Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1 127 2e-24 seq512 122 9e-23 seq24 84.2 2e-11 >seq1 Length=1124325 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| || ||||| || ||||| ||||| || |||||||||||| | |||| | Sbjct 67685 AGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 67626 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| ||||| || || |||| ||||||||| || || || |||||||| Sbjct 67625 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCTTCC 67566 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | |||||||| || ||||| || || || Sbjct 67565 TTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTG 67506 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | || || ||||| || ||||| Sbjct 67505 ATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 67468 >seq512 Length=287951 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || || |||||||| || |||||||||||| Sbjct 18183 CCACCACGGAGGCGGAGAACCAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAG 18242 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| || || ||||| |||| ||||||||| || || || Sbjct 18243 AGGGTTCGCCCATCCTCGAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGG 18302 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | ||||| || || || || Sbjct 18303 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCTGAGGACTCGACC 18362 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| |||||||| || || || | ||| || ||||| || ||||| Sbjct 18363 TCGAGGGTAATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 18409 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || || || || ||||||||||||||||||||| | |||| | ||| ||| Sbjct 18429 ACGAGATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 18488 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| ||||| || | |||||||| || || || ||||| || || || || Sbjct 18489 AGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 18548 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | || ||||| || || || || || || ||||| || Sbjct 18549 ATCTTGGACTTGACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTG 18608 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || ||||| || ||||| Sbjct 18609 CCTGTGAGGGTCTTCACGAAGATCTGCAT 18637 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| ||||| ||||| |||||||| || ||||||||||| Sbjct 17955 CCACCACGGAGACGAAGCACCAGGTGCAGCGTCGATTCCTTCTGGATGTTGTAGTCAGAT 18014 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || | ||| ||||| || ||||| | ||| ||||| || || || Sbjct 18015 AGCGTCCGGCCATCTTCCAACTGCTTGCCAGCGAAAATGAGACGTTGCTGGTCTGGTGGA 18074 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || ||||| || ||||| ||| | ||||| || || || || Sbjct 18075 ATTCCCTCCTTGTCCTGAATCTTAGACTTGACGTTGTCAATCGTGTCCGATGACTCGACC 18134 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || || || || || |||||||| ||||| Sbjct 18135 TCAAGCGTGATCGTCTTGCCCGTCAAGGTCTTGACGAAAATCTGCAT 18181 >seq24 Length=629884 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || |||||||||||| | |||| | || || ||||| ||||| || || | Sbjct 219420 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 219361 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 |||| |||||||| || || || ||||| || || || || || || ||||| || Sbjct 219360 TCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 219301 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||| || || ||||| || || || || || || || || | || || |||| Sbjct 219300 CGATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGA 219241 Query 134704 A 134704 | Sbjct 219240 A 219240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505392177282200