Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq122 178 2e-38 seq279 156 6e-32 seq334 113 6e-19 >seq122 Length=94464 Score = 178 bits (196), Expect = 2e-38 Identities = 323/473 (68%), Gaps = 0/473 (0%) Strand=Plus/Minus Query 332852 TGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATG 332911 ||| |||| || || ||| | | |||||||| ||||| || |||||| | ||||||| Sbjct 74894 TGGCCGTCTGTCAGCCGCGCGTACCGCAGGATCGCACACCGCGACTGCAGTGGCTCGATG 74835 Query 332912 ACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATG 332971 | | | || |||||| || | |||||| |||||||| |||| | | ||||| Sbjct 74834 ATCTTGTTGGATTGGTTGCACGCGAAGGCAAAGCGCGTCGTGTTGGAGTAGATCTCCATC 74775 Query 332972 GTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATG 333031 ||| || || ||||| || || ||| ||| | || |||||||||||| ||||||| | Sbjct 74774 GTCCGCCTCAGCGCCTGCTGCGCGCCCGACGTCATGCTGTCGGCCTCGTCCAGGATGACG 74715 Query 333032 ATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTG 333091 ||||||||||| ||| |||||| ||| | ||| ||| | ||||| ||| Sbjct 74714 ATCTTGTGGCGGCCGGCCGGCAGCGTGACCTTCTTCTGCGCGAAGCCCTTGATCCGGTTG 74655 Query 333092 CGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCG 333151 ||||| ||||| | || ||||| || || |||||||| || ||||| ||||| | | | Sbjct 74654 CGCACCACGTCGATTCCTCGCTCATCTGAGGCGTTGAGCTCCAGCACCGCCTCCTTGTAG 74595 Query 333152 GCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGC 333211 | | |||| || ||| |||||||| | ||| || ||||| || |||| ||| Sbjct 74594 GAGTCGCCCAGCAGCTGGCGTGCCAGGCAGAGCACGCTGGTCGTCTTTCCGATGCCCGGC 74535 Query 333212 GGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTCGGCGGCCAGCGCCTTGAGGTAGGCA 333271 || | | || || ||||||||||| || ||| | ||||||| | Sbjct 74534 ATGCCGCTGATGATGACGTGCGGCATGTTGCCATCTTTGGCTATGATCTTGAGGCGCTCG 74475 Query 333272 ACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCGGTACTTTTC 333324 | || | |||| ||||| ||||||||||| | || || ||||| || || Sbjct 74474 ATGGTCTCTACGTTTCCGACGATGTCGTCGAGGAAGATGGGACGGTATTTCTC 74422 >seq279 Length=349471 Score = 156 bits (172), Expect = 6e-32 Identities = 218/301 (72%), Gaps = 5/301 (2%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||| || || ||||| ||||| ||||||||| |||| | Sbjct 263523 GATCTGGCAGATGTAC-AAGAAGCATGAAGCTTCCTTCTGGACTGCCGAGGAGATCGATC 263465 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 || | ||| | | ||||| ||| ||| ||||||||| || | ||| || Sbjct 263464 TCTCCAAGGACCTGCACGACTGGAGCAACCGCCTGACCGACGACGAACGATACTTCGTCT 263405 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||| |||||||||| || ||| || ||||| ||||| ||||||||||| | Sbjct 263404 CCCACATCCTCGCCTTCTT-CGCTGCTTCAGATGGAATCGTCAACGAGAACCTGGTGGAG 263346 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | ||||| || | |||||||| || | || ||||| ||||||||| Sbjct 263345 CGCTTCAGCGGCGAGGTTCAGATCCCAGAGGCGCGCTGCTTCTACGGCTTCCAGATCATG 263286 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || |||||||||||||| || |||||||| || |||||||||||| ||||||| ||| Sbjct 263285 ATGGAGAACATCCACTCTGAGACGTACTCGCTTCTCATCGACACCTACATCAAGGAGCCG 263226 Query 1456072 G 1456072 | Sbjct 263225 G 263225 Score = 120 bits (132), Expect = 4e-21 Identities = 190/266 (71%), Gaps = 5/266 (2%) Strand=Plus/Minus Query 1456510 CGTGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTC 1456569 |||| ||| | | |||||| |||||| |||| || ||||| ||||| | | |||| | Sbjct 262867 CGTGTCCAGG-ACATCATCACCGAGGCTGTCGCCATTGAGAAGGAGTTCTTGACCGAGGC 262809 Query 1456570 GCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTT 1456629 ||||| || ||| ||||||||||| ||| | |||||| |||||||| | | ||| Sbjct 262808 TCTGCCATGCGCCCTCCTCGGCATGAACTCCAAC-CTCATGAAGCAGTACATCG-AGTTT 262751 Query 1456630 GTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCC 1456689 || |||||||| || || | || || ||| | |||||| ||| | || | ||||| Sbjct 262750 GTTGCCGACCGTCTCCTGGTCGCTCTGGGCAAC-GAGAAGGTTTACAAGTCGTCGAACCC 262692 Query 1456690 GTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT 1456749 ||| | |||||| ||||| |||| |||||||||||||| || ||| || || Sbjct 262691 CTTCGACTTCATGGAGAACATCTCTCTCGGTGGCAAGACCAACTTCTTTGAGAAGCGTGT 262632 Query 1456750 -GGCGAGTACGCCAAGGCCGGCGTCA 1456774 || || ||| |||||||| |||| Sbjct 262631 CGGTGACTACCAGAAGGCCGGTGTCA 262606 Score = 86.0 bits (94), Expect = 9e-11 Identities = 115/156 (74%), Gaps = 7/156 (4%) Strand=Plus/Minus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCC--TCGACACTTTGCCGA 1456180 || |||||||||||||| | ||||||||| | ||| || || || || ||| | Sbjct 263116 AAGAAGGCCGACTGGGCTCTCAAGTGGATCCA---GGACCGCGAGTCCAC-CTACGCCCA 263061 Query 1456181 GCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCAT 1456239 ||| || || | ||| || || |||||||||||||| ||| ||| ||| | | || Sbjct 263060 GCGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTGGCGCATTCGCCTCTAT 263001 Query 1456240 CTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 || |||||||||||||| ||||||||||| || || Sbjct 263000 TTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCT 262965 >seq334 Length=742376 Score = 113 bits (124), Expect = 6e-19 Identities = 328/504 (65%), Gaps = 21/504 (4%) Strand=Plus/Minus Query 259682 CACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTTT 259741 |||||||||| ||||| | ||||| ||| ||| |||||||||||| || || Sbjct 396168 CACAAGGAGGAGTTCGACTCGGCCATTGTTTACGACCGTGACTTTGGCTACCAATATTTC 396109 Query 259742 GGTCTGGCGACCTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATT---GTCGTCGAG 259798 || | |||| || || || ||||| ||| || |||| | || |||||| Sbjct 396108 GGCTTCAAGACCCTGGAGCGTTCATACCTCCTCAA---GCTCGATGGTAAAGTTGTCGAG 396052 Query 259799 CGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGAC 259858 ||||| ||| | ||| ||||||||||||| | || | |||| | ||| ||||| Sbjct 396051 CGGCCACAGCACATGATCATGCGTGTCGCTGTCGGTA--TCTGGGGA-GACGATGTCGAA 395995 Query 259859 AATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCA 259918 | | | ||| || ||| | ||||| | |||| ||||| Sbjct 395994 AGGGTCATTGAG------------ACATACAACCTGATGTCAAACAAGTTCTTCACACAT 395947 Query 259919 GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTG 259978 || | ||||| | || ||||| ||||| || | || ||| || || ||||| || Sbjct 395946 GCCTCCCCCACATTGTTCAATGCTGGCACTCCCCAGCCCCAGCTGTCATCATGCTTCCTC 395887 Query 259979 TTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTC 260038 | |||||||||| || || |||||||| |||||||| || ||| || || | Sbjct 395886 GTCGACATGAAGGAGGACAGCATTGAGGGCATTTATGACACCCTAAAGACTTGTGCTATG 395827 Query 260039 ATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCC 260098 ||||||||| ||| || || || ||| | || ||| | || ||| | ||| | Sbjct 395826 ATCTCCAAGATGGCGGGTGGAATTGGTCTGAACGTGCACCGCATCCGTGCCACCGGCTCA 395767 Query 260099 TACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAAC 260158 ||| | || ||||||||||| || || ||| | || ||||| || || || ||| Sbjct 395766 TACATCGCTGGCACCAACGGTACCTCTAATGGCATCACCCCAATGCTGCGGGTCTTCAAC 395707 Query 260159 GACACGGCGCGCTACGTCGACCAG 260182 |||| || || |||||||||||| Sbjct 395706 AACACCGCCCGATACGTCGACCAG 395683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177716194939570