Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq122 188 1e-41 seq112 134 2e-25 seq279 131 3e-24 seq152 109 9e-18 seq334 105 1e-16 seq92 104 4e-16 seq288 87.8 3e-11 seq978 86.0 1e-10 >seq122 Length=94464 Score = 188 bits (208), Expect = 1e-41 Identities = 355/520 (68%), Gaps = 8/520 (2%) Strand=Plus/Plus Query 2018925 GAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCCGTTGCCTAC 2018984 || || ||||| || | | |||||||||||||| || |||| | || | | | Sbjct 74422 GAGAAATACCGTCCCATCTTCCTCGACGACATCGTCGGAAACGTAGAGACCATCGAGCGC 74481 Query 2018985 CTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGC 2019044 |||||| | ||| || ||||||||||| || || | | ||| ||| ||| Sbjct 74482 CTCAAGATCATAGCCAAAGATGGCAACATGCCGCACGTCATCATCAGCGGCATGCCGGGC 74541 Query 2019045 ACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGAC 2019104 | || ||||| || ||| | |||||||| ||| ||| |||||| || | | Sbjct 74542 ATCGGAAAGACGACCAGCGTGCTCTGCCTGGCACGCCAGCTGCTGGGCGACTCCTACAAG 74601 Query 2019105 GAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATC 2019164 ||||| ||||| || ||||| || ||||| ||||| || | ||||| ||||| | Sbjct 74602 GAGGCGGTGCTGGAGCTCAACGCCTCAGATGAGCGAGGAATCGACGTGGTGCGCAACCGG 74661 Query 2019165 ATCAAG--CATCACGCTTCGAAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGAT 2019220 |||||| | || ||| | ||||| || |||||| |||||||||||||| | | Sbjct 74662 ATCAAGGGCTTCGCGC----AGAAGAAGGTCACGCTGCCGGCCGGCCGCCACAAGATCGT 74717 Query 2019221 CATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCAT 2019280 |||||| || ||||||||| || | ||||||| || |||||||| || | ||| || Sbjct 74718 CATCCTGGACGAGGCCGACAGCATGACGTCGGGCGCGCAGCAGGCGCTGAGGCGGACGAT 74777 Query 2019281 GGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCAT 2019340 ||| | ||| ||||||||||||| ||||| | || |||||| || | | |||| Sbjct 74778 GGAGATCTACTCCAACACGACGCGCTTTGCCTTCGCGTGCAACCAATCCAACAAGATCAT 74837 Query 2019341 CGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGAT 2019400 ||| | || ||| || || || ||| |||| | ||||| || || |||| |||| | Sbjct 74838 CGAGCCACTGCAGTCGCGGTGTGCGATCCTGCGGTACGCGCGGCTGACAGACGGCCAGGT 74897 Query 2019401 CGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGTC 2019440 | ||| ||| |||| ||||| ||||| |||||| Sbjct 74898 GGTGAAGCGCCTGATGCAGATCATCGAGGCCGAGAAGGTC 74937 >seq112 Length=900038 Score = 134 bits (148), Expect = 2e-25 Identities = 106/127 (83%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688 ||||| ||| | |||||||| ||||||||| | ||||||||| | || || ||| | || Sbjct 490949 CTCTTCGAGATCATCCTCGCAGCCAACTACATGGACATCAAGGCGCTGCTTGATGTCGGC 491008 Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748 |||||||| ||||||||| | |||||||||||||| || ||||| || |||||||| ||| Sbjct 491009 TGCAAGACGGTGGCCAACATGATCAAGGGCAAGTCCCCAGAGGAGATTCGCAAGACGTTT 491068 Query 2035749 AACATCA 2035755 ||||||| Sbjct 491069 AACATCA 491075 >seq279 Length=349471 Score = 131 bits (144), Expect = 3e-24 Identities = 190/265 (72%), Gaps = 5/265 (2%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| ||| || |||||||||||||| ||| Sbjct 262606 TGACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGA 262665 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCG--CACCC 794008 | ||||| |||||| | ||| ||||| | || | ||| ||||||| || Sbjct 262666 GAGAGATGTTCTCCATGAAGTCGAAGGGGTTCGACGACTTGTAAACCTTCTCGTTGCCCA 262725 Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 |||||| | || || |||||||| || || || |||||||| ||||||| || ||| Sbjct 262726 GAGCGA--CCAGGAGACGGTCGGCAACAAACTCGATGTACTGCTTCATGAGGTTGGAGTT 262783 Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 |||||||| ||| || ||||| | |||| | | ||||| ||||| || |||| || Sbjct 262784 CATGCCGAGGAGGGCGCATGGCAGAGCCTCGGTCAAGAACTCCTTCTCAATGGCGACAGC 262843 Query 794129 CTCGATGATGATCTGCCTGGGCACG 794153 |||| ||||||| | ||||| |||| Sbjct 262844 CTCGGTGATGATGT-CCTGGACACG 262867 Score = 102 bits (112), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 794582 CCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGA 794641 |||| ||||||| ||||||||||||||| |||||||| ||||| ||||||||||| || | Sbjct 263225 CCGGCTCCTTGATGTAGGTGTCGATGAGAAGCGAGTACGTCTCAGAGTGGATGTTCTCCA 263284 Query 794642 TGGCGATCTGGAAGCCATAAAAGCAG 794667 | |||||||||||| || |||||| Sbjct 263285 TCATGATCTGGAAGCCGTAGAAGCAG 263310 >seq152 Length=84808 Score = 109 bits (120), Expect = 9e-18 Identities = 198/282 (70%), Gaps = 11/282 (4%) Strand=Plus/Plus Query 2411383 AGATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGC 2411442 || || ||||||||| || |||||||| |||||||||| ||| ||||||||| Sbjct 59072 AGGTCGATCTTGGAGTTGGGGTCGCTGGCCGACATCTTGCCGCCCTGC---AGGCCCGGC 59128 Query 2411443 ACCAGCGGGTTGAGCAGGTGGATGCGC-TTGC-GGTAGCCCAGCGCCGGCAGGTGGTCGC 2411500 |||| ||||| | | ||| ||||| |||| |||| |||||| |||||| || Sbjct 59129 ACCATGGGGTTCATGATGTG--TGCGCGTTGCCGGTACCCCAGCTTCGGCAGCCACTCCT 59186 Query 2411501 GCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGT 2411560 ||| | || | |||||||||||| ||||| ||||| | || ||||| |||| Sbjct 59187 TTGCAGCTGTGAACAGCTTGCGCTGGTCCACGCCGCCGAACTGCACATCCACGTCCAGGT 59246 Query 2411561 GCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTT-GCGG 2411619 ||||||||| ||| |||||| || |||||| | || | | || | ||| || | Sbjct 59247 ACTGCTCGTCCAGGACCTGCAGGATCGGGTACAGCAGCCCGGACAAAGGGGCGTTGGCCG 59306 Query 2411620 TCCATCTTGACCACCTGGGCGGCGGCCT--TTTGCGCCGTGC 2411659 | | |||||| |||| ||| |||||| || ||| ||||| Sbjct 59307 T-CTGCTTGACGACCTCAGCGCCGGCCTTCTTGGCGTCGTGC 59347 >seq334 Length=742376 Score = 105 bits (116), Expect = 1e-16 Identities = 285/437 (65%), Gaps = 10/437 (2%) Strand=Plus/Plus Query 2071581 GACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTTGCTGGTC 2071638 || ||| ||||| || |||| | ||| |||| |||||||||| ||||||||| || Sbjct 395251 GATCTCAGTGCAAAGATTGGAG--CTTCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTC 395308 Query 2071639 AGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACG 2071698 ||||| || |||||||| ||||||| |||| || ||||| |||| ||| || Sbjct 395309 CGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCTGGGCCTCGAGA 395368 Query 2071699 ATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCT-CG--CGCGGCCCTNNNNNNNN 2071755 ||||| |||| | | | || || |||| | || | || |||| Sbjct 395369 ATGGCATACCATAGCTTCTGGGCCTTCAT---GGTCTTGCGACCACGACCCTCCTTCTCG 395425 Query 2071756 NNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCG 2071815 |||| || ||||| | | |||| ||| ||| ||||| || |||| Sbjct 395426 TACTGCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGACACTCG 395485 Query 2071816 GACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCAC 2071875 ||||| | || | |||||| ||| || | || || ||| || || ||| Sbjct 395486 TTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAGATCGGGA 395545 Query 2071876 GTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTC 2071935 |||| ||| | || ||||| || || ||| |||||||||| ||||| ||||| | Sbjct 395546 ATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTACCGTGATTCTTGCGC 395605 Query 2071936 AGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCC 2071995 ||||| || | |||| || ||||||||||| ||||| |||||| || ||||| || Sbjct 395606 AGGTCAAGAAACTCGAAGACATCGGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACCG 395665 Query 2071996 TTGCGCTTGCCGCCGCC 2072012 |||||| ||| || Sbjct 395666 GGACGCTTGTTGCCACC 395682 Score = 91.5 bits (100), Expect = 2e-12 Identities = 175/258 (68%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| || || || |||| ||| ||||| || ||||| || | ||| || || Sbjct 395683 CTGGTCGACGTATCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGGGTGATGCCATTAGA 395742 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||||||||| || | ||| | ||| | ||| || | |||| || | || Sbjct 395743 GGTACCGTTGGTGCCAGCGATGTATGAGCCGGTGGCACGGATGCGGTGCACGTTCAGACC 395802 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || || ||| ||||||||| | || || | || || || || || |||||||| Sbjct 395803 AATTCCACCCGCCATCTTGGAGATCATAGCACAAGTCTTTAGGGTGTCATAAATGCCCTC 395862 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| |||||||||| | || ||||| || || || || | | ||||| Sbjct 395863 AATGCTGTCCTCCTTCATGTCGACGAGGAAGCATGATGACAGCTGGGGCTGGGGAGTGCC 395922 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 |||||||| | ||||| Sbjct 395923 AGCATTGAACAATGTGGG 395940 >seq92 Length=107393 Score = 104 bits (114), Expect = 4e-16 Identities = 121/160 (76%), Gaps = 4/160 (3%) Strand=Plus/Minus Query 1485547 GTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGC--GGCCGG 1485604 ||||||||||| |||| | ||| ||| |||||| || || || || || || Sbjct 9788 GTCTGGATCTCTCGGGAGGAGATGGTGGACTTCTTGTT-GTAGGCAGCAAGCTTGGACG- 9731 Query 1485605 CCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATT 1485664 |||||||| ||| ||| |||| ||||||||||| |||||||||| ||| ||||| | Sbjct 9730 CCTCGGTGGCGACGCGCTCGAAGATGTCGTTGACGAACGAGTTCAGGATGGACATGGCAC 9671 Query 1485665 TGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||||||| || ||||||||| ||||||||||| || Sbjct 9670 GGTTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGAC 9631 >seq288 Length=41953 Score = 87.8 bits (96), Expect = 3e-11 Identities = 93/120 (78%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 2233091 GTCGCCTTTCCCACCGAGACCGTCTATGGCCTCGGCGCCGACGCGGCG-TCAGACGAGGC 2233149 ||||| || ||||| || || ||||| ||||||||||| || || || ||| || || Sbjct 19468 GTCGCATTCCCCACAGAAACAGTCTACGGCCTCGGCGCAGATGCAACGCGCAG-CGCCGC 19526 Query 2233150 CGTACAGCGCATCTTTGACGCCAAGGGCCGACCGTCCAACAACCCGATCATCGTGCACGT 2233209 ||| || |||||| | |||||||||||| || || ||||||| ||||||||||||| Sbjct 19527 CGTCAAGGGCATCTACGCCGCCAAGGGCCGGCCCTCGGACAACCCCCTCATCGTGCACGT 19586 >seq978 Length=188393 Score = 86.0 bits (94), Expect = 1e-10 Identities = 125/176 (71%), Gaps = 12/176 (7%) Strand=Plus/Plus Query 429567 AACCGGCAGCCGTCGCTCCACATGGGGTCGATGCTCAACCA------CAAGGTGGTGCCC 429620 ||||| ||||| ||||| |||| || ||| ||| | || |||||| |||| Sbjct 142418 AACCGACAGCCCTCGCTACACAAGGAGTCCATGATGGGGCATCGCGTCAAGGTCATGCC- 142476 Query 429621 ATGCCCGGTCGCACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTT 429680 || | | ||| |||||||| ||| | |||| || | |||||||| |||||| Sbjct 142477 ATACTC-----CACATTCCGGCTGAACTTATCCGTCACCTCTCCATACAACGCTGACTTT 142531 Query 429681 GACGGCGACGAGATGAACCTGCACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGT 429736 |||||||| ||||||||||| ||||| ||||| ||||| | |||| || || || Sbjct 142532 GACGGCGATGAGATGAACCTCCACGTTCCCCAAACGGAGGAGACACGTGCTGAGGT 142587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916141621057415