Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq734 257 2e-63 seq512 190 3e-43 seq1 179 5e-40 seq24 149 8e-31 seq42 127 3e-24 seq334 86.0 8e-12 seq355 84.2 3e-11 >seq734 Length=233485 Score = 257 bits (284), Expect = 2e-63 Identities = 478/698 (68%), Gaps = 3/698 (0%) Strand=Plus/Minus Query 195290 ATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAA 195349 ||| ||| ||| ||||||| ||||| || || || ||||| ||||| ||||| | | Sbjct 196524 ATGGCTCCCGCTGTTGGTATTGATTTGGGTACCACCTACTCTTGTGTGGGTGTCTTCCGT 196465 Query 195350 AATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTT 195409 |||| || | ||||| ||| | || ||||| |||||||| || || || || | || Sbjct 196464 GATGACCGCATTGAGATCATCGCCAACGACCAGGGAAACCGGACCACCCCTTCCTTTGTC 196405 Query 195410 GCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAAC 195469 || || || || | ||| || || | ||||||||||| || || ||| || |||||| Sbjct 196404 GCTTTCACCGACACTGAGCGCCTGATCGGAGATGCCGCCAAGAACCAGGTCGCCATGAAC 196345 Query 195470 CCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAA 195529 || ||| || ||||| || |||||||| | ||||| |||||||| ||| | Sbjct 196344 CCCCACAACACCGTCTTCGATGCGAAGCGGTTGATTGGCCGCAAGTTCCAGGACTCTGAG 196285 Query 195530 GTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCT 195589 ||||| | ||| || ||| ||| | | | ||| | || | | ||| | ||||| Sbjct 196284 GTCCAGGCCGACATGAAGCACTTCCCCT-TCAAGATCATCGAGAAG-GGCGGC-AAGCCC 196228 Query 195590 ATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCT 195649 | || | ||||| || | || |||| || || | || || || ||||| || Sbjct 196227 AACATCGAGGTTGAGTTCAAGGGCGAGACCAAGACCTTCACCCCAGAGGAGATTTCCTCC 196168 Query 195650 ATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGAT 195709 ||||| | | |||||| ||||| || || || | | ||||| || || || | Sbjct 196167 ATGGTCCTCACCAAGATGCGTGAGACCGCTGAGTCCTACCTGGGTGGCACCGTCAACAAC 196108 Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || || | || || || || ||||||| || || || || || || || ||||||||| Sbjct 196107 GCTGTCATCACGGTCCCCGCCTACTTCAACGACTCTCAGCGTCAAGCAACCAAGGACGCT 196048 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829 | | |||||| || || ||| | | | || ||||| || || || || || || ||| Sbjct 196047 GGTCTTATTGCTGGCCTGAACGTTTTGCGTATCATCAACGAGCCTACTGCCGCGGCCATT 195988 Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 || |||||||| |||||||| || | || || || ||||||| || || ||| Sbjct 195987 GCCTATGGTCTCGACAAGAAGGTCGAGGGCGAGCGCAACGTCCTGATCTTCGACCTGGGT 195928 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| || |||||||| || || | || || | ||||| ||||| || ||| | Sbjct 195927 GGTGGTACTTTCGATGTCTCGCTCCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGTCC 195868 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || || ||||| ||||| || ||||| || || ||||| Sbjct 195867 ACCGCCGGTGACACTCACCTGGGTGGCGAGGACTTCGA 195830 >seq512 Length=287951 Score = 190 bits (210), Expect = 3e-43 Identities = 180/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||| || || || || ||||| || || || ||||||||||| ||||| | Sbjct 18411 GTATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATTACCCTCGAGGTCGAGTCCT 18352 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 ||||||| ||||| || |||| ||||||| || || ||||| ||||| || || || | Sbjct 18351 CAGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACC 18292 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||| || || || |||||||| || ||||| || ||||| || |||||| | || |||| Sbjct 18291 AGCAGCGTCTGATCTTTGCTGGAAAGCAGCTCGAGGATGGGCGAACCCTCTCCGACTACA 18232 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || | || ||||| |||||||| ||||| ||||| | || || |||||| Sbjct 18231 ACATCCAGAAGGAATCTACTCTTCACCTGGTTCTCCGCCTCCGTGGTGGT 18182 Score = 181 bits (200), Expect = 1e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || || || |||||||| ||||| ||||| || Sbjct 18637 ATGCAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACCCTTGAGGTCGAGTCCTCC 18578 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| ||| |||| ||||||| || || ||||| ||||| || || || ||| Sbjct 18577 GATACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 18518 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || ||||| ||||| || || ||||| || || || || |||||| | || |||||| Sbjct 18517 CAGCGCCTTATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 18458 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 |||||||||||||||| || || || || || | ||||| || ||| Sbjct 18457 ATTCAAAAGGAGTCTACCCTCCATCTCGTCCTCCGTCTTCGTGGCGGT 18410 >seq1 Length=1124325 Score = 179 bits (198), Expect = 5e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || || ||||||||||| ||||| ||||| || Sbjct 67468 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCC 67527 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| ||||||| || || |||||||||||||| || || ||| Sbjct 67528 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 67587 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || |||||| | || |||||| Sbjct 67588 CAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 67647 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTG 172090 | || |||||||| || || ||||| || || | || || ||||||| Sbjct 67648 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGCCTGCGCGGTGGTG 67696 >seq24 Length=629884 Score = 149 bits (164), Expect = 8e-31 Identities = 142/182 (78%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929 ||| ||||| ||||| || || || ||||||||||| ||||| ||||| || ||||| || Sbjct 219239 CTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCCTCTGACACCAT 219298 Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989 ||| ||| |||| ||||||| || || ||||| |||||||| || || ||||| ||| | Sbjct 219299 CGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGATT 219358 Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049 || || || || || |||||||| ||||| || ||||| | || |||||| | || || Sbjct 219359 GATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAA 219418 Query 172050 GG 172051 || Sbjct 219419 GG 219420 >seq42 Length=142415 Score = 127 bits (140), Expect = 3e-24 Identities = 195/278 (70%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || ||||| || || || || ||||||| || || || ||||| || ||||| || Sbjct 34426 GCCGTTGTTACCGTCCCCGCGTACTTCAACGACAACCAGCGCCAGGCTACCAAGGATGCC 34485 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829 | ||| || ||||| ||| || | ||| ||||||| || || || ||||| || Sbjct 34486 GGCATTATCGCCGGTCTCAACGTCCTCCGTATTGTCAATGAGCCCACGGCCGCTGCTATC 34545 Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 || |||||||||||||||| | |||| | || | | | ||| ||||| ||| Sbjct 34546 GCATATGGTCTGGACAAGACCGAGGAGGGCGAGCGTCAGATCATCGTCTACGATCTTGGT 34605 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| || ||||| || || ||| ||| || || | ||||| || |||| Sbjct 34606 GGTGGTACCTTCGATGTATCCCTGCTCTCTATCGACCAGGGCGTCTTCGAGGTCTTGGCT 34665 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| ||||| || ||||| |||||||| || ||||| Sbjct 34666 ACTGCCGGTGACACCCATCTTGGTGGTGAGGACTTCGA 34703 >seq334 Length=742376 Score = 86.0 bits (94), Expect = 8e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 79256 GCACCAATGCCCACTGCTTCGACGGCTCAGATCCTCGGTAATAATGAGTGTTTTGAACCA 79315 |||||||||||||||||||||||| | || ||||| || || |||||||| ||||| ||| Sbjct 394746 GCACCAATGCCCACTGCTTCGACGTCGCAAATCCTGGGCAACAATGAGTGCTTTGAGCCA 394687 Query 79316 TACACTACAAACATATA 79332 ||||| | ||||| || Sbjct 394686 TACACCTCCAACATCTA 394670 >seq355 Length=28827 Score = 84.2 bits (92), Expect = 3e-11 Identities = 199/300 (66%), Gaps = 3/300 (1%) Strand=Plus/Plus Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722 |||||||||||| ||| || | |||| || | || | | || || | || | Sbjct 25661 AGATGAAGGAGATTGCCGAGACCAAGCTGGGCAAGAAGGTTGAGAAGGCTGTCATCACCG 25720 Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782 | || || ||||||| || || || ||||| || ||||| || | | | || | | Sbjct 25721 TCCCCGCCTACTTCAACGACAACCAGCGTCAGGCTACCAAGGATGCCGGTTCCATCTCCG 25780 Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842 |||| ||| || | || ||||| || || || || || || |||||||| ||||| | Sbjct 25781 GTCTGAACGTCCTCCGTATCATCAACGAGCCCACCGCTGCCGCTATTGCTTACGGTCTCG 25840 Query 195843 ACAAGAACAAGG---ACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899 | |||||| || | || || || |||||| ||||||||||| ||||| | Sbjct 25841 GCTCCAACAAGTCCAACAAGGAGCGCAACGTCCTGATCTACGATCTCGGTGGCGGTACCT 25900 Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959 | ||||| || || || || ||| |||| || | ||| || || |||||||||| Sbjct 25901 TCGATGTGTCCCTCCTGAACATTCAAGGAGGCGTCTTCACCGTTCGCGCGACTGCTGGTG 25960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657854300069200