Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq334 179 4e-40 seq667 86.0 7e-12 >seq334 Length=742376 Score = 179 bits (198), Expect = 4e-40 Identities = 1004/1584 (63%), Gaps = 41/1584 (3%) Strand=Plus/Plus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGG 109566 |||||||| ||||| ||||| |||||| ||||| ||||| | | || | | || Sbjct 394424 GACTGAGATTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCACAATGGTCCTCTGA 394483 Query 109567 CTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGA-TGTT 109625 || |||||||| |||||||| | |||||||||| | || ||| | | || |||| Sbjct 394484 GAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATATCAGCCGGGATG-CTAGGAATGTT 394542 Query 109626 TTGAATAGAGCCACCAGCCTTCACCATGAGA---TCCTTCATCTCTTTCGACCAGAGACC 109682 ||||| || |||| ||| | |||| | | |||||| | | ||||| | || Sbjct 394543 CTGAATGGA---ACCATCCTCGGCGATGATACGGTTCTTCATGGCCTCAGACCACAAGCC 394599 Query 109683 GACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGT 109742 || || | | ||||| | || |||||| || || || ||||| || Sbjct 394600 GAGCTCTGTCAGATCCCTGAGGAGCCAAGGGTTGACGACCTGGAACTCGCCAGCGAGCAC 394659 Query 109743 GCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTG 109802 ||||| |||||||||| | ||||| || || || |||||||||||||| |||||||| Sbjct 394660 ACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCACTCATTGTTGCCCAGGATTTG 394719 Query 109803 TGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTT 109862 | || ||||| |||||||| || |||| | | ||||| || | ||| || ||| Sbjct 394720 CGACGTCGAAGCAGTGGGCATTGGTGCCAGCAACAAGCTGTTGCGAACACCAGTCTCCTT 394779 Query 109863 TACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCA 109922 | | ||| || ||| ||||| || | || | | | || ||| ||| Sbjct 394780 GATCTTCTCCTTCAGTGCATCCCAGTCCCA--GAGGTCGGA----GGGCTTGACATTCCA 394833 Query 109923 CATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCC 109982 ||| || || || | || | | | || |||| | | ||| ||| | || Sbjct 394834 CATGTCGAACTGCAGGATGCCTTGCGAGACGGGGCTGCCCTCGTATGTCTTGTAGGGGCC 394893 Query 109983 CTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAAT 110042 ||| |||| ||| | || ||| || || || || || || || ||||| || || Sbjct 394894 CTCCACCTTGGCAATGTCACTTGATGCAGTGAGGGCAGCGTGGTAGATGGTCTCGAAGAT 394953 Query 110043 ATGAGCATTCATGAGGCGAGACTCTTCACAGTCG-AAGGGAAGACCA---CAAAGAATAA 110098 || |||| || | |||| ||||| |||| | | || | |||||| Sbjct 394954 CTGCTTGTTCAGCTCACGGGCCTCTGGGGAGTCGAAAGGTATGCGCAGTGCCAAGAAT-- 395011 Query 110099 ACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAG-CGT 110157 | || || |||||||||||||||| |||||| || || ||| |||||| | || Sbjct 395012 --GCGTCGGCAAGACCCTGAACACCGACACCAATAGGTCGGTGCCGCATGTTGCTGTTGT 395069 Query 110158 CGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACA 110217 | || | || ||||| |||| || |||| | || | || || Sbjct 395070 AG-GCCTCCTTGACCGGGTAGTGGTTGACATCAATGATCTTGTTCAAGTTGCGGACGACG 395128 Query 110218 GTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATAT 110277 || || | || || | | | | | | | | || | || | | |||||| Sbjct 395129 ACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCAGTTGTTGTCGTAGTCAACATAT 395188 Query 110278 TTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCC 110337 ||| |||||||| || || | |||||||| | ||| ||| | | | ||| || Sbjct 395189 GCGGGCAGAGCAATGGAGGCCAAGTTGCACACCGCGACCTCATCTGGGGCAGAGTACTCA 395248 Query 110338 AAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATT-CGATTT 110396 | || || || || | ||||| || ||| ||||| ||||||||| || | || Sbjct 395249 ATGATCTCAGTGCAAAGATTGGAGCTTCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTC 395308 Query 110397 GGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAG 110456 | | || || ||||| || |||||| | ||| | ||||| || ||||| | || ||| Sbjct 395309 CGGTTGGCGTG-GTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCTGGGCCTCGAG 395367 Query 110457 AATGGCCTTCCATA-CATCGGCGGCGGGGACAG--TTGCGTTAGCGAGACCTTCCTCCTC 110513 |||||| | ||||| | || | ||| | | ||||| | | |||| |||| ||| Sbjct 395368 AATGGCATACCATAGCTTCTG-GGCCTTCATGGTCTTGCG--ACCACGACCCTCCTTCTC 395424 Query 110514 GTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTT 110573 ||||| ||| | ||||||| |||| ||||| || | || || || Sbjct 395425 GTACTGCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGACACTC 395484 Query 110574 GTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGG 110633 || || || | |||| ||| | || || ||| |||| ||||||||| || || || Sbjct 395485 GTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAGATCGGG 395544 Query 110634 AATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCG 110693 |||||| | || |||||| |||||| || ||| || | ||| || || ||| Sbjct 395545 AATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTACCGTGATTCTTGCG 395604 Query 110694 TAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCC 110753 || || | ||| || | || ||| | ||||||||| || || |||| ||||| || || Sbjct 395605 CAGGTCAAGAAACTCGAAGACATCGGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACC 395664 Query 110754 CTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCAT 110810 ||| || |||||| || || || || ||| |||||||||| ||||| Sbjct 395665 GGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGTTGAAGACCCGCAGCAT 395724 Query 110811 AGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAAT 110870 || | || |||| || ||| || || || || || ||||||| || Sbjct 395725 TGGGGTGATGCCATTAGAGGTACCGTTGGTGCCAGCGATGTATGAGCCGGTGGCACGGAT 395784 Query 110871 GTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACTCTGTGA 110929 | ||| | | || |||||| ||||||||| ||| || |||| | ||| | | Sbjct 395785 GCGGTGCACGTTCAGACCAATTCCACCCGCCATCTTGGAGATCATAGCACAAGTCT-TTA 395843 Query 110930 GTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACA 110989 | || ||||||| || ||||| || |||| || | | || ||||| || |||| Sbjct 395844 GGGTGTCATAAATGCCCTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCATGATGACA 395903 Query 110990 TCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTT 111049 ||| || | || || || |||||||| | ||| || | ||||| ||| ||| ||| Sbjct 395904 GCTGGGGCTGGGGAGTGCCAGCATTGAACAATGTGGGGGAGGCATGTGTGA--AGAACTT 395961 Query 111050 G--GGACATCTTGTTGTATGTGTC 111071 | |||||| ||||||||| || Sbjct 395962 GTTTGACATCAGGTTGTATGTCTC 395985 >seq667 Length=656741 Score = 86.0 bits (94), Expect = 7e-12 Identities = 218/325 (67%), Gaps = 10/325 (3%) Strand=Plus/Plus Query 11677 CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCG 11736 |||| ||||||||||| |||||||| || || || || ||| || || || || Sbjct 374455 CCGATGGCGTCAATCTCGTCGATGAAAACAATGCAAGGGGCGTTCTTGCGCGCTTGCGCG 374514 Query 11737 AAAAGTTCACGTACACGCTT--CGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGG 11794 || | || || ||| ||| || || ||||| || |||||||| ||||| | | Sbjct 374515 AACAAGTCCCG--CACTCTTGAGGCACCGACACCGACAAACATCTCCACGAACTCAGATC 374572 Query 11795 CA-GAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTC 11853 || |||||||| ||| || || || ||||| || | || ||||| || ||| Sbjct 374573 CACTGACACTGAA-GAAAGGCACTCCCGATTCACCGGCAGTAGCCTTTGCGAGCAGTGTC 374631 Query 11854 TTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTC 11911 ||||| || || |||| ||||| | | ||| || || || ||||| || || || || Sbjct 374632 TTACCGGTTCCGGGTGGACCAGACAAGATGGCACCGCGAGGAATCTTTGCGCCCAACCTC 374691 Query 11912 CAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGG 11971 | | ||||| |||||||| ||||| || | |||| | ||| |||| || Sbjct 374692 --TGGAATCGCTCTGGCTTCTTCAGGAAAGAGACGAACTCCATGATTTCGACCTTTGCTT 374749 Query 11972 AGTCGATACCCTCAACATCGGTGAA 11996 ||| ||||| ||| ||||| ||| Sbjct 374750 CGTCCATACCGGCAATATCGGCGAA 374774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588968748233000