Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq334 259 6e-64 seq279 118 1e-21 >seq334 Length=742376 Score = 259 bits (286), Expect = 6e-64 Identities = 1142/1779 (64%), Gaps = 49/1779 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| ||||| ||||||| ||||| |||| ||| || || || | || ||| Sbjct 396048 CCACAGCACATGATCATGCGTGTCGCTGTCGGTATCTGGGGAGACGATGTCGAAAGGGTC 395989 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||||||| || |||||| | | || | |||| || || | || || | || Sbjct 395988 ATTGAGACATACAACCTGATGTCAAACAAGT-TCTTCACACATGCCTCCCCCACATTGTT 395930 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||||||||| || || || ||| |||| |||||||| ||| || |||||||| Sbjct 395929 CAATGCTGGCACTCCCCAGCCCCAGCTGTCATCATGCTTCCTCGTCGACATGAAGGAGGA 395870 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | || | || || |||| || || | | ||||| ||||| ||| ||| || Sbjct 395869 CAGCATTGAGGGCATTTATGACACCCTAAAGACTTGTGCTATGATCTCCAAGATGGCGGG 395810 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 75508 || ||||| || || | || | | |||| ||| || ||| || || Sbjct 395809 TGGAATTGGTCTGAACGTGCACCGCATCCGTGCCACCGG--CTCATACATCGCTGGCACC 395752 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || ||| || |||| || | |||||||| || || || ||| ||| || || || Sbjct 395751 AACGGTACCTCTAATGGCATCACCCCAATGCTGCGGGTCTTCAACAACACCGCCCGATAC 395692 Query 75569 GTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 || | || | || ||||| | || || |||| ||||| | || |||||| Sbjct 395691 GTCGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTCGCTATCTACCTTGAGCCATGG 395635 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || |||||| || | ||||| ||||| | || || || ||| | || ||| || Sbjct 395634 CACGCCGATGTCTTCGAGTTTCTTGACCTGCGCAAGAATCACGGTAAGGAGGAGATCCGA 395575 Query 75683 TGTAGAGATCTCTTTTCAT-CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGA 75741 | ||||| ||| | | |||| |||||||| || ||||||||||||||||| ||| | Sbjct 395574 GCCCGTGATCT-TTTCCTTGCCCTCTGGATTCCCGATCTTTTCATGAAGCGGGTCGAGAA 395516 Query 75742 GGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGG 75801 | ||| | ||| | || | || || || || || || ||| ||||| || Sbjct 395515 GAACGGTGACTGGACCCTGATGTGCCCTAACGAGTGTCCTGGCCTCGCCGACTGCTACGG 395456 Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGCGAC 75858 |||||||||||| || |||||| |||| || |||||||| | | ||| | | Sbjct 395455 TGAGGAGTTTGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGTCGTGGTCGCAAGACCA- 395397 Query 75859 TGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917 || | ||| | || | | ||| | || |||||| | | ||||| |||||||| | | Sbjct 395396 TGAAG--GCC-CAGAAGCTATGGTATGCCATTCTCGAGGCCCAGACTGAGACTGGCAACC 395340 Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977 | | ||||| |||||||| ||| |||||| ||||| ||||| |||| || | Sbjct 395339 CCTTCATGCTGTACAAGGACCACGCCAACCGGAAGAGCAACCAGAAGAACCTGGGTACCA 395280 Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037 || ||||| ||||||||||| || || | |||||| | | |||||| || | Sbjct 395279 TCCGAAGCTCCAATCTTTGCACTGAGATCATTGAGTACTCTGCCCCAGATGAGGTCGCGG 395220 Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGA-GACTCGCACTTTT 76096 | ||||| ||||| || || || || || ||||| ||| | ||| ||| | Sbjct 395219 TGTGCAACTTGGCCTCCATTGCTCTGCCCGCATATGT---TGACTACGACAACAACTGCT 395163 Query 76097 G--ATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154 | | | | | || || | || || | || | || | ||| ||| Sbjct 395162 ACAACTTCCAGCAGTTGCACGAGGTTACCCAGGTCGTCGTCCGCAACTTGAACAAGATCA 395103 Query 76155 TTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTA 76214 |||| || || || || || || || || ||||| ||| |||||| Sbjct 395102 TTGATGTCAACCACTACCCGGTCAAGGAGGCCTACAACAGCAACATGCGGCACCGACCTA 395043 Query 76215 TTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGC---TACGCATTTG 76271 ||||| | |||||||| ||||| || || | ||| || | | || ||| | || | Sbjct 395042 TTGGTGTCGGTGTTCAGGGTCTTGCCGACGCATTC--TTGGCACTGCGCATAC-CTTTCG 394986 Query 76272 ATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCC 76331 | || || ||| ||| |||| | ||||| || ||||| || ||||| ||| Sbjct 394985 ACTCCCCAGAGGCCCGTGAGCTGAACAAGCAGATCTTCGAGACCATCTACCACGCTGCCC 394926 Query 76332 TGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTC 76391 | || |||| | || | | | || |||| |||||| ||||| | Sbjct 394925 TCACTGCATCAAGTGACATTGCCAAGGTGGAGGGCCCCTACAAGACATACGAGGGCAGCC 394866 Query 76392 CCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT-CAACTAC 76450 ||| || ||||| | || ||||| || |||||| || || || || | | || Sbjct 394865 CCGTCTCGCAAGGCATCCTGCAGTTCGACATGTGG-AATGTCAAGCCCTCCGACCTCTGG 394807 Query 76451 GACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 76510 |||||||||| || ||||| |||||||||| ||| |||| ||||| | ||| || Sbjct 394806 GACTGGGATGCACTGAAGGAGAAGATCAAGGAGACTGGTGTTCGCAACAGCTTGTTGCTG 394747 Query 76511 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCA 76570 ||||||||||| || || || || | |||||| |||| || ||||| |||||||| ||| Sbjct 394746 GCACCAATGCCCACTGCTTCGACGTCGCAAATCCTGGGCAACAATGAGTGCTTTGAGCCA 394687 Query 76571 TACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAG 76630 ||||| | |||||||||| | || | ||||| || ||||| | |||||| Sbjct 394686 TACACCTCCAACATCTACCAGCGACGTGTGCTCGCTGGCGAGTTCCAGGTCGTCAACCCT 394627 Query 76631 CACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATG 76690 ||| ||| || || | || | || | ||||| ||| |||||| | | || Sbjct 394626 TGGCTCCTCAGGGATCTGACAGAGCTCGGCTTGTGGTCTGAGGCCATGAAGAACCGTATC 394567 Query 76691 GTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTC 76750 | | || |||||||||||| || || | ||||| | |||||||||| ||| Sbjct 394566 ATCGCCGAGGATGGTTCCATTCAGAACATTCCTAGCATCCCGGCTGATATCAAGGCCCTC 394507 Query 76751 TACCGCACAGTGTGGGAAATCAAGATGAAAGATG-TCATTG---ACATGGCCGCAGATCG 76806 ||| || || ||||| ||| | ||| | ||||| | ||||| || || || Sbjct 394506 TACAAGACCGTCTGGGAGATC----TCTCAGAGGACCATTGTGCAGATGGCTGCTGACCG 394451 Query 76807 TGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATG-GAAAGTCCAACGATGT 76865 |||| ||||||||||||| ||| | | || | |||| | || ||| | ||| Sbjct 394450 TGGTGCCTTCATTGATCAATCTCAGTCTCTAAACATCCACATGAGGGAG-CCATCAATGG 394392 Query 76866 CCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACT 76925 |||| || | ||||| | || ||||| | || ||||| || || ||||||| Sbjct 394391 GCAAGATCACCAGCATGCACTTCGCCGGCTGGAAGCTCGGTCTCAAGACTGGCATGTACT 394332 Query 76926 ATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 | ||||| | |||| ||| ||| || ||||||| Sbjct 394331 ACCTCCGCACCCAGGCAGCTGCCGCACCCATCCAGTTCA 394293 >seq279 Length=349471 Score = 118 bits (130), Expect = 1e-21 Identities = 299/453 (66%), Gaps = 10/453 (2%) Strand=Plus/Minus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 ||| |||| |||| || |||| || || || ||||| ||||||||| || ||| Sbjct 263070 CCTACGCCCAGCGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGCGCAT 263011 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 || | |||||| ||| | |||||||| || |||||||| ||||| |||||| || | Sbjct 263010 TCGCCTCTATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCCAACG 262951 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTT 65248 | || ||||| || ||||||||||| ||| || || ||| || ||| Sbjct 262950 AGCTCATTTCTCGTGATGAGGGTCTGCACACCGACTTCGCCTGTCTCCTGTTCTCTCACC 262891 Query 65249 TGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTG 65308 || | || | || | | | | |||| | |||| | | ||||| || | |||| Sbjct 262890 TGAGGAACCGTCCAAGCAAGCAGCGTGTCCAGGACATCATCACCGAGGCTGTCGCCATTG 262831 Query 65309 AGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGA 65368 |||| | |||| | || || || ||||| ||| |||| |||||||| | | Sbjct 262830 AGAAGGAGTTCTTGACCGAGGCTCTGCCATGCGCCCTCCTCGGCATGAACTCCAACCTCA 262771 Query 65369 TGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCCA 65428 || ||||||| |||| ||| | || |||||||| | |||| || | | Sbjct 262770 TGAAGCAGTACATCGAGTTTGTTGCCGACCGTCTCCT-GGTCGCTCTGGG----CAACGA 262716 Query 65429 -----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAA 65483 ||| || || ||| || || ||||| ||||| ||||| || | ||| || Sbjct 262715 GAAGGTTTACAAGTCGTCGAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGTGGCAA 262656 Query 65484 GACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 ||||||||||||||||||||| || || ||||| Sbjct 262655 GACCAACTTCTTTGAGAAGCGTGTCGGTGACTA 262623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596562254736800