Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq512 116 3e-21 seq1 109 5e-19 >seq512 Length=287951 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || ||||| ||||| || || || | Sbjct 18409 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATTACCCTCGAGGTCGAGTCCTCA 18350 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 18349 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 18290 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||||||||| || || ||||| |||||| | ||| | | || || || ||| Sbjct 18289 CAGCGTCTGATCTTTGCTGGAAAGCAGCTCGAGGATGGGCGAACCCTCTCCGACTACAAC 18230 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || |||||||| || || ||| |||| Sbjct 18229 ATCCAGAAGGAATCTACTCTTCACCTGGT 18201 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || || || || || || || || || || || || || Sbjct 18640 ACCATGCAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACCCTTGAGGTCGAGTCC 18581 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 |||| || | || | || || |||||||| ||||| || || || || || || Sbjct 18580 TCCGATACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGAC 18521 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || || | ||||||||||| || ||||| ||||| | | | | || || || Sbjct 18520 CAGCAGCGCCTTATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTAC 18461 Query 24881 AACATTCAAAAGGAATCGACACTACA 24906 |||||||||||||| || || || || Sbjct 18460 AACATTCAAAAGGAGTCTACCCTCCA 18435 >seq1 Length=1124325 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || ||||| || || || || || | || Sbjct 67468 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCC 67527 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || || || || || Sbjct 67528 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 67587 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| ||||| || ||||| ||||| | | | | || || || ||| Sbjct 67588 CAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 67647 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 || || ||||| || || || ||| |||| |||| ||||||| || || Sbjct 67648 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGCCTGCGCGGTGGTGG 67697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449892060635800