Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq734 282 5e-71 seq42 105 8e-18 >seq734 Length=233485 Score = 282 bits (312), Expect = 5e-71 Identities = 476/686 (69%), Gaps = 6/686 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || || ||||||| ||| || || || ||||| | ||||| || |||||||| Sbjct 195830 TCGAAGTCCTCGCCACCCAGGTGAGTGTCACCGGCGGTGGACTTGACCTCGAAGATACCC 195889 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | | ||| ||||| || ||||||||||||||||| || || || ||| Sbjct 195890 TCCTCGATGGTCAGGAGCGAGACATCGAAAGTACCACCACCCAGGTCGAAGATCAGGACG 195949 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || ||||| |||||||| || || || ||||| || || || || Sbjct 195950 TTGCGCTCGCCCTCGACCTTCTTGTCGAGACCATAGGCAATGGCCGCGGCAGTAGGCTCG 196009 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| | | |||||||||||||||| | || || || || ||||| || Sbjct 196010 TTGATGATACGCAAAACGTTCAGGCCAGCAATAAGACCAGCGTCCTTGGTTGCTTGACGC 196069 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| |||||||| |||||||| | ||| |||| |||| | ||| || Sbjct 196070 TGAGAGTCGTTGAAGTAGGCGGGGACCGTGATGACAGCGTTGTTGACGGTGCCACCCAGG 196129 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || ||| | || ||| ||||| || ||||| || |||||||| || | | Sbjct 196130 TAGGACTCAGCGGTCTCACGCATCTTGGTGAGGACCATGGAGGAAATCTCCTCTGGGGTG 196189 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 || || || || || || || ||||| || || |||| || |||| | | Sbjct 196190 AAGGTCTTGGTCTCGCCCTTGAACTCAACCTCGATGTTGGGCTT-GCCGC--CCTTCTCG 196246 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 || | ||| | | | | ||||| ||| | ||||||| |||| ||||| | Sbjct 196247 ATGATCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGAGTCCTGGAACTTGCGG 196306 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 || || | ||||| ||||| || || ||||| | |||||||||||| |||||||| Sbjct 196307 CCAATCAACCGCTTCGCATCGAAGACGGTGTTGTGGGGGTTCATGGCGACCTGGTTCTTG 196366 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || ||||| || || || | | || || || ||||| | || ||||| || Sbjct 196367 GCGGCATCTCCGATCAGGCGCTC---AGTGTCGGTGAAAGCGACAAAGGAAGGGGTGGTC 196423 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 || || || |||||||| || || || || | |||||| | | |||| || || || Sbjct 196424 CGGTTTCCCTGGTCGTTGGCGATGATCTCAATGCGGTCATCACGGAAGACACCCACACAA 196483 Query 8117 GAATACGTTGTTCCTAAATCAATACC 8142 || || || || || ||||||||||| Sbjct 196484 GAGTAGGTGGTACCCAAATCAATACC 196509 >seq42 Length=142415 Score = 105 bits (116), Expect = 8e-18 Identities = 235/353 (67%), Gaps = 0/353 (0%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||| | || || || || || || || ||| || |||| || Sbjct 34703 TCGAAGTCCTCACCACCAAGATGGGTGTCACCGGCAGTAGCCAAGACCTCGAAGACGCCC 34644 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | || || ||||| || ||||||||||| || || | | || | Sbjct 34643 TGGTCGATAGAGAGCAGGGATACATCGAAGGTACCACCACCAAGATCGTAGACGATGATC 34584 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | ||| | || | | |||| || ||||| || |||||||| || ||||| || ||| Sbjct 34583 TGACGCTCGCCCTCCTCGGTCTTGTCCAGACCATATGCGATAGCAGCGGCCGTGGGCTCA 34524 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | |||||| || ||| || || || ||| | | ||||| || || || || || Sbjct 34523 TTGACAATACGGAGGACGTTGAGACCGGCGATAATGCCGGCATCCTTGGTAGCCTGGCGC 34464 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || ||||| ||||| || ||||| || || || |||| ||||| |||| ||||| Sbjct 34463 TGGTTGTCGTTGAAGTACGCGGGGACGGTAACAACGGCGTGGGTGACCTTCTCGCCGAGG 34404 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || || || | || ||||| ||| || | ||| | || ||||| || Sbjct 34403 TAGTTCTCGGCCACTTCCTTCATCTTGCCCAGGATCATGGCGGAGATCTCCTC 34351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635124979927400