Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq334 230 3e-55 >seq334 Length=742376 Score = 230 bits (254), Expect = 3e-55 Identities = 1189/1868 (64%), Gaps = 69/1868 (4%) Strand=Plus/Plus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 ||||||| |||||| || |||| | |||||||||||||| || |||||||| | Sbjct 394293 TGAACTGGATGGGTGCGGCAGCTGCCTGGGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 394352 Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTC-CATG 115644 | |||||||| | | ||||| || | |||| | || ||| || | |||| Sbjct 394353 CGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATTGATGG-CTCCCTCATG 394411 Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704 || ||| | | || |||||||| |||||| || || || || ||||| | | Sbjct 394412 TGGATGTTTAGAGACTGAGATTGATCAATGAAGGCACCACGGTCAGCAGCCATCTG---C 394468 Query 115705 ACATCCTTCATCTT---GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 115761 ||| || ||| ||| ||||| || || |||||||| ||| |||||| | ||| Sbjct 394469 ACAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATATCAGCCGGG 394528 Query 115762 ATATCCACGA-TATTTTGGATAGAGCCACCTGCCTTGACCATGAGA---TCCTTCATATC 115817 || | | || | || || || || ||| | || | | |||| | | |||||| | Sbjct 394529 ATG-CTAGGAATGTTCTGAATGGAACCATC---CTCGGCGATGATACGGTTCTTCATGGC 394584 Query 115818 CTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTA---TTGACAACAAC 115874 || ||||| | || | || | |||||| |||| || | ||||| || Sbjct 394585 CTCAGACCACAAGCCGAGCTCTGTCAGATCCCT---GAGGAGCCAAGGGTTGACGACCTG 394641 Query 115875 AAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTC 115934 ||||| || ||||| |||| | | |||||||||| |||||||||||||||||||| Sbjct 394642 GAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCACTC 394701 Query 115935 ATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994 |||||| |||| |||||| | || || || |||||||| ||||||| | | |||||| Sbjct 394702 ATTGTTGCCCAGGATTTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGCAACAAGCTGTT 394761 Query 115995 GCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGT 116054 ||| | ||| | || | || ||||| || || |||||||| || | | Sbjct 394762 GCGAACACCAGTCTCCTTGATCTTCTCCTTCAGTGCATCCCAGTCCCAGAGGTCGGAGGG 394821 Query 116055 CTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGT 116114 || | | |||||| || ||||| ||||| ||||| || | || ||||| |||| Sbjct 394822 CTTGACATTCCACATGTCGAACTGCAGGATGCCTTGCGAGACGGGGCTGCCCTCGTATGT 394881 Query 116115 CTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 116174 || || |||||||| |||| || | || || |||||| ||||| || || Sbjct 394882 CTTGTAGGGGCCCTCCACCTTGGCAATGTCACTTGATGCAGTGAGGGCAGCGTGGTAGAT 394941 Query 116175 TGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACG--G 116232 ||||| || || | |||| | |||||| ||| || || | | || | Sbjct 394942 GGTCTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCTGGGGAGTCGAAAGGTATGCGCAG 395001 Query 116233 CACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 116292 | || ||| | || || ||||| || ||||||| ||||| || || || | ||| Sbjct 395002 TGCCAA--GAATGCGTCGGCAAGACCCTGAACACCGACACCAATAGGTCGGTGCCGCATG 395059 Query 116293 TTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 116349 || || | | || |||| || || || || ||| || | | | || | Sbjct 395060 TT--GCTGTTG-TAGGCCTCCTTGACCGGGTAGTGGTTGACATCAATGATCTTGTTCAAG 395116 Query 116350 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT 116409 || | ||| |||| || | || || | || | | | | | | | | || Sbjct 395117 TTGCGGACGACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCAGTTGTTGTCG 395176 Query 116410 TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 116469 | | ||||| || || || || || |||| || ||||| | | |||||| Sbjct 395177 TAGTCAACATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACACCGCGACCTCATCTGGG 395236 Query 116470 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 116529 ||| |||||| || || || || || | ||| || || ||||| |||| |||||| Sbjct 395237 GCAGAGTACTCAATGATCTCAGTGCAAAGATTGGAGCTTCGGATGGTACCCAGGTTCTTC 395296 Query 116530 TGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTT 116589 || || ||| ||| |||||||| ||||| | || | || ||||| || Sbjct 395297 TGGTTGCTCTTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTC 395356 Query 116590 TGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTG---GCTCG 116645 |||| || |||||| || | ||||| | || | ||| || ||| ||| | || Sbjct 395357 TGGGCCTCGAGAATGGCATACCATAGCTTCTG-GGCCTTCA---TGGTCTTGCGACCACG 395412 Query 116646 CCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGA 116704 ||||||| |||||||| |||||| ||||||||||| ||| || ||| || | || Sbjct 395413 ACCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCAAACTCCTCA-CCGTAGCAGTCGGCGA 395471 Query 116705 GCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCA 116764 | || || || | || || | || | ||| | ||| || ||| |||||||||| Sbjct 395472 GGCCAGGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCA 395531 Query 116765 TGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC 116824 |||| || || || |||||||| || ||| ||||| || || || || | | Sbjct 395532 TGAAAAGATCGGGAATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTAC 395591 Query 116825 CCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACA 116884 | ||||| |||| || | ||| || | || ||| |||||||| || || ||||| | Sbjct 395592 CGTGATTCTTGCGCAGGTCAAGAAACTCGAAGACATCGGCGTGCCATGGCTCAAGGTAGA 395651 Query 116885 CCGCGATTGACCCCTTGCGACG------ACCAGCCTGGTTTACATACCTCGCCGTTGCGT 116938 |||| | || | |||| ||| |||||| || || | || || || Sbjct 395652 TAGCGAAGGCACC---GGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGT 395708 Query 116939 TAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACG 116996 | || || || |||||||| |||| |||| ||| || || || || ||| || | Sbjct 395709 TGAAGACCCGCAGCATTGGGGTGATGCCATTAGAGGTACCGTTGGTGCCAGCGATGTATG 395768 Query 116997 AGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGAT 117056 || | | |||| | || ||| | || || |||||| || || ||| ||| ||||| Sbjct 395769 AGCC--GGTGGCACGGATGCGGTGCACGTTCAGACCAATTCCACCCGCCATCTTGGAGAT 395826 Query 117057 TTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGAT 117116 || || | | || || | || || || || || ||| |||| | ||| Sbjct 395827 CATAGCACAAGTCTTTAGGGTGTCATAAATGCCCTCAATGCTGTCCTCCTTCATGTCGAC 395886 Query 117117 GAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGC 117176 ||||||||| |||| || ||| || || ||||| ||||| | || || | || Sbjct 395887 GAGGAAGCATGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAACAATGTGGGGGAGGC 395946 Query 117177 GTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGAC---AGAGGGAATGT 117232 || |||| | || | | |||||| | ||| ||||| | ||| | | || Sbjct 395947 ATGTGTGAAGA-ACTTGTTTGACATCAGGTTGTATGTCTCAATGACCCTTTCGACATCGT 396005 Query 117233 CTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGA 117292 || ||| | ||||||| | ||| ||||| | ||||| || || || | | Sbjct 396006 CTCCCCAG---ATACCGACAGCGACACGCATGATCATGTGCTGTGGCCGCTCGACAACTT 396062 Query 117293 TACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAA------TAGC 117346 ||||||||||| | ||||||| ||||| |||||||| || ||| |||| Sbjct 396063 TACCATCGAGCTTGAGGAGGTATGAACGCTCCAGGGTCTTGAAGCCGAAATATTGGTAGC 396122 Query 117347 CAAAGTCA 117354 |||||||| Sbjct 396123 CAAAGTCA 396130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613499646192600