Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq334 230 3e-55
>seq334
Length=742376
Score = 230 bits (254), Expect = 3e-55
Identities = 1189/1868 (64%), Gaps = 69/1868 (4%)
Strand=Plus/Plus
Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585
||||||| |||||| || |||| | |||||||||||||| || |||||||| |
Sbjct 394293 TGAACTGGATGGGTGCGGCAGCTGCCTGGGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 394352
Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTC-CATG 115644
| |||||||| | | ||||| || | |||| | || ||| || | ||||
Sbjct 394353 CGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATTGATGG-CTCCCTCATG 394411
Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704
|| ||| | | || |||||||| |||||| || || || || ||||| | |
Sbjct 394412 TGGATGTTTAGAGACTGAGATTGATCAATGAAGGCACCACGGTCAGCAGCCATCTG---C 394468
Query 115705 ACATCCTTCATCTT---GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 115761
||| || ||| ||| ||||| || || |||||||| ||| |||||| | |||
Sbjct 394469 ACAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATATCAGCCGGG 394528
Query 115762 ATATCCACGA-TATTTTGGATAGAGCCACCTGCCTTGACCATGAGA---TCCTTCATATC 115817
|| | | || | || || || || ||| | || | | |||| | | |||||| |
Sbjct 394529 ATG-CTAGGAATGTTCTGAATGGAACCATC---CTCGGCGATGATACGGTTCTTCATGGC 394584
Query 115818 CTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTA---TTGACAACAAC 115874
|| ||||| | || | || | |||||| |||| || | ||||| ||
Sbjct 394585 CTCAGACCACAAGCCGAGCTCTGTCAGATCCCT---GAGGAGCCAAGGGTTGACGACCTG 394641
Query 115875 AAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTC 115934
||||| || ||||| |||| | | |||||||||| ||||||||||||||||||||
Sbjct 394642 GAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCACTC 394701
Query 115935 ATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994
|||||| |||| |||||| | || || || |||||||| ||||||| | | ||||||
Sbjct 394702 ATTGTTGCCCAGGATTTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGCAACAAGCTGTT 394761
Query 115995 GCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGT 116054
||| | ||| | || | || ||||| || || |||||||| || | |
Sbjct 394762 GCGAACACCAGTCTCCTTGATCTTCTCCTTCAGTGCATCCCAGTCCCAGAGGTCGGAGGG 394821
Query 116055 CTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGT 116114
|| | | |||||| || ||||| ||||| ||||| || | || ||||| ||||
Sbjct 394822 CTTGACATTCCACATGTCGAACTGCAGGATGCCTTGCGAGACGGGGCTGCCCTCGTATGT 394881
Query 116115 CTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 116174
|| || |||||||| |||| || | || || |||||| ||||| || ||
Sbjct 394882 CTTGTAGGGGCCCTCCACCTTGGCAATGTCACTTGATGCAGTGAGGGCAGCGTGGTAGAT 394941
Query 116175 TGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACG--G 116232
||||| || || | |||| | |||||| ||| || || | | || |
Sbjct 394942 GGTCTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCTGGGGAGTCGAAAGGTATGCGCAG 395001
Query 116233 CACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 116292
| || ||| | || || ||||| || ||||||| ||||| || || || | |||
Sbjct 395002 TGCCAA--GAATGCGTCGGCAAGACCCTGAACACCGACACCAATAGGTCGGTGCCGCATG 395059
Query 116293 TTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 116349
|| || | | || |||| || || || || ||| || | | | || |
Sbjct 395060 TT--GCTGTTG-TAGGCCTCCTTGACCGGGTAGTGGTTGACATCAATGATCTTGTTCAAG 395116
Query 116350 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT 116409
|| | ||| |||| || | || || | || | | | | | | | | ||
Sbjct 395117 TTGCGGACGACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCAGTTGTTGTCG 395176
Query 116410 TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 116469
| | ||||| || || || || || |||| || ||||| | | ||||||
Sbjct 395177 TAGTCAACATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACACCGCGACCTCATCTGGG 395236
Query 116470 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 116529
||| |||||| || || || || || | ||| || || ||||| |||| ||||||
Sbjct 395237 GCAGAGTACTCAATGATCTCAGTGCAAAGATTGGAGCTTCGGATGGTACCCAGGTTCTTC 395296
Query 116530 TGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTT 116589
|| || ||| ||| |||||||| ||||| | || | || ||||| ||
Sbjct 395297 TGGTTGCTCTTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTC 395356
Query 116590 TGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTG---GCTCG 116645
|||| || |||||| || | ||||| | || | ||| || ||| ||| | ||
Sbjct 395357 TGGGCCTCGAGAATGGCATACCATAGCTTCTG-GGCCTTCA---TGGTCTTGCGACCACG 395412
Query 116646 CCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGA 116704
||||||| |||||||| |||||| ||||||||||| ||| || ||| || | ||
Sbjct 395413 ACCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCAAACTCCTCA-CCGTAGCAGTCGGCGA 395471
Query 116705 GCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCA 116764
| || || || | || || | || | ||| | ||| || ||| ||||||||||
Sbjct 395472 GGCCAGGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCA 395531
Query 116765 TGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC 116824
|||| || || || |||||||| || ||| ||||| || || || || | |
Sbjct 395532 TGAAAAGATCGGGAATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTAC 395591
Query 116825 CCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACA 116884
| ||||| |||| || | ||| || | || ||| |||||||| || || ||||| |
Sbjct 395592 CGTGATTCTTGCGCAGGTCAAGAAACTCGAAGACATCGGCGTGCCATGGCTCAAGGTAGA 395651
Query 116885 CCGCGATTGACCCCTTGCGACG------ACCAGCCTGGTTTACATACCTCGCCGTTGCGT 116938
|||| | || | |||| ||| |||||| || || | || || ||
Sbjct 395652 TAGCGAAGGCACC---GGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGT 395708
Query 116939 TAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACG 116996
| || || || |||||||| |||| |||| ||| || || || || ||| || |
Sbjct 395709 TGAAGACCCGCAGCATTGGGGTGATGCCATTAGAGGTACCGTTGGTGCCAGCGATGTATG 395768
Query 116997 AGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGAT 117056
|| | | |||| | || ||| | || || |||||| || || ||| ||| |||||
Sbjct 395769 AGCC--GGTGGCACGGATGCGGTGCACGTTCAGACCAATTCCACCCGCCATCTTGGAGAT 395826
Query 117057 TTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGAT 117116
|| || | | || || | || || || || || ||| |||| | |||
Sbjct 395827 CATAGCACAAGTCTTTAGGGTGTCATAAATGCCCTCAATGCTGTCCTCCTTCATGTCGAC 395886
Query 117117 GAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGC 117176
||||||||| |||| || ||| || || ||||| ||||| | || || | ||
Sbjct 395887 GAGGAAGCATGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAACAATGTGGGGGAGGC 395946
Query 117177 GTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGAC---AGAGGGAATGT 117232
|| |||| | || | | |||||| | ||| ||||| | ||| | | ||
Sbjct 395947 ATGTGTGAAGA-ACTTGTTTGACATCAGGTTGTATGTCTCAATGACCCTTTCGACATCGT 396005
Query 117233 CTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGA 117292
|| ||| | ||||||| | ||| ||||| | ||||| || || || | |
Sbjct 396006 CTCCCCAG---ATACCGACAGCGACACGCATGATCATGTGCTGTGGCCGCTCGACAACTT 396062
Query 117293 TACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAA------TAGC 117346
||||||||||| | ||||||| ||||| |||||||| || ||| ||||
Sbjct 396063 TACCATCGAGCTTGAGGAGGTATGAACGCTCCAGGGTCTTGAAGCCGAAATATTGGTAGC 396122
Query 117347 CAAAGTCA 117354
||||||||
Sbjct 396123 CAAAGTCA 396130
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613499646192600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |