Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq556 154 2e-32 >seq556 Length=684303 Score = 154 bits (170), Expect = 2e-32 Identities = 287/411 (70%), Gaps = 9/411 (2%) Strand=Plus/Plus Query 147105 CACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGG 147163 |||||||||||| ||| | |||||||| |||||||||||||| |||||| || | Sbjct 379777 CACGTAAAACTGCGCAAAC-ATGTGGCAAGGCGGCAGCGCCATCTTCTTCAGGTCGGCCG 379835 Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAA 147223 ||||||| || | | | |||| | | ||||| ||| | || | ||| | Sbjct 379836 GGTTCCACGCGCTCATGATGATGCGCCGGTCGTACGGGTTGTGCTTGAGCTTGTGGATCA 379895 Query 147224 CCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTG-TCCCGCAGTCCACGTACCTG 147282 || ||||||||| |||||||||||| ||||| | | ||| ||| |||||| | Sbjct 379896 CCTCGGCCAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGCTTTCGC-GTCGACGTACTCG 379954 Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342 ||||| || |||| ||||||||| ||||||||||| ||||||||||| | || | ||| Sbjct 379955 GCCCCGAAATGCCGCCACTGGAACCCGTACACTGGGCCCAGGTCGCCCGCCTCGCGGTG- 380013 Query 147343 GAGAAGCCCGCCCGC--TTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTC 147400 | ||||| | ||| | ||| ||||| | ||||||| | |||||||||| || | Sbjct 380014 GCCCAGCCC-CACGCTGTCGAGGTACTCGCGAGACCCGTTGCCGTCCCAGATCTTGACGC 380072 Query 147401 CCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCA 147460 ||| | ||||| | || ||| |||| ||||||||| |||||||| | | Sbjct 380073 CCTGTTCTGAGAGGGACAGCGACGACGTCTCGCCCGCGATGAACCATAGCAGCTCTGCGA 380132 Query 147461 AAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAG-GGGGAACTGGTCC 147510 || || || ||||| | ||| |||||||| || ||| || ||| || Sbjct 380133 GGACGGCCTTCTGGAAGACGCGCTTTGTGGTCAGGAGCGGGTAAATGGGCC 380183 Score = 114 bits (126), Expect = 2e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 146871 AATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCAC 146930 ||||| |||| ||| || || || | ||| ||||||| | |||| | || || Sbjct 379465 AATCTCCAGCTCGGGAAATTCGCGCGGCTCCCTCTCCAGCTGCACCCTCAGCGCGTCGAC 379524 Query 146931 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCC 146990 ||||| |||||||||||||| |||| | |||| | | || || ||| | Sbjct 379525 GTGGTCCGCATAGACGTGCGCGTCGCCCATGACGTGCGTCAGGCTGCCGGGGACGAGGTC 379584 Query 146991 GGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050 |||||| || | ||||| || ||||||||||||||||| || ||||| ||||| || Sbjct 379585 ACACACGTGCGCGATCATGTGCGTCAGCAGCGAGTAGCTGGCGATATTGAAAGGGACGCC 379644 Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 |||||||||||| | || | ||||||||||||||| Sbjct 379645 CAGGCCCATGTCGCAGGAGCGCTGGTACAGCTGGCA 379680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583480815804000