Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq334 219 5e-52 seq279 118 1e-21 >seq334 Length=742376 Score = 219 bits (242), Expect = 5e-52 Identities = 1129/1772 (64%), Gaps = 49/1772 (3%) Strand=Plus/Plus Query 105558 TGAACTGAATTGG-GCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGT 105616 ||||||| || || ||| || ||||| | ||||| |||||||| || |||||||| Sbjct 394293 TGAACTGGATGGGTGCG-GCAGCTGCCTGGGTGCGGAGGTAGTACATGCCAGTCTTGAGA 394351 Query 105617 CCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CAT 105675 || | ||||| || | ||||| | || |||| ||| | ||| || | ||| Sbjct 394352 CCGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATTGATGG-CTCCCTCAT 394410 Query 105676 GAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATAT---C 105732 | | || | | ||| || ||||||||| |||||| | || ||||| | | Sbjct 394411 GTGGATGTTTAGAGACTGAGATTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCAC 394470 Query 105733 AATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGG 105792 |||| |||| | ||| ||||| || || |||||| |||||||||| | || Sbjct 394471 AATGG--TCCT-CTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATATCAGCCGG 394527 Query 105793 GATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCCTT 105852 ||| | || || ||||| ||||| || | || || | | |||||| ||| Sbjct 394528 GATGCTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGATACGGTTCTTCATGGCCTC 394587 Query 105853 GGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTC 105912 ||||| | || | || | ||||| ||| ||| |||||| | | ||||| Sbjct 394588 AGACCACAAGCCGAGCTCTGTCAGATCCCTGAGGAGCCAAGGGTTGACGACCTGGAACTC 394647 Query 105913 TCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATT 105972 || ||||| | || | | |||||||| | ||||| || |||||||| ||||| || Sbjct 394648 GCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCACTCATTGTT 394707 Query 105973 ACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAG 106032 |||| |||||| | || || || || ||||||||||||| ||| | ||||| |||| Sbjct 394708 GCCCAGGATTTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGCAACAAGCTGTTGCGAAC 394767 Query 106033 ACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCAC 106091 ||| | |||||||| ||||| || |||||||||| || | | || || || Sbjct 394768 ACCAGTCTCCTTGATCTTCTCCTTCAGTGCATCCCAGTCCCAGAGGTCGGAGGGCTTGAC 394827 Query 106092 CTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCAT 106151 |||| |||| || || || || | ||||| || ||| ||||| |||||| | Sbjct 394828 ATTCC-ACATGTCGAACTGCAGGATGCCTTGCGAGACGGGGCTGCCCTCGTATGTCTTGT 394886 Query 106152 AGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTT 106211 ||| || | | | || | |||| || |||| ||||| || ||||| | Sbjct 394887 AGGGGCCCTCCACCTTGGCAATGTCACTTGATGCAGTGAGGGCAGCGTGGTAGATGGTCT 394946 Query 106212 CAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA---CA 106268 | ||||| | |||| ||| ||| || || || || | ||| ||| | Sbjct 394947 CGAAGATCTGCTTGTTCAGCTCACGGGCCTCTGGGGAGTCGAAAG-GTATGCGCAGTGCC 395005 Query 106269 AAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAG 106328 || ||| | || || ||||| |||||||| | ||||||||||| ||| ||||| || Sbjct 395006 AAG--AATGCGTCGGCAAGACCCTGAACACCGACACCAATAGGTCGGTGCCGCATGTTGC 395063 Query 106329 ACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGG 106388 || || || || || || || ||||||| ||| | || | Sbjct 395064 TGTTGTAGGCCTCCTTGACCGGGTAGTGGTTGACATCAATGATCTTGTTCAAGTTGCGGA 395123 Query 106389 TAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAA--AGTGCGAGTC-TCTTCAT 106445 || | || || | || || | | | | | | ||| ||| | ||| Sbjct 395124 CGACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCAGTTGTTGTCGTAGTCA- 395182 Query 106446 TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTG 106505 ||||| || || || || || ||||| ||||| || || |||||| | | Sbjct 395183 --ACATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACACCGCGACCTCATCTGGGGCAG 395240 Query 106506 TGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGT 106565 |||||| | || || || || | ||||| || || || |||| ||||| |||| Sbjct 395241 AGTACTCAATGATCTCAGTGCAAAGATTGGAGCTTCGGATGGTACCCAGGTTCTTCTGGT 395300 Query 106566 TACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTG 106625 | ||||| |||| |||||||| |||||| |||| | || ||||| ||||| | Sbjct 395301 TGCTCTTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCTGGG 395360 Query 106626 ACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGG---CCCGTCCC 106681 || |||||| || | ||| | | || | | || |||| ||| | || ||| Sbjct 395361 CCTCGAGAATGGCATACCATAGCTTCTGGGCCTTC----ATGGTCTTGCGACCACGACCC 395416 Query 106682 TCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCT 106741 ||| |||||||| |||||| || |||||||||||||| ||||| ||| || Sbjct 395417 TCCTTCTCGTACTGCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCGAGGCCA 395476 Query 106742 GGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAA 106801 || || || || || | || | ||| | ||| || ||| ||||||||||||||| Sbjct 395477 GGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAA 395536 Query 106802 AGGTCTGGAATCCACAGGG-ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTG 106860 || || |||||||| |||| | | ||| ||||| | || ||| || | ||| || Sbjct 395537 AGATCGGGAATCCAGAGGGCAAGGAAA-AGATCACGGGCTCGGATCTCCTCCTTACCGTG 395595 Query 106861 GTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGC 106920 || || | ||||| ||||| | || ||| ||||||||||||||||| |||| || Sbjct 395596 ATTCTTGCGCAGGTCAAGAAACTCGAAGACATCGGCGTGCCATGGCTCAAGGTAGATAGC 395655 Query 106921 GATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAA 106974 || | || ||||| ||| | || | || || || || ||| ||| || Sbjct 395656 GAAGGCACC---GGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGTTGAA 395712 Query 106975 TACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGAT 107032 || || |||||||| | || |||| || ||| || || || ||| || ||| Sbjct 395713 GACCCGCAGCATTGGGGTGATGCCATTAGAGGTACCGTTGGTGCCAGCGATGTATGAG-- 395770 Query 107033 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGC 107092 |||| | | || | || || ||||| || || ||| ||| ||||| Sbjct 395771 CCGGTGGCACGGATGCGGTGCACGTTCAGACCAATTCCACCCGCCATCTTGGAGATCATA 395830 Query 107093 GCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGG 107152 ||||| | | || || |||| || || | || ||||||||| || ||| ||| Sbjct 395831 GCACAAGTCTTTAGGGTGTCATAAATGCCCTCAATGCTGTCCTCCTTCATGTCGACGAGG 395890 Query 107153 AAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGA 107212 ||||| |||| ||| || || || ||||||||||| | || || | || || Sbjct 395891 AAGCATGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAACAATGTGGGGGAGGCATGT 395950 Query 107213 ATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 107271 |||| | || | | |||||| || ||||||||| | ||| || | || || || Sbjct 395951 GTGAAGA-ACTTGTTTGACATCAGGTTGTATGTCTCAATGACCCTTTCGACATCGTCTCC 396009 Query 107272 GTGGATGCCGATGGCCACACGCATAAACATGT 107303 ||| |||| || |||||||| | ||||| Sbjct 396010 CCAGATACCGACAGCGACACGCATGATCATGT 396041 >seq279 Length=349471 Score = 118 bits (130), Expect = 1e-21 Identities = 299/453 (66%), Gaps = 10/453 (2%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| || || ||||||||||||||||||||||| ||| | || ||||| ||||| Sbjct 262623 TAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGAGAGATGTTCTCCATG 262682 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100 ||||| || || ||| || || ||| | | || |||| | |||| Sbjct 262683 AAGTCGAAGGGGTTCGACGACTTGTAAACCTTCTCGTTG----CCCAGAGCGACC-AGGA 262737 Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160 |||| || | ||| |||| ||||||| ||| | |||||||| |||| ||| Sbjct 262738 GACGGTCGGCAACAAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGGAGGG 262797 Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220 ||||| || || || | |||| | |||||||| | || ||||| | | |||| Sbjct 262798 CGCATGGCAGAGCCTCGGTCAAGAACTCCTTCTCAATGGCGACAGCCTCGGTGATGATGT 262857 Query 117221 CGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACT 117280 | |||| | | | | || | || | || ||| || ||| || | Sbjct 262858 CCTGGACACGCTGCTTGCTTGGACGGTTCCTCAGGTGAGAGAACAGGAGACAGGCGAAGT 262917 Query 117281 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGA 117340 | ||| ||||||||||| || ||||| || || || |||||| ||||| ||||||| Sbjct 262918 CGGTGTGCAGACCCTCATCACGAGAAATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATGA 262977 Query 117341 GACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCA 117400 | || |||||||| | ||| |||||| | ||||| || ||||||||| ||||| | Sbjct 262978 GGCCACGCTTCTTGAGCCAGAAAATAGAGGCGAATGCGCCACTGAAGAAGATGCCCTCGA 263037 Query 117401 CACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 | || || |||| || |||| |||| ||| Sbjct 263038 CGGCAGCGAAGGCAACCAGTCGCTGGGCGTAGG 263070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589973535861400