Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1 147 1e-30
seq512 132 3e-26
seq24 122 6e-23
>seq1
Length=1124325
Score = 147 bits (162), Expect = 1e-30
Identities = 166/220 (75%), Gaps = 8/220 (4%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||||||||| | |||| ||||||||| ||||| ||||| || ||| |||| | ||
Sbjct 67680 CAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTC 67621
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| |||||||||||||| || ||||||||| | || | || ||||||||
Sbjct 67620 CTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 67561
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940
| || || ||||| || | ||||| || | ||| || |||| ||| |
Sbjct 67560 CTGGATCTTGGACTTGAC--AT--TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGA 67505
Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
| ||||| |||||||||||||| || ||||||||||||||
Sbjct 67504 TAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGAT 67465
>seq512
Length=287951
Score = 132 bits (146), Expect = 3e-26
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | ||| |||||| |||||||| ||||| || ||| |||| | ||
Sbjct 18426 AGGACGAGATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 18485
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||| ||||| || || |||||||| | || | |||||||||||
Sbjct 18486 TCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 18545
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || || |||||| |||| ||| ||||||
Sbjct 18546 TGGATCTTGGACTTGACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTC 18605
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || ||||||||||| || ||||||||||||
Sbjct 18606 TTGCCTGTGAGGGTCTTCACGAAGATCTGCATG 18638
Score = 122 bits (134), Expect = 6e-23
Identities = 158/216 (73%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||||| || |||||||| ||||| ||||| || ||| | ||| ||||
Sbjct 18198 AGAACCAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGCCCATCC 18257
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || |||||||| || |||||||| || |||||||| | || | |||||||||||
Sbjct 18258 TCGAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 18317
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||||| || | ||||| || || |||||| || | ||| ||
Sbjct 18318 TGGATCTTGGACTTGAC--AT--TGTCGATGGTGTCTGAGGACTCGACCTCGAGGGTAAT 18373
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| || || || ||||| || |||||||||||
Sbjct 18374 GGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 18409
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | || |||||||| ||||| ||||| ||||| | || ||||
Sbjct 17970 AGCACCAGGTGCAGCGTCGATTCCTTCTGGATGTTGTAGTCAGATAGCGTCCGGCCATCT 18029
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| ||||| || ||||| || || |||||||||||| | || | |||||||||||
Sbjct 18030 TCCAACTGCTTGCCAGCGAAAATGAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTCC 18089
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | |||| || | |||||| |||| || || |||
Sbjct 18090 TGAATCTTAGACTTGACGTTGTCAATCGTGTCCGATGACTCGACCTCAAGCGTGATCGTC 18149
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| ||||| | |||||| || || ||||||||
Sbjct 18150 TTGCCCGTCAAGGTCTTGACGAAAATCTGCAT 18181
>seq24
Length=629884
Score = 122 bits (134), Expect = 6e-23
Identities = 136/182 (75%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| || ||| |||| |||| || || ||||| ||||||||||
Sbjct 219420 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 219361
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
||| ||| ||||||||| | || | ||||||||||| | || || ||||||
Sbjct 219360 TCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 219301
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| || | ||| || ||| || |||| ||| || ||||| ||||| |||||||| || |
Sbjct 219300 CGATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGA 219241
Query 34968 AG 34969
||
Sbjct 219240 AG 219239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325688890159715
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |