Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq512 84.2 5e-11
seq1 84.2 5e-11
>seq512
Length=287951
Score = 84.2 bits (92), Expect = 5e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | || || || |||||||| | || || || || |||
Sbjct 18178 CAGATTTTCGTCAAGACCTTGACGGGCAAGACGATCACGCTTGAGGTCGAGTCATCGGAC 18119
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| |||||||| || || || |||||| || ||| |||
Sbjct 18118 ACGATTGACAACGTCAAGTCTAAGATTCAGGACAAGGAGGGAATTCCACCAGACCAGCAA 18059
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || || ||||| || ||||||||||||||||| |||| | | || |||||| ||
Sbjct 18058 CGTCTCATTTTCGCTGGCAAGCAGTTGGAAGATGGCCGGACGCTATCTGACTACAACATC 17999
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| || || || || ||||| ||
Sbjct 17998 CAGAAGGAATCGACGCTGCACCTGGT 17973
>seq1
Length=1124325
Score = 84.2 bits (92), Expect = 5e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || || ||||| | || ||||| ||| ||||| ||||
Sbjct 67483 AAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCCGACACCATCGACAAT 67542
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || ||||| ||| || ||| || | || ||||||
Sbjct 67543 GTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAGCAGCGTCTGATCTTC 67602
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || || || | || | |||| |||||| ||||||| |||||
Sbjct 67603 GCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCC 67662
Query 206365 ACTCTTCACCTTGT 206378
|| || ||||| ||
Sbjct 67663 ACCCTGCACCTGGT 67676
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181805885052185
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |