Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq334 349 6e-91 seq279 158 2e-33 >seq334 Length=742376 Score = 349 bits (386), Expect = 6e-91 Identities = 1210/1868 (65%), Gaps = 60/1868 (3%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | || | ||||| |||| |||||| || ||||||||||| ||||| Sbjct 394289 ACAGTGAACTGGATGGGTGCGGCAGCTGCCTGGGTGCGGAGGTAGTACATGCCAGTCTTG 394348 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668 || || ||| ||||||| | |||||| |||| ||| || || || || Sbjct 394349 AGACCGAGCTT---CCAGCCGGCGAAGTGCAT-GCTGGTGATCTTGCCCA--TTGATG-- 394400 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 | || |||| || || | ||| || |||||| || || ||||| | | Sbjct 394401 --GCTC--CCTCATG-------TGGATGTTTAGAGACTGAGATTGATCAATGAAGGCACC 394449 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | |||||| ||||| | | || ||||| |||| |||||| ||||||||| ||| Sbjct 394450 ACGGTCAGCAGCCATCTGCACAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAG 394509 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCC--CCTGTGT-ATGGT 212845 | |||| || | |||| || || |||||||| | || || ||| | ||| | Sbjct 394510 GGCCTTGATATCAGCCGGGATGCTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGAT 394569 Query 212846 CAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTC-CAGGCACTTGACCAGGT 212904 | | | |||| |||| ||| | ||| | ||| ||| | ||| || Sbjct 394570 ACGGTTCTT---CATGGCCTCAGACCACAAGCCGA-GCTCTGTCAGATCCCTGAGGAGCC 394625 Query 212905 GAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGT 212964 ||||||||| | |||||| || || | |||||| | | |||||| | ||| || |||| Sbjct 394626 AAGGGTTGACGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGT 394685 Query 212965 AGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAG 213024 | ||||| | || ||| ||||| ||||| || || | || || |||||||| || | Sbjct 394686 ATGGCTCAAAGCACTCATTGTTGCCCAGGATTTGCGACGTCGAAGCAGTGGGCATTGGTG 394745 Query 213025 CCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGT 213084 ||| || | ||||| | || || ||| ||| | || | |||||| Sbjct 394746 CCAGCAACAAGCTGTTGCGAACACCAGTCTCCTTGATCTTCTCCTTCAGTGCATCCCAGT 394805 Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 |||| ||||| | ||| || ||||||||||| ||||||| |||||||| Sbjct 394806 CCCAG---------AGGTCGGAGGGCTTGACATTCCACATGTCGAACTGCAGGATGCCTT 394856 Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 ||||||||||||| ||| | ||||||||| | | ||||||| | || | | Sbjct 394857 GCGAGACGGGGCTGCCCTCGTATGTCTTGTAGGGGCCCTCCACCTTGGCAATGTCACTTG 394916 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 | || |||||||||| ||||||||| || || |||| | |||| |||| ||||| Sbjct 394917 ATGCAGTGAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGGGCCT 394976 Query 213265 CTGGGGACGTGAAGGGCATCATCA-TGCGTTGGAACACATCAGCCAGCCCCTGGACCCCG 213323 ||||||| ||| || || || ||| | || | || || || ||||| || ||| Sbjct 394977 CTGGGGAGTCGAAAGGTATGCGCAGTGCCAAG-AATGCGTCGGCAAGACCCTGAACACCG 395035 Query 213324 ATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTG 213383 | || || |||| ||| | || ||| ||| || ||||| | ||||| |||| Sbjct 395036 ACACCAATAGGTCGGTGCCGCATGTTGCTGTTGTAGGCCTCCTTGACCGGGTAGTGGTTG 395095 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 || ||||||||||| | ||||||| | | || | ||| || | | || | || | Sbjct 395096 ACATCAATGATCTTGTTCAAGTTGCGGACGACGACCTGGGTAACCTCGTGCAACTGCTGG 395155 Query 213444 TGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTG 213503 ||| | || | ||| | ||| | | ||||| || ||| ||||| |||| Sbjct 395156 AAGTTGTAGCAGTTGTTGTCGTAGTCAACATATGCGGGCAGAGCAATGGAGGCCAAGTTG 395215 Query 213504 CAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCAT 213563 || || || ||||| | | | | | |||||| |||||||| ||||| || ||| || | Sbjct 395216 CACACCGCGACCTCATCTGGGGCAGAGTACTCAATGATCTCAGTGCAAAGATTGGAGCTT 395275 Query 213564 CGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATG 213623 |||||||| |||||||||| ||||| ||| |||||| |||||||| |||||| Sbjct 395276 CGGATGGTACCCAGGTTCTTCTGGTTGCTCTTCCGGTTGGCGTGGTCCTTGTACAGCATG 395335 Query 213624 TAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGTACCTGGCCT 213681 ||||| || ||||| ||||| | | || || ||| ||| || | | ||||| Sbjct 395336 AAGGGGTTGCCAGTCTCAGTCTGGGCCTCGAGAAT--GGCATACCATAGCTTCTGGGCCT 395393 Query 213682 TGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATT 213741 | | | | || || | | ||||||||| |||||||| | | || | Sbjct 395394 TCATGGTCTTGCGACCACGACCCTCCTT---CTCGTACTGCTCGTAGAGAGCCTCAAACT 395450 Query 213742 CGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCC 213801 | | || || | | || || ||||| || ||||| ||| ||||||| | Sbjct 395451 CCTCACCGTAGCAGTCGGCGAGGCCAGGACACTCGTTAGGGCACATCAGGGTCCAGTCAC 395510 Query 213802 CGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCC 213860 ||| | |||| ||| | || |||||| || || || | ||| || || ||| || || Sbjct 395511 CGTTCTTCTC-GACCCGCTTCATGAAAAGATCGGGAATCCAGAGGGCAAGGAAAAGATCA 395569 Query 213861 CTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCC 213920 | || | |||| ||| || || |||||||| || ||||| || |||| || Sbjct 395570 CGGGCTCGGATCTCCTCCTTACCGTGATTCTTGCGCAGGTCAAGAAACTCGAAGACATCG 395629 Query 213921 GCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCC 213977 |||||||| ||||| | |||||| || ||||| || || | |||| || |||||||| Sbjct 395630 GCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTGTTGCCACCCTGGTCG 395689 Query 213978 ACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCG 214037 || | ||| ||||||||| ||||| | || | || || || ||| Sbjct 395690 ACGTATCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGGGTGATGCCATTAGAGGTACCG 395749 Query 214038 TTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCA 214097 ||||| || || || || ||||||| ||| | | | | || | || || || ||| Sbjct 395750 TTGGTGCCAGCGATGTATGAGCCGGTGGCACGGATGCGGTGCACGTTCAGACCAATTCCA 395809 Query 214098 CCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTG 214157 || || |||||||||||| || || | | | || || ||||| | |||||| Sbjct 395810 CCCGCCATCTTGGAGATCATAGCACAAGTCTTTAGGGTGTCATAAATGCCCTCAATGCTG 395869 Query 214158 TCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTG 214217 || || | | || | | |||||| || ||||||||| || | ||||| ||| Sbjct 395870 TCCTCCTTCATGTCGACGAGGAAGCATGATGACAGCTGGGGCTGGGGAGTGCCAGCATTG 395929 Query 214218 AAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGG 214277 || | |||||| |||||| | | |||||||| || | || |||| ||||| | | Sbjct 395930 AACAATGTGGGGGAGGCATGTGTGAAGAACTTGTTTGACATCAGGTTGTATGTCTCAATG 395989 Query 214278 ACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGC 214337 || || |||| ||| | |||| | ||| | ||||||||| ||| Sbjct 395990 ACCCTTTCGACATCGTCTCCCCAGATACCGACAGCGACACGCATGATCATGTGCTGTGGC 396049 Query 214338 CTCTCTATGGGT---CCTTTGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAAC 214394 | ||| | | || | | | |||||| ||||| || |||||||| |||||||| Sbjct 396050 CGCTCGACAACTTTACCATCGAG---CTTGAGGAGGTATGAACGCTCCAGGGTCTTGAAG 396106 Query 214395 CCAAAGTA 214402 || || || Sbjct 396107 CCGAAATA 396114 >seq279 Length=349471 Score = 158 bits (174), Expect = 2e-33 Identities = 300/439 (68%), Gaps = 11/439 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | |||||||||||||| ||||| || | | ||||||||||| Sbjct 262619 CTGGTAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGAGAGATGTTCTC 262678 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||||||||| | | || || ||| | || ||||| |||| | Sbjct 262679 CATGAAGTCGAAGGGGTTCGACGACTTGTAAACCT-TCTCGTTGCCCAGAGCGACCAGGA 262737 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | || || || |||||||||| | ||||||| || ||||||||| | ||||| Sbjct 262738 GACGGTCGGCAACAAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGGAGGG 262797 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 |||| ||||| || | ||||||||||| || || || || | || | Sbjct 262798 CGCATGGCAGAGCCTCGGTCAAGAACTCCTTCTCAATGGCGACAGCCTCGGTGATGATGT 262857 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATG---CAGG 48134 || || || || || ||| | |||||| | ||| || | |||| Sbjct 262858 CCTGGACACGCTGCTTGCTTGGACGGTTCCTCAGGTG------AGAGAACAGGAGACAGG 262911 Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 | ||||| |||||| || || || || |||||| ||||||||||| || |||| Sbjct 262912 CGAAGTCGGTGTGCAGACCCTCATCACGAGAAATGAGCTCGTTGGAGAAGGTCAGGCCAG 262971 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 |||||| || | || |||||||||||||| | ||||| | |||| ||||||||||| Sbjct 262972 GCATGAGGCCACGCTTCTTGAGCCAGAAAATAGAGGCGAATGCGCCACTGAAGAAGATGC 263031 Query 48255 CCTCCACTGCCGCGAACGC 48273 |||| || || ||||| || Sbjct 263032 CCTCGACGGCAGCGAAGGC 263050 Score = 102 bits (112), Expect = 2e-16 Identities = 165/237 (70%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 |||| |||||||||| | ||||| || ||||||||| ||||||||| | ||||| Sbjct 263259 GTACGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGCGCCTC 263318 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 | ||| || || | ||| | ||||| ||| ||||| ||||| || |||||||| Sbjct 263319 TGGGATCTGAACCTCGCCGCTGAAGCGCTCCACCAGGTTCTCGTTGACGATTCCATCTGA 263378 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCAT- 48602 |||||| |||||||| |||| || | ||| | || |||| || ||| || | Sbjct 263379 AGCAGCGAAGAAGGCGAGGATGTGGGAGACGAAGTATCGTTCGTCGTCGGTCAGGCGGTT 263438 Query 48603 --TCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657 ||||| | || | ||| ||| || || | || || ||||||||||||| || Sbjct 263439 GCTCCAGTCGTGCAGGTCCTTGGAGAGATCGATCTCCTCGGCAGTCCAGAAGGAAGC 263495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931521330502400