Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq122 188 1e-41
seq112 134 2e-25
seq279 131 3e-24
seq152 109 9e-18
seq334 105 1e-16
seq92 104 4e-16
seq288 87.8 3e-11
seq978 86.0 1e-10
>seq122
Length=94464
Score = 188 bits (208), Expect = 1e-41
Identities = 355/520 (68%), Gaps = 8/520 (2%)
Strand=Plus/Plus
Query 2018925 GAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCCGTTGCCTAC 2018984
|| || ||||| || | | |||||||||||||| || |||| | || | | |
Sbjct 74422 GAGAAATACCGTCCCATCTTCCTCGACGACATCGTCGGAAACGTAGAGACCATCGAGCGC 74481
Query 2018985 CTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGC 2019044
|||||| | ||| || ||||||||||| || || | | ||| ||| |||
Sbjct 74482 CTCAAGATCATAGCCAAAGATGGCAACATGCCGCACGTCATCATCAGCGGCATGCCGGGC 74541
Query 2019045 ACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGAC 2019104
| || ||||| || ||| | |||||||| ||| ||| |||||| || | |
Sbjct 74542 ATCGGAAAGACGACCAGCGTGCTCTGCCTGGCACGCCAGCTGCTGGGCGACTCCTACAAG 74601
Query 2019105 GAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATC 2019164
||||| ||||| || ||||| || ||||| ||||| || | ||||| ||||| |
Sbjct 74602 GAGGCGGTGCTGGAGCTCAACGCCTCAGATGAGCGAGGAATCGACGTGGTGCGCAACCGG 74661
Query 2019165 ATCAAG--CATCACGCTTCGAAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGAT 2019220
|||||| | || ||| | ||||| || |||||| |||||||||||||| | |
Sbjct 74662 ATCAAGGGCTTCGCGC----AGAAGAAGGTCACGCTGCCGGCCGGCCGCCACAAGATCGT 74717
Query 2019221 CATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCAT 2019280
|||||| || ||||||||| || | ||||||| || |||||||| || | ||| ||
Sbjct 74718 CATCCTGGACGAGGCCGACAGCATGACGTCGGGCGCGCAGCAGGCGCTGAGGCGGACGAT 74777
Query 2019281 GGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCAT 2019340
||| | ||| ||||||||||||| ||||| | || |||||| || | | ||||
Sbjct 74778 GGAGATCTACTCCAACACGACGCGCTTTGCCTTCGCGTGCAACCAATCCAACAAGATCAT 74837
Query 2019341 CGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGAT 2019400
||| | || ||| || || || ||| |||| | ||||| || || |||| |||| |
Sbjct 74838 CGAGCCACTGCAGTCGCGGTGTGCGATCCTGCGGTACGCGCGGCTGACAGACGGCCAGGT 74897
Query 2019401 CGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGTC 2019440
| ||| ||| |||| ||||| ||||| ||||||
Sbjct 74898 GGTGAAGCGCCTGATGCAGATCATCGAGGCCGAGAAGGTC 74937
>seq112
Length=900038
Score = 134 bits (148), Expect = 2e-25
Identities = 106/127 (83%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688
||||| ||| | |||||||| ||||||||| | ||||||||| | || || ||| | ||
Sbjct 490949 CTCTTCGAGATCATCCTCGCAGCCAACTACATGGACATCAAGGCGCTGCTTGATGTCGGC 491008
Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748
|||||||| ||||||||| | |||||||||||||| || ||||| || |||||||| |||
Sbjct 491009 TGCAAGACGGTGGCCAACATGATCAAGGGCAAGTCCCCAGAGGAGATTCGCAAGACGTTT 491068
Query 2035749 AACATCA 2035755
|||||||
Sbjct 491069 AACATCA 491075
>seq279
Length=349471
Score = 131 bits (144), Expect = 3e-24
Identities = 190/265 (72%), Gaps = 5/265 (2%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || ||| ||| || |||||||||||||| |||
Sbjct 262606 TGACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGA 262665
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCG--CACCC 794008
| ||||| |||||| | ||| ||||| | || | ||| ||||||| ||
Sbjct 262666 GAGAGATGTTCTCCATGAAGTCGAAGGGGTTCGACGACTTGTAAACCTTCTCGTTGCCCA 262725
Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068
|||||| | || || |||||||| || || || |||||||| ||||||| || |||
Sbjct 262726 GAGCGA--CCAGGAGACGGTCGGCAACAAACTCGATGTACTGCTTCATGAGGTTGGAGTT 262783
Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128
|||||||| ||| || ||||| | |||| | | ||||| ||||| || |||| ||
Sbjct 262784 CATGCCGAGGAGGGCGCATGGCAGAGCCTCGGTCAAGAACTCCTTCTCAATGGCGACAGC 262843
Query 794129 CTCGATGATGATCTGCCTGGGCACG 794153
|||| ||||||| | ||||| ||||
Sbjct 262844 CTCGGTGATGATGT-CCTGGACACG 262867
Score = 102 bits (112), Expect = 1e-15
Identities = 74/86 (86%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 794582 CCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGA 794641
|||| ||||||| ||||||||||||||| |||||||| ||||| ||||||||||| || |
Sbjct 263225 CCGGCTCCTTGATGTAGGTGTCGATGAGAAGCGAGTACGTCTCAGAGTGGATGTTCTCCA 263284
Query 794642 TGGCGATCTGGAAGCCATAAAAGCAG 794667
| |||||||||||| || ||||||
Sbjct 263285 TCATGATCTGGAAGCCGTAGAAGCAG 263310
>seq152
Length=84808
Score = 109 bits (120), Expect = 9e-18
Identities = 198/282 (70%), Gaps = 11/282 (4%)
Strand=Plus/Plus
Query 2411383 AGATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGC 2411442
|| || ||||||||| || |||||||| |||||||||| ||| |||||||||
Sbjct 59072 AGGTCGATCTTGGAGTTGGGGTCGCTGGCCGACATCTTGCCGCCCTGC---AGGCCCGGC 59128
Query 2411443 ACCAGCGGGTTGAGCAGGTGGATGCGC-TTGC-GGTAGCCCAGCGCCGGCAGGTGGTCGC 2411500
|||| ||||| | | ||| ||||| |||| |||| |||||| |||||| ||
Sbjct 59129 ACCATGGGGTTCATGATGTG--TGCGCGTTGCCGGTACCCCAGCTTCGGCAGCCACTCCT 59186
Query 2411501 GCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGT 2411560
||| | || | |||||||||||| ||||| ||||| | || ||||| ||||
Sbjct 59187 TTGCAGCTGTGAACAGCTTGCGCTGGTCCACGCCGCCGAACTGCACATCCACGTCCAGGT 59246
Query 2411561 GCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTT-GCGG 2411619
||||||||| ||| |||||| || |||||| | || | | || | ||| || |
Sbjct 59247 ACTGCTCGTCCAGGACCTGCAGGATCGGGTACAGCAGCCCGGACAAAGGGGCGTTGGCCG 59306
Query 2411620 TCCATCTTGACCACCTGGGCGGCGGCCT--TTTGCGCCGTGC 2411659
| | |||||| |||| ||| |||||| || ||| |||||
Sbjct 59307 T-CTGCTTGACGACCTCAGCGCCGGCCTTCTTGGCGTCGTGC 59347
>seq334
Length=742376
Score = 105 bits (116), Expect = 1e-16
Identities = 285/437 (65%), Gaps = 10/437 (2%)
Strand=Plus/Plus
Query 2071581 GACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTTGCTGGTC 2071638
|| ||| ||||| || |||| | ||| |||| |||||||||| ||||||||| ||
Sbjct 395251 GATCTCAGTGCAAAGATTGGAG--CTTCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTC 395308
Query 2071639 AGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACG 2071698
||||| || |||||||| ||||||| |||| || ||||| |||| ||| ||
Sbjct 395309 CGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCTGGGCCTCGAGA 395368
Query 2071699 ATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCT-CG--CGCGGCCCTNNNNNNNN 2071755
||||| |||| | | | || || |||| | || | || ||||
Sbjct 395369 ATGGCATACCATAGCTTCTGGGCCTTCAT---GGTCTTGCGACCACGACCCTCCTTCTCG 395425
Query 2071756 NNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCG 2071815
|||| || ||||| | | |||| ||| ||| ||||| || ||||
Sbjct 395426 TACTGCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGACACTCG 395485
Query 2071816 GACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCAC 2071875
||||| | || | |||||| ||| || | || || ||| || || |||
Sbjct 395486 TTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAGATCGGGA 395545
Query 2071876 GTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTC 2071935
|||| ||| | || ||||| || || ||| |||||||||| ||||| ||||| |
Sbjct 395546 ATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTACCGTGATTCTTGCGC 395605
Query 2071936 AGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCC 2071995
||||| || | |||| || ||||||||||| ||||| |||||| || ||||| ||
Sbjct 395606 AGGTCAAGAAACTCGAAGACATCGGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACCG 395665
Query 2071996 TTGCGCTTGCCGCCGCC 2072012
|||||| ||| ||
Sbjct 395666 GGACGCTTGTTGCCACC 395682
Score = 91.5 bits (100), Expect = 2e-12
Identities = 175/258 (68%), Gaps = 0/258 (0%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||||||||| || || || |||| ||| ||||| || ||||| || | ||| || ||
Sbjct 395683 CTGGTCGACGTATCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGGGTGATGCCATTAGA 395742
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
||||||||||| || | ||| | ||| | ||| || | |||| || | ||
Sbjct 395743 GGTACCGTTGGTGCCAGCGATGTATGAGCCGGTGGCACGGATGCGGTGCACGTTCAGACC 395802
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| || || ||| ||||||||| | || || | || || || || || ||||||||
Sbjct 395803 AATTCCACCCGCCATCTTGGAGATCATAGCACAAGTCTTTAGGGTGTCATAAATGCCCTC 395862
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| ||| |||||||||| | || ||||| || || || || | | |||||
Sbjct 395863 AATGCTGTCCTCCTTCATGTCGACGAGGAAGCATGATGACAGCTGGGGCTGGGGAGTGCC 395922
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
|||||||| | |||||
Sbjct 395923 AGCATTGAACAATGTGGG 395940
>seq92
Length=107393
Score = 104 bits (114), Expect = 4e-16
Identities = 121/160 (76%), Gaps = 4/160 (3%)
Strand=Plus/Minus
Query 1485547 GTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGC--GGCCGG 1485604
||||||||||| |||| | ||| ||| |||||| || || || || || ||
Sbjct 9788 GTCTGGATCTCTCGGGAGGAGATGGTGGACTTCTTGTT-GTAGGCAGCAAGCTTGGACG- 9731
Query 1485605 CCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATT 1485664
|||||||| ||| ||| |||| ||||||||||| |||||||||| ||| ||||| |
Sbjct 9730 CCTCGGTGGCGACGCGCTCGAAGATGTCGTTGACGAACGAGTTCAGGATGGACATGGCAC 9671
Query 1485665 TGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
||||||||| || ||||||||| ||||||||||| ||
Sbjct 9670 GGTTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGAC 9631
>seq288
Length=41953
Score = 87.8 bits (96), Expect = 3e-11
Identities = 93/120 (78%), Gaps = 2/120 (2%)
Strand=Plus/Plus
Query 2233091 GTCGCCTTTCCCACCGAGACCGTCTATGGCCTCGGCGCCGACGCGGCG-TCAGACGAGGC 2233149
||||| || ||||| || || ||||| ||||||||||| || || || ||| || ||
Sbjct 19468 GTCGCATTCCCCACAGAAACAGTCTACGGCCTCGGCGCAGATGCAACGCGCAG-CGCCGC 19526
Query 2233150 CGTACAGCGCATCTTTGACGCCAAGGGCCGACCGTCCAACAACCCGATCATCGTGCACGT 2233209
||| || |||||| | |||||||||||| || || ||||||| |||||||||||||
Sbjct 19527 CGTCAAGGGCATCTACGCCGCCAAGGGCCGGCCCTCGGACAACCCCCTCATCGTGCACGT 19586
>seq978
Length=188393
Score = 86.0 bits (94), Expect = 1e-10
Identities = 125/176 (71%), Gaps = 12/176 (7%)
Strand=Plus/Plus
Query 429567 AACCGGCAGCCGTCGCTCCACATGGGGTCGATGCTCAACCA------CAAGGTGGTGCCC 429620
||||| ||||| ||||| |||| || ||| ||| | || |||||| ||||
Sbjct 142418 AACCGACAGCCCTCGCTACACAAGGAGTCCATGATGGGGCATCGCGTCAAGGTCATGCC- 142476
Query 429621 ATGCCCGGTCGCACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTT 429680
|| | | ||| |||||||| ||| | |||| || | |||||||| ||||||
Sbjct 142477 ATACTC-----CACATTCCGGCTGAACTTATCCGTCACCTCTCCATACAACGCTGACTTT 142531
Query 429681 GACGGCGACGAGATGAACCTGCACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGT 429736
|||||||| ||||||||||| ||||| ||||| ||||| | |||| || || ||
Sbjct 142532 GACGGCGATGAGATGAACCTCCACGTTCCCCAAACGGAGGAGACACGTGCTGAGGT 142587
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916141621057415
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |