Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq334 255 1e-62 seq279 154 3e-32 >seq334 Length=742376 Score = 255 bits (282), Expect = 1e-62 Identities = 880/1343 (66%), Gaps = 51/1343 (4%) Strand=Plus/Plus Query 221354 GACACCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGAC 221413 || || || || || ||||| | || |||||| || | || | ||| | | | || Sbjct 394859 GAGACGGGGCTGCCCTCGTATGTCTTGTAGGGGCCCTCCACCTTGGCAATGTCACTTGA- 394917 Query 221414 TGC-GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGG-CCT 221471 ||| || ||||||||||||||||||||||| |||||| |||||| || ||| || ||| Sbjct 394918 TGCAGTGAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAG-CTCACGGGCCT 394976 Query 221472 CGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGA 221531 | || || ||| || || ||||| | || ||||||| || ||||| || |||| Sbjct 394977 CTGGGGAGTCGAAAGGTATGCGCAGTGCCAAGAATGCGTCGGCAAGACCCTGAACACCGA 395036 Query 221532 TACCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTT 221589 ||| || || | ||| | | ||||| | | | | || || | |||| || ||| Sbjct 395037 CACCAATAGGTCGGTGCCGCATGTTGCTGTTGTAGGC-CTCCTTGACCGGG-TAGTGGTT 395094 Query 221590 GACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTG 221649 ||| || || | ||||| | ||| | || ||| | |||||| || || ||| Sbjct 395095 GACATCAATGATCTTGTTCAAGTTGCGGACGACGACCTGGGTAACCTCGTGCAACTGCTG 395154 Query 221650 GTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAAC 221709 | ||| | || | | ||||| | || ||| | ||| || |||| Sbjct 395155 GAAGTTGTAG--CAGTT----GTTGTCGTAG------TCAACATATGCGGGCAGAGCAAT 395202 Query 221710 GCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACA 221769 | ||||| ||| ||||| || ||||| || | | |||| |||||||| || || Sbjct 395203 GGAGGCCAAGTTGCACACCGCGACCTCATCTGGGGCAGAGTACTCAATGATCTCAGTGCA 395262 Query 221770 GAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTC 221829 || ||| || |||||| ||||||| || || || ||| || ||||| ||| Sbjct 395263 AAGATTGGAGCTTCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTCCGGTTGGCGTGGTC 395322 Query 221830 CTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAG 221889 |||||| ||||| ||||| ||||||||| ||| ||| | ||||| | ||| || Sbjct 395323 CTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCTGGGCCTCGAGAATGGCATACCATAG 395382 Query 221890 TTCTCTGGCGCT-CACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATAC--CCGGTAT 221945 | ||||| || || ||| | ||| | |||||| ||| || ||| | ||| Sbjct 395383 CT-TCTGGGCCTTCATGGTCTTGC-GACCACGACCCTC---CTTCTCGTACTGCTCGTAG 395437 Query 221946 AGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACA 222005 ||||| | |||||| |||||||| ||| | ||||| |||||| | || |||| Sbjct 395438 AGAGCCT--CAAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGACACTCGTTAGGGCACA 395495 Query 222006 TCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCG 222065 |||| |||||| ||| | | ||||| || |||||| || || || ||||| || | Sbjct 395496 TCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAGATCGGGAATCCAGAGGG 395555 Query 222066 CCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAA 222125 | | || ||||| | || || ||||||| |||| || || | ||| || | || Sbjct 395556 CAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTACCGTGATTCTTGCGCAGGTCAAGAA 395615 Query 222126 ACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGT 222185 |||| || | || |||||||| ||||| || |||| || | || ||||| ||||||| Sbjct 395616 ACTCGAAGACATCGGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTGT 395675 Query 222186 TGCCACCCTGATCCAC-CATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAG 222243 |||||||||| || || ||| | | | |||||||| || || | || | Sbjct 395676 TGCCACCCTGGTCGACGTATC--GGGCGGTGTTGTTGAAGACCCGCAGCATTGGGGTGAT 395733 Query 222244 TCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG-G 222302 || || || |||||||||||| ||||| | ||| ||| | || | | | | Sbjct 395734 GCCATTAGAGGTACCGTTGGTGCCAGCGATGTATGAGCCGGTGGCAC---GGATGCGGTG 395790 Query 222303 CA--GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTC 222360 || || || || ||||| || || |||||||| || || |||| || ||||| Sbjct 395791 CACGTTCAGACCAATTCCACCCGCCATCTTGGAGATCATAGCACAAGTCTTTAGGGTGTC 395850 Query 222361 CATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGA 222420 |||||||| || ||||||||| | || | || || || || |||| ||| | Sbjct 395851 ATAAATGCCCTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCATGATGACAGCTGGGG 395910 Query 222421 TTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACAT 222480 | || | | || || |||| ||||| ||| ||||| ||| | | ||||| Sbjct 395911 CTGGGGAGTGCCAGCATTGAACAATGTGGGGGAGGCATGTGTGAAGAACTTGTTTGACAT 395970 Query 222481 CAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATC 222539 ||| | ||| ||||| | ||| || ||| | ||| ||| || | | | ||| | Sbjct 395971 CAGGTTGTATGTCTCAATGACCCTTTCGACATCGTCTCCCCAGATACCG-ACAGCGACAC 396029 Query 222540 TCATGTACATGTACTGGGGCCTCTCCACAGGAC----CCTTGGAGCTGGAGAGCAGGTAC 222595 |||| ||||| ||| |||| ||| ||| || || | ||||| ||| ||||| Sbjct 396030 GCATGATCATGTGCTGTGGCCGCTCGACA--ACTTTACCATCGAGCT--TGAGGAGGTAT 396085 Query 222596 GATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACG 222655 || ||||| |||||||| || || || | | | ||||||| | | ||| ||| | | Sbjct 396086 GAACGCTCCAGGGTCTTGAAGCCGAAATATTGGTAGCCAAAGTCACGGTCGTAAACAATG 396145 Query 222656 GCGGCGTCCAGCTCCGACTTGTG 222678 || | ||| | |||| |||||| Sbjct 396146 GCCGAGTCGAACTCCTCCTTGTG 396168 Score = 86.0 bits (94), Expect = 1e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | |||||| | | |||||| | ||| || ||| | || Sbjct 394630 GTTGACGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGG 394689 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 || | || ||| |||||||||||||| || | ||| || |||||||| ||||||| Sbjct 394690 CTCAAAGCACTCATTGTTGCCCAGGATTTGCGACGTCGAAGCAGTGGGCATTGGTGCCAG 394749 Query 221236 CAGCAGACTGTTGCG 221250 || || |||||||| Sbjct 394750 CAACAAGCTGTTGCG 394764 >seq279 Length=349471 Score = 154 bits (170), Expect = 3e-32 Identities = 302/450 (67%), Gaps = 13/450 (3%) Strand=Plus/Minus Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 |||| ||||| ||||| ||||| || ||||||||||| ||||| || | || || | | Sbjct 263061 AGCGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGCGCATTCGCCTCTA 263002 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCA 25996 | |||||||||||| || || |||||| || ||| ||| |||||||||||||| Sbjct 263001 TTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCCAACGAGCTCATTT 262942 Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCC 26056 | || |||||||| |||| || || ||||| || || | | | ||| || Sbjct 262941 CTCGTGATGAGGGTCTGCACACCGACTTCGCCTGTCTCCTGTTCTC---TCACCTG---- 262889 Query 26057 ACAAACCTTCTCAAG--AG-ACCGTCTACAG--TATCATCAAAGAGGCTGTGGAGATCGA 26111 | |||| || |||| || | ||| | ||| ||||||| |||||||| | || || Sbjct 262888 AGGAACCGTC-CAAGCAAGCAGCGTGTCCAGGACATCATCACCGAGGCTGTCGCCATTGA 262830 Query 26112 GAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCAT 26171 ||||||||| | ||||||||| || ||||| Sbjct 262829 GAAGGAGTTCTTGACCGAGGCTCTGCCATGCGCCCTCCTCGGCATGAACTCCAACCTCAT 262770 Query 26172 GAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACT 26231 || || ||||| |||| ||| ||||||| ||| ||| | ||||| || | | Sbjct 262769 GAAGCAGTACATCGAGTTTGTTGCCGACCGTCTCCTGGTCGCTCTGGGCAACGAGAAGGT 262710 Query 26232 CTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAA 26291 |||| || | ||||| |||||||| ||||| ||||| || | | || |||||||| Sbjct 262709 TTACAAGTCGTCGAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGTGGCAAGACCAA 262650 Query 26292 CTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 ||||||||| ||| | ||||| ||||| || Sbjct 262649 CTTCTTTGAGAAGCGTGTCGGTGACTACCA 262620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928833363598400