Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq334 244 1e-59 seq279 104 3e-17 >seq334 Length=742376 Score = 244 bits (270), Expect = 1e-59 Identities = 1177/1848 (64%), Gaps = 55/1848 (3%) Strand=Plus/Minus Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTCTTGATG 111605 ||||| || |||||||||| ||| ||||||| | || |||||| | | Sbjct 396114 TATTTCGGCTTCAAGACCCTGGAGCGTTCATACCTCCTCAAGCTCGATGGTAAAGTTGTC 396055 Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 || |||||| ||||| ||||||| ||||| |||||||| || || ||| | || Sbjct 396054 GAGCGGCCACAGCACATGATCATGCGTGTCGCTGTCGGTATCTGGGGAGACGATGTCGAA 395995 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACC 111725 || | ||||||||| || |||||| | |||| || || | || || Sbjct 395994 AGGGTCATTGAGACATACAACCTGATGTCAAACAAGTTCTTCACACATGCCTCCCCCACA 395935 Query 111726 CTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAG 111785 | ||||| ||||| || || ||||| |||| || ||||| | | | ||| Sbjct 395934 TTGTTCAATGCTGGCACTCCCCAGCCCCAGCTGTCATCATGCTTCCTCGTCGACATGAAG 395875 Query 111786 GAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGG 111845 ||||| || | |||||||| | ||| || | ||||| ||||| ||| | Sbjct 395874 GAGGACAGCATTGAGGGCATTTATGACACCCTAAAGACTTGTGCTATGATCTCCAAGATG 395815 Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-G 111903 || ||||| || || || || | || || | |||| | | ||| || | | | Sbjct 395814 GCGGGTGGAATTGGTCTGAACGTGCACCGCATCCGTGCCACC--GGCTCATACATCGCTG 395757 Query 111904 GTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963 | || || ||| || |||| || | |||||||| || || || ||| ||| || | Sbjct 395756 GCACCAACGGTACCTCTAATGGCATCACCCCAATGCTGCGGGTCTTCAACAACACCGCCC 395697 Query 111964 GCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGC 112017 | || || |||| | ||| ||||| | || | |||| |||| ||||||| Sbjct 395696 GATACGTCGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTCGCTATCTACCTTGAGC 395640 Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077 |||||||||| ||| || | ||||| ||||| |||| || || ||| | |||||| Sbjct 395639 CATGGCACGCCGATGTCTTCGAGTTTCTTGACCTGCGCAAGAATCACGGTAAGGAGGAGA 395580 Query 112078 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 112137 || ||| ||||| ||| || ||||||||||| ||||| ||||||||| | || | Sbjct 395579 TCCGAGCCCGTGATCTTTTCCTTGCCCTCTGGATTCCCGATCTTTTCATGAAGCGGGTCG 395520 Query 112138 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCG 112197 || ||| || | ||| | || | || || || || || || ||| |||| | Sbjct 395519 AGAAGAACGGTGACTGGACCCTGATGTGCCCTAACGAGTGTCCTGGCCTCGCCGACTGCT 395460 Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC-- 112255 |||||||||||||| || |||||| |||||||| | || |||| | | | || Sbjct 395459 ACGGTGAGGAGTTTGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGTCGTG-GTC-GCAA 395402 Query 112256 GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314 ||| || || | || | | ||| | || |||||| || | || || |||||||| | Sbjct 395401 GACCATG-AAGGCCCAGAAGCTATGGTATGCCATTCTCGAGGCCCAGACTGAGACTGGCA 395343 Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 112374 || | ||||| ||||| ||| | |||| ||||| || || ||||| ||||| Sbjct 395342 ACCCCTTCATGCTGTACAAGGACCACGCCAACCGGAAGAGCAACCAGAAGAACCTGGGTA 395283 Query 112375 TGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 112434 ||| || ||||| || || || || ||| | || | | | | ||||||| | Sbjct 395282 CCATCCGAAGCTCCAATCTTTGCACTGAGATCATTGAGTACTCTGCCCCAGATGAGGTCG 395223 Query 112435 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC-- 112492 | ||||| ||| | || || || ||||| ||| ||||| || | ||||| || Sbjct 395222 CGGTGTGCAACTTGGCCTCCATTGCTCTGCCCGCATATGTTGA--CTACGACAACAACTG 395165 Query 112493 ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGT 112552 | | | | | | ||||| ||||| | ||| ||| | |||| | Sbjct 395164 CTACAACTTCCAGCAGTTGCACGAGGTTACCCAGGTCGTCGTCCGCAACTTGAACAAGAT 395105 Query 112553 TATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 112612 |||||| || ||||| || || || || || ||| | ||||| || Sbjct 395104 CATTGATGTCAACCACTACCCGGTCAAGGAGGCCTACAACAGCAACATGCGGCACCGACC 395045 Query 112613 AATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCA----- 112667 |||||| ||||||| || ||||| || || | |||| ||| | | |||| Sbjct 395044 TATTGGTGTCGGTGTTCAGGGTCTTGCCGACGCATTC-----TTGGCACTGCGCATACCT 394990 Query 112668 TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCC 112727 || || ||| || || || | || || || || ||||| || || ||||| Sbjct 394989 TTCGACTCCCCAGAGGCCCGTGAGCTGAACAAGCAGATCTTCGAGACCATCTACCACGCT 394930 Query 112728 GCTCT---TGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 112784 || || || | ||| || | || |||| || || || || | || | ||| Sbjct 394929 GCCCTCACTGCATCAAGT---GACATTGCCAAGGTGGAGGGCCCCTACAAGACATACGAG 394873 Query 112785 GGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTT 112844 || || | || ||||| | || || || || |||||| | | || || Sbjct 394872 GGCAGCCCCGTCTCGCAAGGCATCCTGCAGTTCGACATGTGGAATGTCAAGCCCTCCGAC 394813 Query 112845 CACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 112904 | || |||||||| || || ||||| |||||||||| ||| |||| ||||| | Sbjct 394812 CTCTGGGACTGGGATGCACTGAAGGAGAAGATCAAGGAGACTGGTGTTCGCAACAGCTTG 394753 Query 112905 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 112964 ||| ||||||||||||| || || || || | |||||| |||| || ||||| |||||| Sbjct 394752 TTGCTGGCACCAATGCCCACTGCTTCGACGTCGCAAATCCTGGGCAACAATGAGTGCTTT 394693 Query 112965 GAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTC 113024 || || ||||| | |||||||| | | || | ||||| || ||||| | | ||| Sbjct 394692 GAGCCATACACCTCCAACATCTACCAGCGACGTGTGCTCGCTGGCGAGTTCCAGGTCGTC 394633 Query 113025 AAC---AAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 113081 ||| || ||| |||| || | |||| | || | ||||| ||| |||||| Sbjct 394632 AACCCTTGGCTCCTCAGGGAT---CTGACAGAGCTCGGCTTGTGGTCTGAGGCCATGAAG 394576 Query 113082 GATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATT 113141 | | || | | || |||||||||||| || ||| || || | ||| || Sbjct 394575 AACCGTATCATCGCCGAGGATGGTTCCATTCAGAACATTCCTAGCATCCCGGCTGATATC 394516 Query 113142 AAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTG---ACATGGCC 113198 ||| | ||| || || ||||| ||| | |||| ||||| | ||||| Sbjct 394515 AAGGCCCTCTACAAGACCGTCTGGGAGATCTCTCAG-AGGA--CCATTGTGCAGATGGCT 394459 Query 113199 GCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATG-GAAAGTCC 113257 || || |||||| ||||||||||||| ||| | | || | |||| | || || Sbjct 394458 GCTGACCGTGGTGCCTTCATTGATCAATCTCAGTCTCTAAACATCCACATGAGGGAG-CC 394400 Query 113258 AACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGG 113317 | | ||| |||| || | |||||| | | | |||||| |||||||| || || Sbjct 394399 ATCAATGGGCAAGATCACCAGCATGCACTTCGCCGGCTGGAAGCTCGGTCTCAAGACTGG 394340 Query 113318 GATGTATTACCTCCGATCTAAGGCAAAGGCGCGC-CCAATTCAGTTCA 113364 ||||| |||||||| | ||||| || ||| || || ||||||| Sbjct 394339 CATGTACTACCTCCGCACCCAGGCAGCTGC-CGCACCCATCCAGTTCA 394293 >seq279 Length=349471 Score = 104 bits (114), Expect = 3e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 102181 AGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTA 102240 ||||||| | || || || || ||||| ||||||||| ||| | ||| | ||| Sbjct 263061 AGCGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGCGCATTCGCCTCTA 263002 Query 102241 TTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCT 102300 ||| |||||||||||||| || |||||||| || || ||||||||||||||| || | Sbjct 263001 TTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCCAACGAGCTCATTT 262942 Query 102301 CTCGTGACGAGGGACTCCAC 102320 ||||||| ||||| || ||| Sbjct 262941 CTCGTGATGAGGGTCTGCAC 262922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620734757109200