Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq334 127 3e-24
>seq334
Length=742376
Score = 127 bits (140), Expect = 3e-24
Identities = 407/612 (67%), Gaps = 22/612 (4%)
Strand=Plus/Plus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAG--GCCTGCTT-CTCAGATAGTACAT 203895
|| ||| || |||||||| |||| || | ||||| ||||| | | || ||||||||
Sbjct 394282 CTGGTCGACAGTGAACTGGATGG-GTGC--GGCAGCTGCCTGGGTGCGGAGGTAGTACAT 394338
Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955
||| ||||| || || || ||| ||| | ||||||| | | |||| || ||
Sbjct 394339 GCCAGTCTTGAGACCGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCA--TT 394396
Query 203956 G--GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATC 204012
| || || |||||| ||||| |||||||| ||| || ||| ||||| || || ||
Sbjct 394397 GATGGCTCCCTCATGTGGATGTTTAGAGACTGAGATTGATCAATG-AAGGCACCACGGTC 394455
Query 204013 TGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCT 204072
|| ||||| | | ||||||| |||| || |||||||| || |||||| | | | | |
Sbjct 394456 AGCAGCCATCTGCACAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTT 394515
Query 204073 GGTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCA 204131
| | | || | || | || ||| || || || | ||||| || | |
Sbjct 394516 GATATCAGCCGGGA-TGCTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGATACGGT 394574
Query 204132 TCCTCGTCTCCTCCCCCCACATGCCCAAC-CTGATCAGCTCCCGCACCAGGTGGGGGTTG 204190
|| || | |||| ||||| ||| | | ||| |||| |||| | || ||||||
Sbjct 394575 TCTTCATGGCCTCAGACCACAAGCCGAGCTCTG-TCAGATCCCTGAGGAGCCAAGGGTTG 394633
Query 204191 ATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCG 204250
| || ||| || || || | ||||| | ||| | | | |||| |||| |||| ||
Sbjct 394634 ACGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCA 394693
Query 204251 AACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGC 204310
|| ||| |||||||| | || || | || || |||||||| || ||||| | |
Sbjct 394694 AAGCACTCATTGTTGCCCAGGATTTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGCAAC 394753
Query 204311 AGGGAGTTGCGCACACC-GTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCA- 204368
| | |||||| ||||| || | || || | | |||||| | |||||| |
Sbjct 394754 AAGCTGTTGCGAACACCAGTCTCCTT-GATCTTCTCCTTCAGTGCATCCCAGTCCCAGAG 394812
Query 204369 -TCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTG 204427
||| | ||| || || ||||||||||||||| | ||||||||| ||| ||||||
Sbjct 394813 GTCGGA--GGGCTTGACATTCCACATGTCGAACTGCAGGATGCCTTGCGAGACGGGGCTG 394870
Query 204428 CCCTTGTACGTC 204439
|||| ||| |||
Sbjct 394871 CCCTCGTATGTC 394882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795145409651600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |