Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq334 194 2e-44 seq279 131 2e-25 seq1 104 2e-17 seq512 102 8e-17 >seq334 Length=742376 Score = 194 bits (214), Expect = 2e-44 Identities = 981/1544 (64%), Gaps = 37/1544 (2%) Strand=Plus/Plus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| || || |||||||| || | ||| |||| | || | ||| ||| | | Sbjct 394629 GGTTGACGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATG 394688 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | |||||| | || || ||||| || ||||| | ||| | || || ||||| |||| Sbjct 394689 GCTCAAAGCACTCATTGTTGCCCAGGATTTGCGACGTCGAAGCAGTGGGCATTGGTGCCA 394748 Query 153148 CCAACAAAGAATTCCGCAAGCC-GTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206 |||||| || || | || || || || || ||||||| || | ||| ||| Sbjct 394749 GCAACAAGCTGTTGCGAACACCAGTCTCCTTGATCTTC-TCCTTCAGTGCATCCCAGTCC 394807 Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGA 153266 || || | || || | | |||||||||||| |||| | | ||| | | |||| Sbjct 394808 CAGAGGTCGGAGGGCTTGACATTCCACATGTCGAACTGCAGGATGCCTTGCGAGACGGGG 394867 Query 153267 CTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGC 153326 ||||| | | || ||||| ||| || | ||| | || | || ||| Sbjct 394868 CTGCCCTCGTATGTCTTGTAGGGGCCCTCCACCTTGGCAATGTCACTTGATGCAGTGAGG 394927 Query 153327 GCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGA--ACGGCCGCTTCTTCGCTCT 153384 || | | ||| ||||| ||| ||| || || || || |||| || ||| | | Sbjct 394928 GCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGG--GCCTCTGGGGAGT 394985 Query 153385 CGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGG 153444 || | || |||||||| || || |||||||| |||||||| | |||||| || || | Sbjct 394986 CGAAAGGTATGCGCAGTGCCAAGAATGCGTCGGCAAGACCCTGAACACCGACACCAATAG 395045 Query 153445 GTCGATGCTTCTCGTTGCTGC-----GCCTCGCGCTCGCTATGGGATAGTGATTGCGATC 153499 |||| ||| | ||||||| ||||| || | | || ||||| ||| ||| Sbjct 395046 GTCGGTGCCGCATGTTGCTGTTGTAGGCCTC---CTTG--ACCGGGTAGTGGTTGACATC 395100 Query 153500 GATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATC 153559 || || ||||| | |||||| || || || | || | | | | | | || ||| | Sbjct 395101 AATGATCTTGTTCAAGTTGCGGACGACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTT 395160 Query 153560 ATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGAC 153619 ||| | | |||| | || || || ||||| || |||| || || || Sbjct 395161 GTAGCAGTTGTTGTCGTAGTCAACATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACAC 395220 Query 153620 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTAT 153679 || ||| || | | | ||||| | |||||| | ||| || ||| || | || Sbjct 395221 CGCGACCTCATCTGGGGCAGAGTACTCAATGATCTCAGTGCAAAGATTGGAGCTTCGGAT 395280 Query 153680 GACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGG 153739 | |||| || | ||| ||||| || || ||| ||| ||| | |||||| | || Sbjct 395281 GGTACCCAGGTTCTTCTGGTTGCTCTTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGG 395340 Query 153740 TCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGTCCTGCGCTCGCAC 153796 ||| ||||| || | |||| || | ||| || || | ||| || || Sbjct 395341 GTTGCCAGTCTCAGTCTGGGCCTCGAGAATGGCATACC-AT--AGCTTCTGGGCCTTCAT 395397 Query 153797 CCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCC 153856 || ||| || ||||| ||||||| ||||||| || ||||||||| || || Sbjct 395398 GGTCTTGCGACCACGACCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCAAACTCCTCACC 395457 Query 153857 GTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGC 153916 |||||||||||||||||| ||||||| | || |||||||| | ||| | ||| Sbjct 395458 GTAGCAGTCGGCGAGGCCAGGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTT 395517 Query 153917 GTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTT 153976 | ||| || |||||| ||||| || | |||||| || | || || || || Sbjct 395518 CTCGACCCGCTTCATGAAAAGATCGGGAATCCAGAGGGCAAGGAAAAGATCACGGGCTCG 395577 Query 153977 GCAATCCTCC---GCGCCCATGTTGCGTTTCAGATTGAG-CACGCTATAGATGTCGGCGT 154032 | |||||| || | ||||| ||| | || || | | ||| ||||||| Sbjct 395578 GATCTCCTCCTTACCGTGATTCTTGCG---CAGGTCAAGAAACTCGA-AGACATCGGCGT 395633 Query 154033 GCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGACGT 154089 |||| || |||| ||||| || | |||||| |||| || || ||||| ||||||| Sbjct 395634 GCCATGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGT 395693 Query 154090 GGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGG 154149 || | | ||||||||||| |||| ||| || | ||| | | ||| ||||||| Sbjct 395694 ATCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGGGTGATGCCATTAGAGGTACCGTTGG 395753 Query 154150 TCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCC-GCCG 154208 | | ||| | |||| ||| || | | |||||||| | ||||| || ||| Sbjct 395754 TGCCAGCGATGTATGAGCCGGTGGCACGGATGCGGTGCACGTTCAGACCAATTCCACCCG 395813 Query 154209 CCGTACTTTGATATGGCAGCGC-AGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATC 154267 || | ||| || || ||| | |||| || || || ||||| || ||||| || Sbjct 395814 CCAT-CTTGGAGATCATAGCACAAGTC-TTTAGGGTGTCATAAATGCCCTCAATGCTGTC 395871 Query 154268 GTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAA 154327 || | | ||| | ||| || || ||| || || | | || || || || Sbjct 395872 CTCCTTCATGTCGACGAGGAAGCATGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAA 395931 Query 154328 GAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGC 154387 | ||||| || || || || | || | ||||| | ||| || || ||| | Sbjct 395932 CAATGTGGGGGAGGCATGTGTGAAGAACTTGTTTGACATCAGGTTGTATGTCTCAATGAC 395991 Query 154388 GTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACG 154447 ||||| ||| || || || |||| ||||| ||||||| ||||||||| || || Sbjct 395992 CCTTTCGACATCGTCTCCCCAGATACCGACAGCGACACGCATGATCATGTGCTGTGGCCG 396051 Query 154448 TTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGTAACCGAA 154507 ||| | ||| || || | ||| | ||| ||| | || ||||| ||| | ||||| Sbjct 396052 CTCGACAACTTTACCATCGAGCTTGAGGAGGTATGAACGCTCCAGGGTCTTGAAGCCGAA 396111 Query 154508 ATACTTGTATTCAAAATCTAGCTCATGAGCGATGGCCGCATCGA 154551 ||| | ||| |||| || | || | | | ||||||| |||| Sbjct 396112 ATATTGGTAGCCAAAGTCACGGTCGTAAACAATGGCCGAGTCGA 396155 >seq279 Length=349471 Score = 131 bits (144), Expect = 2e-25 Identities = 348/519 (67%), Gaps = 17/519 (3%) Strand=Plus/Minus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-- 52383 || |||||| | ||||| ||||| | ||||| | ||||||||| || ||| || Sbjct 263131 GTCCCGTGCATCCGCAAGAAGGCCGACTGGGCTCTCAAGTGGATCCAG---GACCGCGAG 263075 Query 52384 -CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442 |||| ||| |||| |||| |||||||| ||||||||| | || || ||| Sbjct 263074 TCCACCTACGCCCAGCGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGC 263015 Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502 || ||| | || || | | || | | ||| | ||||| |||||||| ||| | Sbjct 263014 GCATTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCC 262955 Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAG 52562 |||||| | || || || || || || |||||||| ||||| || || ||| | | Sbjct 262954 AACGAGCTCATTTCTCGTGATGAGGGTCTGCACACCGACTTCGCCTGTCTCCTGTTCTCT 262895 Query 52563 -ACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGT 52621 || | | |||| || | | | | | | ||| | ||| ||| ||||| || Sbjct 262894 CACCTGAGGAACCGTCCAA--GCAAGCAG-CGTG-TCCAGGACATCATCACCGAGGCTGT 262839 Query 52622 GGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGC 52681 || || || |||||||| || || | || ||||| || || || ||||||||| | Sbjct 262838 CGCCATTGAGAAGGAGTTCTTGACCGAGGCTCTGCCATGCGCCCTCCTCGGCATGAACTC 262779 Query 52682 GCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTC-GGGC 52740 | |||| |||||||||||||||| || || ||||| |||| |||| |||| Sbjct 262778 CAACCTCATGAAGCAGTACATCGAGTTTGTTGCCGACCGTCTCCTGGT--CGCTCTGGGC 262721 Query 52741 AGCCA-AAGTACTTCAACGC-TCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGA 52798 | | | ||| | ||| | ||| || || || || || ||| | ||||| || || | Sbjct 262720 AACGAGAAGGTTTACAAGTCGTCG-AACCCCTTCGACTTCATGGAGAACATCTCTCTCGG 262662 Query 52799 GGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||||||||||||| || |||||||| ||||| || || Sbjct 262661 TGGCAAGACCAACTTCTTTGAGAAGCGTGTCGGTGACTA 262623 >seq1 Length=1124325 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||| || | || | | | |||||||| || |||||||||||| Sbjct 67694 CCACCGCGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 67635 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||||||| || || |||| |||| |||||||| ||||| || || Sbjct 67634 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGA 67575 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || || | ||||| | | |||||||| |||||||| Sbjct 67574 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGT-CGATGGTGTCGGAAGACTCCAC 67516 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || || || || || || || || || ||||||||| Sbjct 67515 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATG 67467 >seq512 Length=287951 Score = 102 bits (112), Expect = 8e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || |||||||||||| | || ||| |||||||| || || || | | Sbjct 18216 GATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGCCCATCCTCGAGCTGCTTTCCAGCA 18275 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| |||||||| ||||| || || || || || ||||| ||| || || | | Sbjct 18276 AAGATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACA 18335 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||| | ||||| ||||||| || | || || ||||||||||| || Sbjct 18336 TTG-TCGATGGTGTCTGAGGACTCGACCTCGAGGGTAATGGTCTTGCCAGTCAGAGTCTT 18394 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 18395 GACGAAGATCTGCAT 18409 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||| | || | ||| | | | |||||||||||||||||||||||| Sbjct 18411 CCGCCACGAAGACGGAGGACGAGATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAG 18470 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||||||| || || |||| | |||| || ||||| ||||| || || Sbjct 18471 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCAGGGGGG 18530 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | || | ||| |||| ||||| ||| Sbjct 18531 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGGAGGACTCGACC 18590 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGG 138616 || | || | || || || || || || || || || |||||||||| Sbjct 18591 TCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATGG 18639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496256289769200