Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq734 257 2e-63
seq512 190 3e-43
seq1 179 5e-40
seq24 149 8e-31
seq42 127 3e-24
seq334 86.0 8e-12
seq355 84.2 3e-11
>seq734
Length=233485
Score = 257 bits (284), Expect = 2e-63
Identities = 478/698 (68%), Gaps = 3/698 (0%)
Strand=Plus/Minus
Query 195290 ATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAA 195349
||| ||| ||| ||||||| ||||| || || || ||||| ||||| ||||| | |
Sbjct 196524 ATGGCTCCCGCTGTTGGTATTGATTTGGGTACCACCTACTCTTGTGTGGGTGTCTTCCGT 196465
Query 195350 AATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTT 195409
|||| || | ||||| ||| | || ||||| |||||||| || || || || | ||
Sbjct 196464 GATGACCGCATTGAGATCATCGCCAACGACCAGGGAAACCGGACCACCCCTTCCTTTGTC 196405
Query 195410 GCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAAC 195469
|| || || || | ||| || || | ||||||||||| || || ||| || ||||||
Sbjct 196404 GCTTTCACCGACACTGAGCGCCTGATCGGAGATGCCGCCAAGAACCAGGTCGCCATGAAC 196345
Query 195470 CCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAA 195529
|| ||| || ||||| || |||||||| | ||||| |||||||| ||| |
Sbjct 196344 CCCCACAACACCGTCTTCGATGCGAAGCGGTTGATTGGCCGCAAGTTCCAGGACTCTGAG 196285
Query 195530 GTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCT 195589
||||| | ||| || ||| ||| | | | ||| | || | | ||| | |||||
Sbjct 196284 GTCCAGGCCGACATGAAGCACTTCCCCT-TCAAGATCATCGAGAAG-GGCGGC-AAGCCC 196228
Query 195590 ATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCT 195649
| || | ||||| || | || |||| || || | || || || ||||| ||
Sbjct 196227 AACATCGAGGTTGAGTTCAAGGGCGAGACCAAGACCTTCACCCCAGAGGAGATTTCCTCC 196168
Query 195650 ATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGAT 195709
||||| | | |||||| ||||| || || || | | ||||| || || || |
Sbjct 196167 ATGGTCCTCACCAAGATGCGTGAGACCGCTGAGTCCTACCTGGGTGGCACCGTCAACAAC 196108
Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769
|| || | || || || || ||||||| || || || || || || || |||||||||
Sbjct 196107 GCTGTCATCACGGTCCCCGCCTACTTCAACGACTCTCAGCGTCAAGCAACCAAGGACGCT 196048
Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829
| | |||||| || || ||| | | | || ||||| || || || || || || |||
Sbjct 196047 GGTCTTATTGCTGGCCTGAACGTTTTGCGTATCATCAACGAGCCTACTGCCGCGGCCATT 195988
Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889
|| |||||||| |||||||| || | || || || ||||||| || || |||
Sbjct 195987 GCCTATGGTCTCGACAAGAAGGTCGAGGGCGAGCGCAACGTCCTGATCTTCGACCTGGGT 195928
Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949
|||||||| || |||||||| || || | || || | ||||| ||||| || ||| |
Sbjct 195927 GGTGGTACTTTCGATGTCTCGCTCCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGTCC 195868
Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
|| || ||||| ||||| || ||||| || || |||||
Sbjct 195867 ACCGCCGGTGACACTCACCTGGGTGGCGAGGACTTCGA 195830
>seq512
Length=287951
Score = 190 bits (210), Expect = 3e-43
Identities = 180/230 (78%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
||||||| ||||| || || || || ||||| || || || ||||||||||| ||||| |
Sbjct 18411 GTATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATTACCCTCGAGGTCGAGTCCT 18352
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
||||||| ||||| || |||| ||||||| || || ||||| ||||| || || || |
Sbjct 18351 CAGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACC 18292
Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039
|||| || || || |||||||| || ||||| || ||||| || |||||| | || ||||
Sbjct 18291 AGCAGCGTCTGATCTTTGCTGGAAAGCAGCTCGAGGATGGGCGAACCCTCTCCGACTACA 18232
Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
|| | || ||||| |||||||| ||||| ||||| | || || ||||||
Sbjct 18231 ACATCCAGAAGGAATCTACTCTTCACCTGGTTCTCCGCCTCCGTGGTGGT 18182
Score = 181 bits (200), Expect = 1e-40
Identities = 177/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||| ||||| ||||| || || || || |||||||| ||||| ||||| ||
Sbjct 18637 ATGCAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACCCTTGAGGTCGAGTCCTCC 18578
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || ||||| ||| |||| ||||||| || || ||||| ||||| || || || |||
Sbjct 18577 GATACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 18518
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| || ||||| ||||| || || ||||| || || || || |||||| | || ||||||
Sbjct 18517 CAGCGCCTTATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 18458
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
|||||||||||||||| || || || || || | ||||| || |||
Sbjct 18457 ATTCAAAAGGAGTCTACCCTCCATCTCGTCCTCCGTCTTCGTGGCGGT 18410
>seq1
Length=1124325
Score = 179 bits (198), Expect = 5e-40
Identities = 177/229 (77%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||| ||||| ||||| || || || ||||||||||| ||||| ||||| ||
Sbjct 67468 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCC 67527
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| ||||| || |||| ||||||| || || |||||||||||||| || || |||
Sbjct 67528 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 67587
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| || || || || || || || ||||| || || || || |||||| | || ||||||
Sbjct 67588 CAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 67647
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTG 172090
| || |||||||| || || ||||| || || | || || |||||||
Sbjct 67648 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGCCTGCGCGGTGGTG 67696
>seq24
Length=629884
Score = 149 bits (164), Expect = 8e-31
Identities = 142/182 (78%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929
||| ||||| ||||| || || || ||||||||||| ||||| ||||| || ||||| ||
Sbjct 219239 CTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCCTCTGACACCAT 219298
Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989
||| ||| |||| ||||||| || || ||||| |||||||| || || ||||| ||| |
Sbjct 219299 CGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGATT 219358
Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049
|| || || || || |||||||| ||||| || ||||| | || |||||| | || ||
Sbjct 219359 GATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAA 219418
Query 172050 GG 172051
||
Sbjct 219419 GG 219420
>seq42
Length=142415
Score = 127 bits (140), Expect = 3e-24
Identities = 195/278 (70%), Gaps = 0/278 (0%)
Strand=Plus/Plus
Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769
|| ||||| || || || || ||||||| || || || ||||| || ||||| ||
Sbjct 34426 GCCGTTGTTACCGTCCCCGCGTACTTCAACGACAACCAGCGCCAGGCTACCAAGGATGCC 34485
Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829
| ||| || ||||| ||| || | ||| ||||||| || || || ||||| ||
Sbjct 34486 GGCATTATCGCCGGTCTCAACGTCCTCCGTATTGTCAATGAGCCCACGGCCGCTGCTATC 34545
Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889
|| |||||||||||||||| | |||| | || | | | ||| ||||| |||
Sbjct 34546 GCATATGGTCTGGACAAGACCGAGGAGGGCGAGCGTCAGATCATCGTCTACGATCTTGGT 34605
Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949
|||||||| || ||||| || || ||| ||| || || | ||||| || ||||
Sbjct 34606 GGTGGTACCTTCGATGTATCCCTGCTCTCTATCGACCAGGGCGTCTTCGAGGTCTTGGCT 34665
Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
||||| ||||| || ||||| |||||||| || |||||
Sbjct 34666 ACTGCCGGTGACACCCATCTTGGTGGTGAGGACTTCGA 34703
>seq334
Length=742376
Score = 86.0 bits (94), Expect = 8e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 79256 GCACCAATGCCCACTGCTTCGACGGCTCAGATCCTCGGTAATAATGAGTGTTTTGAACCA 79315
|||||||||||||||||||||||| | || ||||| || || |||||||| ||||| |||
Sbjct 394746 GCACCAATGCCCACTGCTTCGACGTCGCAAATCCTGGGCAACAATGAGTGCTTTGAGCCA 394687
Query 79316 TACACTACAAACATATA 79332
||||| | ||||| ||
Sbjct 394686 TACACCTCCAACATCTA 394670
>seq355
Length=28827
Score = 84.2 bits (92), Expect = 3e-11
Identities = 199/300 (66%), Gaps = 3/300 (1%)
Strand=Plus/Plus
Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722
|||||||||||| ||| || | |||| || | || | | || || | || |
Sbjct 25661 AGATGAAGGAGATTGCCGAGACCAAGCTGGGCAAGAAGGTTGAGAAGGCTGTCATCACCG 25720
Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782
| || || ||||||| || || || ||||| || ||||| || | | | || | |
Sbjct 25721 TCCCCGCCTACTTCAACGACAACCAGCGTCAGGCTACCAAGGATGCCGGTTCCATCTCCG 25780
Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842
|||| ||| || | || ||||| || || || || || || |||||||| ||||| |
Sbjct 25781 GTCTGAACGTCCTCCGTATCATCAACGAGCCCACCGCTGCCGCTATTGCTTACGGTCTCG 25840
Query 195843 ACAAGAACAAGG---ACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899
| |||||| || | || || || |||||| ||||||||||| ||||| |
Sbjct 25841 GCTCCAACAAGTCCAACAAGGAGCGCAACGTCCTGATCTACGATCTCGGTGGCGGTACCT 25900
Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959
| ||||| || || || || ||| |||| || | ||| || || ||||||||||
Sbjct 25901 TCGATGTGTCCCTCCTGAACATTCAAGGAGGCGTCTTCACCGTTCGCGCGACTGCTGGTG 25960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657854300069200
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