Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq334 215 5e-51 seq1 82.4 7e-11 >seq334 Length=742376 Score = 215 bits (238), Expect = 5e-51 Identities = 983/1537 (64%), Gaps = 39/1537 (3%) Strand=Plus/Plus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| || || |||||||| || |||||||||| | || | ||| ||| | ||| Sbjct 394631 TTGACGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGC 394690 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 ||||| ||||||| ||||| | ||||| | ||| | || || ||||| |||| | Sbjct 394691 TCAAAGCACTCATTGTTGCCCAGGATTTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGC 394750 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072 ||||| || || | ||| | | ||| || ||||||| | | ||||||||| Sbjct 394751 AACAAGCTGTTGCGAACACCAGTCTCCTTGATCTTCTCCTTCAGTGCATCCCAGTCCCAG 394810 Query 147073 A--TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGAC 147130 | ||| |||||| | || |||||||||||| |||| || | ||| | | |||| | Sbjct 394811 AGGTCG--GAGGGCTTGACATTCCACATGTCGAACTGCAGGATGCCTTGCGAGACGGGGC 394868 Query 147131 TGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCG 147190 |||| || | || ||||| || || || || | |||| ||| ||| | Sbjct 394869 TGCCCTCGTATGTCTTGTAGGGGCCCTCCACCTTGGCAATGTCACTTGATGCAGTGAGGG 394928 Query 147191 CTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAG--GACGGTCGCTTCTTCGCTCTC 147248 | | | ||| ||||| ||| ||| || ||||| || |||| || ||| | || Sbjct 394929 CAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGG--GCCTCTGGGGAGTC 394986 Query 147249 GTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGG 147308 | |||| || ||||| || || || ||||| | |||||| | |||||| || ||||| Sbjct 394987 GAAAGGTATGCGCAGTGCCAAGAATGCGTCGGCAAGACCCTGAACACCGACACCAATAGG 395046 Query 147309 TCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT-ATGGGATAGTGGTTGCGATCAATAA 147367 ||| ||| ||||||| | || ||| | | || ||||||||| |||||| | Sbjct 395047 TCGGTGCCGCATGTTGCTGTTGTAGGC-CTCCTTGACCGGGTAGTGGTTGACATCAATGA 395105 Query 147368 TCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATA-- 147425 ||||||| | ||| || || || || | || | | | | || ||| | || Sbjct 395106 TCTTGTTCAAGTTGCGGACGACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGC 395165 Query 147426 AG-TCCCGTCTTCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGG 147484 || | ||| | | || || || | || || || || |||| ||||| || | Sbjct 395166 AGTTGTTGTCGTAGTCA---ACATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACACCG 395222 Query 147485 CCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGA 147544 | ||| || | | | ||||| | ||| || | ||| || ||| || | ||| Sbjct 395223 CGACCTCATCTGGGGCAGAGTACTCAATGATCTCAGTGCAAAGATTGGAGCTTCGGATGG 395282 Query 147545 CTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTC 147604 |||| || | ||| ||||| ||||| ||| ||| ||| | |||||| | || Sbjct 395283 TACCCAGGTTCTTCTGGTTGCTCTTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGT 395342 Query 147605 CGCCGGTCTCGACTTGCGTTTC---AACGATAAACCTATGCAGGTCCTGCGCTCGCACCC 147661 ||| ||||| || | || || | | ||| || || | ||| || || Sbjct 395343 TGCCAGTCTCAGTCTGGGCCTCGAGAATGGCATACC-AT--AGCTTCTGGGCCTTCATGG 395399 Query 147662 GCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGT 147721 || ||| || ||||| || |||||| ||||||| | ||||||||| || |||| Sbjct 395400 TCTTGCGACCACGACCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCAAACTCCTCACCGT 395459 Query 147722 AGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGT 147781 |||| ||||| ||||| ||||||| | || |||||||| | ||| ||| | | Sbjct 395460 AGCAGTCGGCGAGGCCAGGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCT 395519 Query 147782 TAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGC 147841 || || ||| || ||||| || | ||| || || | |||||| || ||| | Sbjct 395520 CGACCCGCTTCATGAAAAGATCGGGAATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGA 395579 Query 147842 AATCCTC---GGCGCCCATGTTGCGTTTCAAATTAAG-CACGCTATAGATGTCGGCGTGC 147897 ||||| || | ||||| || | ||| || | | ||| ||||||||| Sbjct 395580 TCTCCTCCTTACCGTGATTCTTGCG---CAGGTCAAGAAACTCGA-AGACATCGGCGTGC 395635 Query 147898 CAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACATGG 147954 || || |||| ||||| || | ||||| |||| || || ||||||||||| | Sbjct 395636 CATGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAT 395695 Query 147955 CGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTG 148014 || | ||||||| || || |||| ||| || | ||| | | || ||||||||| Sbjct 395696 CGGGCGGTGTTGTTGAAGACCCGCAGCATTGGGGTGATGCCATTAGAGGTACCGTTGGTG 395755 Query 148015 GAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCC-GCCGCC 148073 | ||| | |||| ||| || | ||||||||| | ||||| || ||||| Sbjct 395756 CCAGCGATGTATGAGCCGGTGGCACGGATGCGGTGCACGTTCAGACCAATTCCACCCGCC 395815 Query 148074 GTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGTT 148133 | ||| || || ||| ||| | || || ||||| || |||||||| | Sbjct 395816 AT-CTTGGAGATCATAGCACAAGTCTTTAGGGTGTCATAAATGCCCTCAATGCTGTCCTC 395874 Query 148134 TTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAG 148193 || | | | | | || || || ||| || || | || || || ||| | Sbjct 395875 CTTCATGTCGACGAGGAAGCATGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAACAA 395934 Query 148194 GGTGGGACTCGCGTGCGTAAACAA--TTTTTGACTCATCATGCGATACGTCTCAATAGCG 148251 ||||| || || || || || | ||||| ||||| | || |||||||| | Sbjct 395935 TGTGGGGGAGGCATGTGTGAAGAACTTGTTTGA--CATCAGGTTGTATGTCTCAATGACC 395992 Query 148252 TCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGT 148311 ||||| ||||| || || || | ||||| ||||||| |||||||||||| || Sbjct 395993 CTTTCGACATCGTCTCCCCAGATACCGACAGCGACACGCATGATCATGTGCTGTGGCCGC 396052 Query 148312 TCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAG 148371 ||| |||||| | | || |||||| || ||| | || ||||| ||| | || || Sbjct 396053 TCGACAACTTTACCATCGAGCTTGAGGAGGTATGAACGCTCCAGGGTCTTGAAGCCGAAA 396112 Query 148372 TACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 || | ||| |||| || | |||||| | ||||||| Sbjct 396113 TATTGGTAGCCAAAGTCACGGTCGTAAACAATGGCCG 396149 >seq1 Length=1124325 Score = 82.4 bits (90), Expect = 7e-11 Identities = 152/223 (68%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 |||| ||||| |||| || | | | ||||| || || |||||||||||| | ||| Sbjct 67688 CGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTG 67629 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || || |||||||| || |||| |||| |||||||| || ||||| || |||||| Sbjct 67628 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCT 67569 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || || || || || || | | || | || |||| | |||||| || | Sbjct 67568 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGG 67509 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGA 132125 || | || || || || || || || | ||| |||||||||| Sbjct 67508 GTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGA 67466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476605331724600