Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq734 282 5e-71
seq42 105 8e-18
>seq734
Length=233485
Score = 282 bits (312), Expect = 5e-71
Identities = 476/686 (69%), Gaps = 6/686 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || || ||||||| ||| || || || ||||| | ||||| || ||||||||
Sbjct 195830 TCGAAGTCCTCGCCACCCAGGTGAGTGTCACCGGCGGTGGACTTGACCTCGAAGATACCC 195889
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || ||| | | | ||| ||||| || ||||||||||||||||| || || || |||
Sbjct 195890 TCCTCGATGGTCAGGAGCGAGACATCGAAAGTACCACCACCCAGGTCGAAGATCAGGACG 195949
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | || ||||| |||||||| || || || ||||| || || || ||
Sbjct 195950 TTGCGCTCGCCCTCGACCTTCTTGTCGAGACCATAGGCAATGGCCGCGGCAGTAGGCTCG 196009
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || ||||| | | |||||||||||||||| | || || || || ||||| ||
Sbjct 196010 TTGATGATACGCAAAACGTTCAGGCCAGCAATAAGACCAGCGTCCTTGGTTGCTTGACGC 196069
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| || ||||| |||||||| |||||||| | ||| |||| |||| | ||| ||
Sbjct 196070 TGAGAGTCGTTGAAGTAGGCGGGGACCGTGATGACAGCGTTGTTGACGGTGCCACCCAGG 196129
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| || || ||| | || ||| ||||| || ||||| || |||||||| || | |
Sbjct 196130 TAGGACTCAGCGGTCTCACGCATCTTGGTGAGGACCATGGAGGAAATCTCCTCTGGGGTG 196189
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876
|| || || || || || || ||||| || || |||| || |||| | |
Sbjct 196190 AAGGTCTTGGTCTCGCCCTTGAACTCAACCTCGATGTTGGGCTT-GCCGC--CCTTCTCG 196246
Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936
|| | ||| | | | | ||||| ||| | ||||||| |||| ||||| |
Sbjct 196247 ATGATCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGAGTCCTGGAACTTGCGG 196306
Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996
|| || | ||||| ||||| || || ||||| | |||||||||||| ||||||||
Sbjct 196307 CCAATCAACCGCTTCGCATCGAAGACGGTGTTGTGGGGGTTCATGGCGACCTGGTTCTTG 196366
Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056
|| || || ||||| || || || | | || || || ||||| | || ||||| ||
Sbjct 196367 GCGGCATCTCCGATCAGGCGCTC---AGTGTCGGTGAAAGCGACAAAGGAAGGGGTGGTC 196423
Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116
|| || || |||||||| || || || || | |||||| | | |||| || || ||
Sbjct 196424 CGGTTTCCCTGGTCGTTGGCGATGATCTCAATGCGGTCATCACGGAAGACACCCACACAA 196483
Query 8117 GAATACGTTGTTCCTAAATCAATACC 8142
|| || || || || |||||||||||
Sbjct 196484 GAGTAGGTGGTACCCAAATCAATACC 196509
>seq42
Length=142415
Score = 105 bits (116), Expect = 8e-18
Identities = 235/353 (67%), Gaps = 0/353 (0%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||| | || || || || || || || ||| || |||| ||
Sbjct 34703 TCGAAGTCCTCACCACCAAGATGGGTGTCACCGGCAGTAGCCAAGACCTCGAAGACGCCC 34644
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|| || | || || ||||| || ||||||||||| || || | | || |
Sbjct 34643 TGGTCGATAGAGAGCAGGGATACATCGAAGGTACCACCACCAAGATCGTAGACGATGATC 34584
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
| ||| | || | | |||| || ||||| || |||||||| || ||||| || |||
Sbjct 34583 TGACGCTCGCCCTCCTCGGTCTTGTCCAGACCATATGCGATAGCAGCGGCCGTGGGCTCA 34524
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| | |||||| || ||| || || || ||| | | ||||| || || || || ||
Sbjct 34523 TTGACAATACGGAGGACGTTGAGACCGGCGATAATGCCGGCATCCTTGGTAGCCTGGCGC 34464
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| ||||| ||||| || ||||| || || || |||| ||||| |||| |||||
Sbjct 34463 TGGTTGTCGTTGAAGTACGCGGGGACGGTAACAACGGCGTGGGTGACCTTCTCGCCGAGG 34404
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809
|| || || | || ||||| ||| || | ||| | || ||||| ||
Sbjct 34403 TAGTTCTCGGCCACTTCCTTCATCTTGCCCAGGATCATGGCGGAGATCTCCTC 34351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635124979927400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |