ||| ||||||| | |||| ||| ||||||| || |||
Sbjct 395348 CTGGCAACCCCTTCATGCTGTACAAGGACCACGCCAACCGGAAGAGCAACCAGAAGAACC 395289
Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609
| || ||| ||||| ||||| ||||| ||||| | ||||| || | || || |
Sbjct 395288 TGGGTACCATCCGAAGCTCCAATCTTTGCACTGAGATCATTGAGTACTCTGCCCCAGATG 395229
Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC- 94668
|| | || ||||| ||| ||| |||||| ||| || | | || || ||||
Sbjct 395228 AGGTCGCGGTGTGCAACTTGGCCTCCATTGCTCTGCCCGCATATGT------TGACTACG 395175
Query 94669 ACGTCTACTGCTTC--GTTCGATC---TGGAGGAGCTTGTGAACTTCGCGGGAAGGATGG 94723
|| | |||||| | ||| | | || | ||| || | ||| | |
Sbjct 395174 ACAACAACTGCTACAACTTCCAGCAGTTGCACGAGGTTACCCAGGTCG---------TCG 395124
Query 94724 TCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACT 94783
|| ||| |||||| | | || || ||| |||||| ||| |||||| | |||
Sbjct 395123 TCCGCAACTTGAACAAGATCATTGATGTCAACCACTACCCGGTCAAGGAGGCCTACAACA 395064
Query 94784 CAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGA 94843
||| || ||| || || || || |||| || |||||| | || ||||| | ||
Sbjct 395063 GCAACATGCGGCACCGACCTATTGGTGTCGGTGTTCAGGGTCTTGCCGACGCATTCTTGG 395004
Query 94844 TGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAA 94903
|||| | || | |||||| || || | |||| | | || ||||| |
Sbjct 395003 CACTGCGCATACCTTTCGACTCCCCAGAGGCCCGTGAGCTGAACAAGCAGATCTTCGAGA 394944
Query 94904 GCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCAC 94963
||| || ||| ||| | | ||| || | |||| ||| ||| ||
Sbjct 394943 CCATCTACCACGCTGCCCTCACTGCATCAAGTGACATTGCCAAGGTGGAGGGC---CCCT 394887
Query 94964 ACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTG 95023
|| | | | | || ||| | || ||||| | ||||||||| | ||| ||
Sbjct 394886 ACAAGACATACGAGGGCAGCCCCGTCTCGCAAGGCATCCTGCAGTTCGACATGTGGAATG 394827
Query 95024 TGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAA--ACAC-G 95080
| |||||||| | || | |||||||| || || | || | ||||| | || |
Sbjct 394826 TCAAGCCCTCCGACCTCTGGGACTGGGATGCACT-GAAGGAGAAG--ATCAAGGAGACTG 394770
Query 95081 GTGTGAAAAACGCGCTGCTTG-TGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTT 95139
|||| ||| ||| ||| |||| || |||||||| || || ||| |||| |||||
Sbjct 394769 GTGTTCGCAAC-AGCTTGTTGCTGGCACCAATGCCCACTGCTTCGACGTCGCAAATCCTG 394711
Query 95140 GGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCC 95199
|||||||| |||| || || || | |||||||||| | ||| | | || ||||||||
Sbjct 394710 GGCAACAATGAGTGCTTTGAGCCATACACCTCCAACATCTACCAGCGACGTGTGCTCGCT 394651
Query 95200 GGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGG 95259
|| || |||| ||| ||||| ||||| |||| ||||| || || |||||
Sbjct 394650 GGCGAGTTCCAGGTCGTCAACCCTTGGCTCCTCAGGGATCTGACAGAGCTCGGCTTGTGG 394591
Query 95260 GGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAA 95319
||| | ||||||| | | || | || ||| | |||||||| ||
Sbjct 394590 TCTGAGGCCATGAAGAACCGTATCATCGCCGAGGATGGTTCCATTCAGAACATTCCTAGC 394531
Query 95320 ATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG 95370
|| |||| || |||||||| |||||||||||||| ||||||||| | |||
Sbjct 394530 ATCCCGGCTGATATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCTCAG 394480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494717108720600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |