Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq512 95.1 9e-15 >seq512 Length=287951 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 48537 TCGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCA 48596 ||||| || | || || | ||||| || ||||| || || || || ||||| ||| Sbjct 17952 TCGCCACCACGGAGACGAAGCACCAGGTGCAGCGTCGATTCCTTCTGGATGTTGTAGTCA 18011 Query 48597 GATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTG 48656 ||||| | || | || ||||||||||| || || || || || || || || || | Sbjct 18012 GATAGCGTCCGGCCATCTTCCAACTGCTTGCCAGCGAAAATGAGACGTTGCTGGTCTGGT 18071 Query 48657 GGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCC 48716 |||| ||||||||||| |||||| || || | | | || || | ||| Sbjct 18072 GGAATTCCCTCCTTGTCCTGAATCTTAGACTTGACGTTGTCAATCGTGTCCGATGACTCG 18131 Query 48717 ACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| | ||| ||||| || |||||||| || || || ||||||||||| Sbjct 18132 ACCTCAAGCGTGATCGTCTTGCCCGTCAAGGTCTTGACGAAAATCTGCAT 18181 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || || || ||||| || || || |||| | || || | |||||| || ||||| Sbjct 18219 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGCCCATCCTCGAGCTGCTTTCCAGCAAAG 18278 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 ||||| ||||| || || | ||| | |||||||||||| ||||| || ||| Sbjct 18279 ATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 18338 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | ||||| | ||| ||||| | ||||| || || || |||| ||| || || Sbjct 18339 TCGATGGTGTCTGAGGACTCGACCTCGAGGGTAATGGTCTTGCCAGTCAGAGTCTTGACG 18398 Query 48756 AAAATCTGCAT 48766 || |||||||| Sbjct 18399 AAGATCTGCAT 18409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380933026963155