Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq334 244 1e-59
seq279 104 3e-17
>seq334
Length=742376
Score = 244 bits (270), Expect = 1e-59
Identities = 1177/1848 (64%), Gaps = 55/1848 (3%)
Strand=Plus/Minus
Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTCTTGATG 111605
||||| || |||||||||| ||| ||||||| | || |||||| | |
Sbjct 396114 TATTTCGGCTTCAAGACCCTGGAGCGTTCATACCTCCTCAAGCTCGATGGTAAAGTTGTC 396055
Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665
|| |||||| ||||| ||||||| ||||| |||||||| || || ||| | ||
Sbjct 396054 GAGCGGCCACAGCACATGATCATGCGTGTCGCTGTCGGTATCTGGGGAGACGATGTCGAA 395995
Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACC 111725
|| | ||||||||| || |||||| | |||| || || | || ||
Sbjct 395994 AGGGTCATTGAGACATACAACCTGATGTCAAACAAGTTCTTCACACATGCCTCCCCCACA 395935
Query 111726 CTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAG 111785
| ||||| ||||| || || ||||| |||| || ||||| | | | |||
Sbjct 395934 TTGTTCAATGCTGGCACTCCCCAGCCCCAGCTGTCATCATGCTTCCTCGTCGACATGAAG 395875
Query 111786 GAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGG 111845
||||| || | |||||||| | ||| || | ||||| ||||| ||| |
Sbjct 395874 GAGGACAGCATTGAGGGCATTTATGACACCCTAAAGACTTGTGCTATGATCTCCAAGATG 395815
Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-G 111903
|| ||||| || || || || | || || | |||| | | ||| || | | |
Sbjct 395814 GCGGGTGGAATTGGTCTGAACGTGCACCGCATCCGTGCCACC--GGCTCATACATCGCTG 395757
Query 111904 GTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963
| || || ||| || |||| || | |||||||| || || || ||| ||| || |
Sbjct 395756 GCACCAACGGTACCTCTAATGGCATCACCCCAATGCTGCGGGTCTTCAACAACACCGCCC 395697
Query 111964 GCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGC 112017
| || || |||| | ||| ||||| | || | |||| |||| |||||||
Sbjct 395696 GATACGTCGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTCGCTATCTACCTTGAGC 395640
Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077
|||||||||| ||| || | ||||| ||||| |||| || || ||| | ||||||
Sbjct 395639 CATGGCACGCCGATGTCTTCGAGTTTCTTGACCTGCGCAAGAATCACGGTAAGGAGGAGA 395580
Query 112078 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 112137
|| ||| ||||| ||| || ||||||||||| ||||| ||||||||| | || |
Sbjct 395579 TCCGAGCCCGTGATCTTTTCCTTGCCCTCTGGATTCCCGATCTTTTCATGAAGCGGGTCG 395520
Query 112138 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCG 112197
|| ||| || | ||| | || | || || || || || || ||| |||| |
Sbjct 395519 AGAAGAACGGTGACTGGACCCTGATGTGCCCTAACGAGTGTCCTGGCCTCGCCGACTGCT 395460
Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC-- 112255
|||||||||||||| || |||||| |||||||| | || |||| | | | ||
Sbjct 395459 ACGGTGAGGAGTTTGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGTCGTG-GTC-GCAA 395402
Query 112256 GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314
||| || || | || | | ||| | || |||||| || | || || |||||||| |
Sbjct 395401 GACCATG-AAGGCCCAGAAGCTATGGTATGCCATTCTCGAGGCCCAGACTGAGACTGGCA 395343
Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 112374
|| | ||||| ||||| ||| | |||| ||||| || || ||||| |||||
Sbjct 395342 ACCCCTTCATGCTGTACAAGGACCACGCCAACCGGAAGAGCAACCAGAAGAACCTGGGTA 395283
Query 112375 TGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 112434
||| || ||||| || || || || ||| | || | | | | ||||||| |
Sbjct 395282 CCATCCGAAGCTCCAATCTTTGCACTGAGATCATTGAGTACTCTGCCCCAGATGAGGTCG 395223
Query 112435 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC-- 112492
| ||||| ||| | || || || ||||| ||| ||||| || | ||||| ||
Sbjct 395222 CGGTGTGCAACTTGGCCTCCATTGCTCTGCCCGCATATGTTGA--CTACGACAACAACTG 395165
Query 112493 ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGT 112552
| | | | | | ||||| ||||| | ||| ||| | |||| |
Sbjct 395164 CTACAACTTCCAGCAGTTGCACGAGGTTACCCAGGTCGTCGTCCGCAACTTGAACAAGAT 395105
Query 112553 TATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 112612
|||||| || ||||| || || || || || ||| | ||||| ||
Sbjct 395104 CATTGATGTCAACCACTACCCGGTCAAGGAGGCCTACAACAGCAACATGCGGCACCGACC 395045
Query 112613 AATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCA----- 112667
|||||| ||||||| || ||||| || || | |||| ||| | | ||||
Sbjct 395044 TATTGGTGTCGGTGTTCAGGGTCTTGCCGACGCATTC-----TTGGCACTGCGCATACCT 394990
Query 112668 TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCC 112727
|| || ||| || || || | || || || || ||||| || || |||||
Sbjct 394989 TTCGACTCCCCAGAGGCCCGTGAGCTGAACAAGCAGATCTTCGAGACCATCTACCACGCT 394930
Query 112728 GCTCT---TGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 112784
|| || || | ||| || | || |||| || || || || | || | |||
Sbjct 394929 GCCCTCACTGCATCAAGT---GACATTGCCAAGGTGGAGGGCCCCTACAAGACATACGAG 394873
Query 112785 GGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTT 112844
|| || | || ||||| | || || || || |||||| | | || ||
Sbjct 394872 GGCAGCCCCGTCTCGCAAGGCATCCTGCAGTTCGACATGTGGAATGTCAAGCCCTCCGAC 394813
Query 112845 CACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 112904
| || |||||||| || || ||||| |||||||||| ||| |||| ||||| |
Sbjct 394812 CTCTGGGACTGGGATGCACTGAAGGAGAAGATCAAGGAGACTGGTGTTCGCAACAGCTTG 394753
Query 112905 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 112964
||| ||||||||||||| || || || || | |||||| |||| || ||||| ||||||
Sbjct 394752 TTGCTGGCACCAATGCCCACTGCTTCGACGTCGCAAATCCTGGGCAACAATGAGTGCTTT 394693
Query 112965 GAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTC 113024
|| || ||||| | |||||||| | | || | ||||| || ||||| | | |||
Sbjct 394692 GAGCCATACACCTCCAACATCTACCAGCGACGTGTGCTCGCTGGCGAGTTCCAGGTCGTC 394633
Query 113025 AAC---AAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 113081
||| || ||| |||| || | |||| | || | ||||| ||| ||||||
Sbjct 394632 AACCCTTGGCTCCTCAGGGAT---CTGACAGAGCTCGGCTTGTGGTCTGAGGCCATGAAG 394576
Query 113082 GATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATT 113141
| | || | | || |||||||||||| || ||| || || | ||| ||
Sbjct 394575 AACCGTATCATCGCCGAGGATGGTTCCATTCAGAACATTCCTAGCATCCCGGCTGATATC 394516
Query 113142 AAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTG---ACATGGCC 113198
||| | ||| || || ||||| ||| | |||| ||||| | |||||
Sbjct 394515 AAGGCCCTCTACAAGACCGTCTGGGAGATCTCTCAG-AGGA--CCATTGTGCAGATGGCT 394459
Query 113199 GCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATG-GAAAGTCC 113257
|| || |||||| ||||||||||||| ||| | | || | |||| | || ||
Sbjct 394458 GCTGACCGTGGTGCCTTCATTGATCAATCTCAGTCTCTAAACATCCACATGAGGGAG-CC 394400
Query 113258 AACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGG 113317
| | ||| |||| || | |||||| | | | |||||| |||||||| || ||
Sbjct 394399 ATCAATGGGCAAGATCACCAGCATGCACTTCGCCGGCTGGAAGCTCGGTCTCAAGACTGG 394340
Query 113318 GATGTATTACCTCCGATCTAAGGCAAAGGCGCGC-CCAATTCAGTTCA 113364
||||| |||||||| | ||||| || ||| || || |||||||
Sbjct 394339 CATGTACTACCTCCGCACCCAGGCAGCTGC-CGCACCCATCCAGTTCA 394293
>seq279
Length=349471
Score = 104 bits (114), Expect = 3e-17
Identities = 107/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 102181 AGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTA 102240
||||||| | || || || || ||||| ||||||||| ||| | ||| | |||
Sbjct 263061 AGCGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGCGCATTCGCCTCTA 263002
Query 102241 TTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCT 102300
||| |||||||||||||| || |||||||| || || ||||||||||||||| || |
Sbjct 263001 TTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCCAACGAGCTCATTT 262942
Query 102301 CTCGTGACGAGGGACTCCAC 102320
||||||| ||||| || |||
Sbjct 262941 CTCGTGATGAGGGTCTGCAC 262922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620734757109200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |