Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq556 154 2e-32
>seq556
Length=684303
Score = 154 bits (170), Expect = 2e-32
Identities = 287/411 (70%), Gaps = 9/411 (2%)
Strand=Plus/Plus
Query 147105 CACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGG 147163
|||||||||||| ||| | |||||||| |||||||||||||| |||||| || |
Sbjct 379777 CACGTAAAACTGCGCAAAC-ATGTGGCAAGGCGGCAGCGCCATCTTCTTCAGGTCGGCCG 379835
Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAA 147223
||||||| || | | | |||| | | ||||| ||| | || | ||| |
Sbjct 379836 GGTTCCACGCGCTCATGATGATGCGCCGGTCGTACGGGTTGTGCTTGAGCTTGTGGATCA 379895
Query 147224 CCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTG-TCCCGCAGTCCACGTACCTG 147282
|| ||||||||| |||||||||||| ||||| | | ||| ||| |||||| |
Sbjct 379896 CCTCGGCCAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGCTTTCGC-GTCGACGTACTCG 379954
Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342
||||| || |||| ||||||||| ||||||||||| ||||||||||| | || | |||
Sbjct 379955 GCCCCGAAATGCCGCCACTGGAACCCGTACACTGGGCCCAGGTCGCCCGCCTCGCGGTG- 380013
Query 147343 GAGAAGCCCGCCCGC--TTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTC 147400
| ||||| | ||| | ||| ||||| | ||||||| | |||||||||| || |
Sbjct 380014 GCCCAGCCC-CACGCTGTCGAGGTACTCGCGAGACCCGTTGCCGTCCCAGATCTTGACGC 380072
Query 147401 CCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCA 147460
||| | ||||| | || ||| |||| ||||||||| |||||||| | |
Sbjct 380073 CCTGTTCTGAGAGGGACAGCGACGACGTCTCGCCCGCGATGAACCATAGCAGCTCTGCGA 380132
Query 147461 AAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAG-GGGGAACTGGTCC 147510
|| || || ||||| | ||| |||||||| || ||| || ||| ||
Sbjct 380133 GGACGGCCTTCTGGAAGACGCGCTTTGTGGTCAGGAGCGGGTAAATGGGCC 380183
Score = 114 bits (126), Expect = 2e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 146871 AATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCAC 146930
||||| |||| ||| || || || | ||| ||||||| | |||| | || ||
Sbjct 379465 AATCTCCAGCTCGGGAAATTCGCGCGGCTCCCTCTCCAGCTGCACCCTCAGCGCGTCGAC 379524
Query 146931 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCC 146990
||||| |||||||||||||| |||| | |||| | | || || ||| |
Sbjct 379525 GTGGTCCGCATAGACGTGCGCGTCGCCCATGACGTGCGTCAGGCTGCCGGGGACGAGGTC 379584
Query 146991 GGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050
|||||| || | ||||| || ||||||||||||||||| || ||||| ||||| ||
Sbjct 379585 ACACACGTGCGCGATCATGTGCGTCAGCAGCGAGTAGCTGGCGATATTGAAAGGGACGCC 379644
Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086
|||||||||||| | || | |||||||||||||||
Sbjct 379645 CAGGCCCATGTCGCAGGAGCGCTGGTACAGCTGGCA 379680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583480815804000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |