Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq512 84.2 5e-11 seq1 84.2 5e-11 >seq512 Length=287951 Score = 84.2 bits (92), Expect = 5e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || |||||||| | || || || || ||| Sbjct 18178 CAGATTTTCGTCAAGACCTTGACGGGCAAGACGATCACGCTTGAGGTCGAGTCATCGGAC 18119 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| |||||||| || || || |||||| || ||| ||| Sbjct 18118 ACGATTGACAACGTCAAGTCTAAGATTCAGGACAAGGAGGGAATTCCACCAGACCAGCAA 18059 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || ||||| || ||||||||||||||||| |||| | | || |||||| || Sbjct 18058 CGTCTCATTTTCGCTGGCAAGCAGTTGGAAGATGGCCGGACGCTATCTGACTACAACATC 17999 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| || || || || ||||| || Sbjct 17998 CAGAAGGAATCGACGCTGCACCTGGT 17973 >seq1 Length=1124325 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || ||||| | || ||||| ||| ||||| |||| Sbjct 67483 AAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCCGACACCATCGACAAT 67542 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || ||||| ||| || ||| || | || |||||| Sbjct 67543 GTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAGCAGCGTCTGATCTTC 67602 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | || || || | || | |||| |||||| ||||||| ||||| Sbjct 67603 GCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCC 67662 Query 206365 ACTCTTCACCTTGT 206378 || || ||||| || Sbjct 67663 ACCCTGCACCTGGT 67676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181805885052185