Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 8e-16
seq512 86.0 5e-12
>seq1
Length=1124325
Score = 98.7 bits (108), Expect = 8e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| || || || || || ||||| |||| || || | | | || || | |||
Sbjct 67670 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGC 67611
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || || || |||| |||||| || || || ||||||||||| || || || || ||
Sbjct 67610 TTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTG 67551
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | ||||| || | ||||| ||||| |||| || ||||| ||
Sbjct 67550 GACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTG 67491
Query 101447 AAAGTTTTTACAAATATCTGCATG 101470
| || || || || |||||||||
Sbjct 67490 AGGGTCTTCACGAAGATCTGCATG 67467
>seq512
Length=287951
Score = 86.0 bits (94), Expect = 5e-12
Identities = 143/207 (69%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| |||||||| || ||||| || ||||| |||| || || | | | || || | ||
Sbjct 18434 ATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTG 18493
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || ||||| || | ||||| || || || || ||||| || || || || || ||
Sbjct 18494 CTTGCCGGCAAAGATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTT 18553
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| || | || | || || || | || || ||||| |||| || ||||| ||
Sbjct 18554 GGACTTGACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCTGT 18613
Query 101446 TAAAGTTTTTACAAATATCTGCATGGT 101472
| || || || || |||||||||||
Sbjct 18614 GAGGGTCTTCACGAAGATCTGCATGGT 18640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396273642801645
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |