Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq334 291 8e-74 seq279 152 5e-32 seq1 134 1e-26 seq512 123 2e-23 seq24 102 8e-17 >seq334 Length=742376 Score = 291 bits (322), Expect = 8e-74 Identities = 1131/1745 (65%), Gaps = 53/1745 (3%) Strand=Plus/Plus Query 148062 TGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGTCGCTTTATCTTCATC 148118 || |||||||| || ||||||||||| ||||| | ||||| ||| | | ||| Sbjct 394433 TGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCACAATG-GTCCTCTGAGAG--ATC 394489 Query 148119 TCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACC 148178 |||||| | |||||||| || |||||||| | | || |||| ||| ||| | Sbjct 394490 TCCCAGACGGTCTTGTAGAGGGCCTTGATATCAGCCGGGATGCTAGGAATGTTCTGAATG 394549 Query 148179 GAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATC 148238 || || | || | || | || ||| | || | | | | |||||| || Sbjct 394550 GAACCATCCTCGGCGATGATACGGTTCTTCATGGCCTCAGACCACAAGCCGAGCTCTGTC 394609 Query 148239 AGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA 148298 || || || || | | || || ||||| |||||||| |||||||| || ||| | Sbjct 394610 AGATCCCTGAGGAGCCAAGGGTTGACGACCTGGAACTCGCCAGCGAGCACACGTCGCTGG 394669 Query 148299 TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTT 148358 || | |||| || | || ||||| |||| |||||||||| || |||| |||| Sbjct 394670 TAGATGTTGGAGGTGTATGGCTCAAAGCACTCATTGTTGCCCAGGATTTGCGACGTCGAA 394729 Query 148359 GCCGTGGGCATGTACGCTACCAGCAGCGAG---TTGCGCAAACCGCGATTTTTTATTTTG 148415 || |||||||| | | |||||| | || ||||| | ||| | || || || Sbjct 394730 GCAGTGGGCATT---GGTGCCAGCAACAAGCTGTTGCGAACACCAGTCTCCTTGATCTTC 394786 Query 148416 CGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGC 148475 |||||| || ||||||||||||| || || | || |||||||||||| ||||| Sbjct 394787 TCCTTCAGTGCATCCCAGTCCCAGAGGTCGGAGGGCTTGACATTCCACATGTCGAACTGC 394846 Query 148476 AGAATGCCGCGGCTAG-CGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGC 148534 || ||||| || || |||||||||||||||| | |||| || || | | || || Sbjct 394847 AGGATGCC-TTGCGAGACGGGGCTGCCCTCGTATGTCTTGTAGGGGCCCTCCACCTTGGC 394905 Query 148535 CAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAG 148594 | || | || ||| || ||| ||| || |||||| || ||| |||| || Sbjct 394906 AATGTCACTTGATGCAGTGAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAG 394965 Query 148595 CAGCGCCGCCGACT-CGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGC 148653 | | | | | || | ||| | || || ||||| || || ||||||||||| | Sbjct 394966 C-TCACGGGCCTCTGGGGAGTCGAAAGGTATGCGCAGTGCCAAGAATGCGTCGGCAAGAC 395024 Query 148654 CCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCG 148713 |||| || || || ||||| || ||||| |||||| | | || || || || Sbjct 395025 CCTGAACACCGACACCAATAGGTCGGTGCCGCATGTTGCTGTTGTAGGCCTCCTTGACCG 395084 Query 148714 GATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTTGTAA--TTC 148770 | ||||||||| || ||||||||| ||||| ||||| || || |||| |||| | Sbjct 395085 GGTAGTGGTTGACATCAATGATCTTGTTCAAG-TTGCGGACGACGACCTGGGTAACCTCG 395143 Query 148771 TGC----GCAGCAATTCAAAATCGTACTTGTCATCTACGATGCATCGGTTCACGGCGATA 148826 ||| || | || | | || ||||| | | | || | || || || Sbjct 395144 TGCAACTGCTGGAAGTTGTAGCAGTTGTTGTCGTAGTCAACATATGCGGGCAGAGCAATG 395203 Query 148827 GAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCAC 148886 ||||| | |||||||| || |||||| ||||| |||||| | |||||| | ||| Sbjct 395204 GAGGCCAAGTTGCACACCGCGACCTCATCTGGGGCAGAGTACTCAATGATCTCAGTGCAA 395263 Query 148887 AGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCC 148946 |||||| || | ||| |||| |||||| || |||||||| | |||| |||| Sbjct 395264 AGATTGGAGCTTCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTCCGGTTGGCGTGGTCC 395323 Query 148947 TTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AACCGATGCA 149004 |||||||||||| | || |||||| || ||| | || | ||| | | || | Sbjct 395324 TTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCTGGGCCTCGAGAATGGCATACCAT--A 395381 Query 149005 GGTCCTGCGCGCGCA----CTTGCTGCTCGTAGCGACCCTCCTGCTCGTA--TAAAGTAT 149058 | | ||| || || ||||| | |||||||||| |||||| ||| Sbjct 395382 GCTTCTGGGCCTTCATGGTCTTGCGAC----CACGACCCTCCTTCTCGTACTGCTCGTAG 395437 Query 149059 ACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACA 149118 | ||| ||| ||| |||| |||||||| ||| |||| || || |||| || ||||||| Sbjct 395438 AGAGC--CTCAAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGACACTCGTTAGGGCACA 395495 Query 149119 TGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCG 149178 | || | ||| | |||| | | || |||||||| || |||||||| | |||||| | Sbjct 395496 TCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAGATCGGGAATCCAGAGGG 395555 Query 149179 CGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGC-GCCCATG-TTGCGGCGCAGGTTGAG 149236 | | || || || | || | | ||| | | || || || |||||||| || Sbjct 395556 CAAGGAAAAGATCACG-GGCTCGGA-TCTCCTCCTTACCGTGATTCTTGCGCAGGTCAAG 395613 Query 149237 CACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC-- 149294 | ||| | || |||||||| ||||||| ||| | |||| || || ||| Sbjct 395614 AAACTCGAAGACATCGGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTT 395673 Query 149295 -TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAAT 149353 ||||| ||||||||||||| || | ||||||| || || || | ||| || || Sbjct 395674 GTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGGGTGAT 395733 Query 149354 GCCACTGGCAGTGCCGTTAGT-AGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCA 149412 |||| | | || ||||| || ||| ||| |||| || || | ||||| Sbjct 395734 GCCATTAGAGGTACCGTTGGTGCCAGC-GATGTATGAGCCGGTGGCACGGATGCGGTGCA 395792 Query 149413 CGTTGACGCCGATGCC-GCCGCCGTACTTTGAGATGGCCGCGC-AGTCGCCGAGCGTCGA 149470 |||| | || || || ||||| | ||| ||||| || | |||| || || Sbjct 395793 CGTTCAGACCAATTCCACCCGCCAT-CTTGGAGATCATAGCACAAGTC-TTTAGGGTGTC 395850 Query 149471 GTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGG 149530 || |||||||| |||||||| ||||||| | || ||||| || ||| || || Sbjct 395851 ATAAATGCCCTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCATGATGACAGCTGGGG 395910 Query 149531 AAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCAT 149590 | ||||| || ||||| |||||| ||| ||||| || | || | ||| Sbjct 395911 CTGGGGAGTGCCAGCATTGAACAATGTGGGGGAGGCATGTGTGAAGAACTTGTTTGACAT 395970 Query 149591 CATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCG 149650 || | ||| | ||| | || | || | || || || ||| || | ||||| || Sbjct 395971 CAGGTTGTATGTCTCAATGACCCTTTCGACATCGTCTCCCCAGATACCGACAGCGACACG 396030 Query 149651 CATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTT 149710 ||| | ||| ||||| || ||||| | ||||| | | ||||| | ||| Sbjct 396031 CATGATCATGTGCTGTGGCCGCTCGACAACTTTACCATCGAGCTTGAGGAGGTATGAACG 396090 Query 149711 TTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGC 149770 || || |||||| |||| || || | |||| ||||||| ||| ||| ||||||| | Sbjct 396091 CTCCAGGGTCTTGAAGCCGAAATATTGGTAGCCAAAGTCACGGTCGTAAACAATGGCCGA 396150 Query 149771 GTCGA 149775 ||||| Sbjct 396151 GTCGA 396155 >seq279 Length=349471 Score = 152 bits (168), Expect = 5e-32 Identities = 354/528 (67%), Gaps = 33/528 (6%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || ||||| || |||||||| ||||| || ||||| | | || ||||| | Sbjct 262619 CTGGTAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGAGAGATGTTCTC 262678 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTT--AAAGTATTTCGGCTGGCCCAACTGTACGAGC 120468 ||| || ||||| ||||| || || ||| | ||| | ||||| || || Sbjct 262679 CATGAAGTCGAAGGGGTTCGACGACTTGTAAACCTTCTCG--TTGCCCAGAGCGACCAGG 262736 Query 120469 AGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAAC 120528 || ||||| || |||||||| ||||||| |||| | | ||||||||| || | Sbjct 262737 AGACGGTCGGCAACAAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGGAGG 262796 Query 120529 GCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG 120588 || |||| ||| || || ||||||||||||||| | || ||||| ||| ||| Sbjct 262797 GCGCATGGCAGAGCCTCGGTCAAGAACTCCTTCTCAATGGCGACAGCCTCGGTGATGATG 262856 Query 120589 GCGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTC----GGT---AGTACAG 120641 | ||| | || |||| || || | |||| ||| || |||| Sbjct 262857 TC---------CTGGACACGCTGCTTG-CTTGGACG---GTTCCTCAGGTGAGAGAACAG 262903 Query 120642 G---CACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698 | || || ||||| |||||||| ||||| || || || || ||||||||| || || Sbjct 262904 GAGACAGGCGAAGTCGGTGTGCAGACCCTCATCACGAGAAATGAGCTCGTTGGAGAAGGT 262963 Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758 |||||| ||||||| ||| | |||||| |||| || | ||| || ||| || Sbjct 262964 CAGGCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATAGAGGCGAATGCGCCACTGAA 263023 Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT 120818 ||| | |||||| ||| || ||||| |||| |||| ||| | || | || || Sbjct 263024 GAAGATGCCCTCGACGGCAGCGAAGGCAACCAGTCGCTGGGCGTAGGT---GGACTCGCG 263080 Query 120819 GTC---GATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 ||| ||||||||| | ||||| |||||||| ||||| | |||||| Sbjct 263081 GTCCTGGATCCACTTGAGAGCCCAGTCGGCCTTCTTGCGGATGCACGG 263128 >seq1 Length=1124325 Score = 134 bits (148), Expect = 1e-26 Identities = 149/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| ||| | ||| |||||||||||||||||| Sbjct 67665 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 67606 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || || |||||||||||||| |||||| ||| Sbjct 67605 GGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGACTT 67546 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||||| | |||||| || | ||||| || ||||| || || || Sbjct 67545 GACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGT 67486 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 67485 CTTCACGAAGATCTGCATG 67467 >seq512 Length=287951 Score = 123 bits (136), Expect = 2e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| ||||| || || || ||||| ||| | ||| |||||||||||| Sbjct 18434 ATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTG 18493 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| || | || || ||||||||||| || |||||||| |||||||| |||||| Sbjct 18494 CTTGCCGGCAAAGATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTT 18553 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||||| | || | || |||| || ||| || || | ||||| ||| ||||| || Sbjct 18554 GGACTTGACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCTGT 18613 Query 133637 CAGAGTTTTTACGAAAATCTGCATGG 133662 || || || ||||| |||||||||| Sbjct 18614 GAGGGTCTTCACGAAGATCTGCATGG 18639 Score = 118 bits (130), Expect = 1e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 |||||||||||||| || || | || || ||||||||||| || |||||||| |||||| Sbjct 18255 TCCTCGAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTG 18314 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||| | || ||| || |||| ||| | | Sbjct 18315 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCTGAGGACTCGACCTCGAGGGTAATG 18374 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| |||||||| || ||||| |||||||| Sbjct 18375 GTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 18409 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || | ||||||||| ||| ||||||| || |||||||| || || || || |||||| Sbjct 18027 TCTTCCAACTGCTTGCCAGCGAAAATGAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTG 18086 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||||| | |||| |||||| | | ||| || || | |||| Sbjct 18087 TCCTGAATCTTAGACTTGACGTTGTCAATCGTGTCCGATGACTCGACCTCAAGCGTGATC 18146 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| |||| || || |||||||||||||| Sbjct 18147 GTCTTGCCCGTCAAGGTCTTGACGAAAATCTGCAT 18181 >seq24 Length=629884 Score = 102 bits (112), Expect = 8e-17 Identities = 132/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| ||| || ||| | | | ||||| ||||||||||| ||| | || Sbjct 219418 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCAAGCTGCTTGCCGGCGAAGAT 219360 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 | ||||||||||| || || ||||| |||||||| |||||| ||||| | || Sbjct 219359 CAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTC 219300 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | ||||| | || |||||| || | ||||| || ||||| ||||| || || ||||| Sbjct 219299 GATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAA 219240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483414847881400