Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq334 206 4e-48 seq279 96.9 5e-15 >seq334 Length=742376 Score = 206 bits (228), Expect = 4e-48 Identities = 1179/1870 (63%), Gaps = 43/1870 (2%) Strand=Plus/Plus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 || ||||| ||||||| || || | | || || || |||||||| || || || ||| Sbjct 394292 GTGAACTGGATGGGTGCGGCAGCTGCCTGGGTGCGGAGGTAGTACATGCCAGTCTTGAGA 394351 Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGG--AATAACTTGGATCGGCTA 68491 || || |||| ||| ||| ||||| || || | ||| | | | ||| || | Sbjct 394352 CCGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATTGA--TGGCTCCCTCA 394409 Query 68492 TATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTA 68551 | || || || | || ||| |||||| ||||| || || | || || ||||| | | Sbjct 394410 TGTGGATGTTTAGAGACTGAGATTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCA 394469 Query 68552 TAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA 68611 ||| || | |||| || ||||| | ||||| | | ||||||||| | || | Sbjct 394470 CAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATATCAGCCGGGA 394529 Query 68612 GGCTCGTA---TTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCAT 68668 ||| | | || |||||||| ||| | |||| || || ||||| || | ||| Sbjct 394530 TGCTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGATACGGTTCTTCATGGCCTCAG 394589 Query 68669 TCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCC 68728 |||||| ||| || | | | || ||||| || || || | || || || | Sbjct 394590 ACCACAAGCCGAGCTCTGTCAGATCCCTGAGGAGCCAAGGGTTGACGACCTGGAACTCGC 394649 Query 68729 CAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTC 68788 ||| | ||| | || ||| || || ||| ||||| || | | ||||| || | Sbjct 394650 CAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCACTCATTGTTGC 394709 Query 68789 CCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 68848 |||| ||||| | || || ||||| ||||| ||||||| ||| || || || | || || Sbjct 394710 CCAGGATTTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGCAACAAGCTGTTGCGAACAC 394769 Query 68849 CATGTGTTAT-GATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACA 68907 || || | | ||| || || || || | ||| ||||| || || || || ||| Sbjct 394770 CA-GTCTCCTTGATCTTCTCCTTCAGTGCATCCCAGTCCCAGAGGTCGGAGGGCTTGACA 394828 Query 68908 TTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGAT-CCATTATATGTTTCATA 68966 ||||| | ||| | || || || || || | | | | || | ||||| | || Sbjct 394829 TTCCACATGTCGAACTGCAGGATGCC-TTGCGAGACGGGGCTGCCCTCGTATGTCTTGTA 394887 Query 68967 AGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTC 69026 || || ||| | || | |||| ||| | ||| ||| || || || || Sbjct 394888 GGGGCCCTCCACCTTGGCAATGTCACTTGATGCAGTGAGGGCAGCGTGGTAGATGGTCTC 394947 Query 69027 GAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAAT 69086 ||| |||| ||| || || || | || ||| | ||||| || | | | Sbjct 394948 GAAGATCTGCTTGTTCAGCTCACGGGCCTCTGGGGAGTCGAAAGGTATGCGCAGTGCCAA 395007 Query 69087 AAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACT 69146 ||||| || || | |||||||| || | ||| ||||||| || | | | || | | Sbjct 395008 GAATGCGTCGGCAAGACCCTGAACACCGACACCAATAGGTCGGTGCCGCATGTT-GCTGT 395066 Query 69147 TTCAG--CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACT 69204 | || || || || || || | || | ||| || || || || | || ||||| Sbjct 395067 TGTAGGCCTCCTTGACCGGG-TAGTGGTTGACATCAATGATCTTGTTCAAGTTGCGGACG 395125 Query 69205 ACTACTT---TAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATCTA-TAACAAA 69260 || || | ||||| ||| | | | || | | | || | | || || Sbjct 395126 ACGACCTGGGTAACCTCGTGCAACTGCTGGA--AGTTGTAGCAGTTGTTGTCGTAGTCAA 395183 Query 69261 CATATTC----AGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCAT 69316 ||||| | || || | || || | || || || || ||||||| | | | Sbjct 395184 CATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACACCGCGACCTCATCTGGGGCAGAGT 395243 Query 69317 ATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTAC 69376 | | || ||||| || || ||||| | | ||| || ||||| || | ||| || | Sbjct 395244 ACTCAATGATCTCAGTGCAAAGATTGGAGCTTCGGATGGTACCCAGGTTCTTCTGGTTGC 395303 Query 69377 TCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATT 69436 |||| ||| | ||||||||| || || || || | ||||| ||| |||| | | Sbjct 395304 TCTTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCTGGGCCT 395363 Query 69437 CGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAAC---GCTTCTCTT 69493 ||| ||| | | ||| | | || || || ||||||| || | ||| | Sbjct 395364 CGAGAATGGCATACCATAGCTTCTGGGCCTTCAT---GGTCTTGCGACCACGACCCTCCT 395420 Query 69494 TTTCATATTGT--GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGG 69551 | || || || ||| | |||| || || || || || | || | | ||||| Sbjct 395421 TCTCGTACTGCTCGTAGAGAGCC--TCAAACTCCTCACCGTAGCAGTCGGCGAGGCCAGG 395478 Query 69552 ACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAG 69611 ||| || || || ||||||| | ||| || | | | || || || ||||| || || Sbjct 395479 ACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAG 395538 Query 69612 ATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAtt 69671 |||||||||||| || || | || ||||| | || || | || || || || ||| Sbjct 395539 ATCGGGAATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTACCGTGATT 395598 Query 69672 ttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCAT 69731 || || || |||||||| | | ||| | |||||||| || || || || || | Sbjct 395599 CTTGCGCAGGTCAAGAAACTCGAAGACATCGGCGTGCCATGGCTCAAGGTAGATAGCGAA 395658 Query 69732 GACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCT 69791 | | || || || || || || ||||| || | ||||| ||| ||||| || |||| | Sbjct 395659 GGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGTTGAAGACCCG 395718 Query 69792 CAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGC 69851 |||||| || | || |||||||| |||| || || |||| || || || | || Sbjct 395719 CAGCATTGGGGTGATGCCATTAGAGGTACCGTTGGTGCCAGCGATGTATGAGCCGGTGGC 395778 Query 69852 GCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACG 69911 || || | ||||| ||||| || ||||| || ||||| | ||||||| Sbjct 395779 ACGGATGCGGTGCACGTTCAGACCAATTCCACCCGCCATCTTGGAGATCATAGCACAAGT 395838 Query 69912 TTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCT 69971 || | |||||||| || ||||| ||||| || || |||||| | || || || Sbjct 395839 CTTTAGGGTGTCATAAATGCCCTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCATGA 395898 Query 69972 AGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCA 70031 |||| || | || ||| || ||||| || ||||| || || || || ||||| | Sbjct 395899 TGACAGCTGGGGCTGGGGAGTGCCAGCATTGAACAATGTGGGGGAGGCATGTGTGAAGAA 395958 Query 70032 TTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC----CCACTGATGAA 70087 || | || | ||| |||||||| ||||| | ||| | ||| || | | | Sbjct 395959 CTTGTTTGACATCAGGTTGTATGTCTCAATGACCCTTTCGACATCGTCTCCCCAG----A 396014 Query 70088 TTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTT 70147 | || | ||||||||||| | ||| ||||| || || || || |||| || | | Sbjct 396015 TACCGACAGCGACACGCATGATCATGTGCTGTGGCCGCTCGACAACTTTACCATCGAGCT 396074 Query 70148 TCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTT 70207 | | |||||||| ||||| || || || || ||||| | ||| |||||| | | Sbjct 396075 TGAGGAGGTATGAACGCTCCAGGGTCTTGAAGCCGAAATATTGGTAGCCAAAGTCACGGT 396134 Query 70208 CGTAAATAAT 70217 |||||| ||| Sbjct 396135 CGTAAACAAT 396144 >seq279 Length=349471 Score = 96.9 bits (106), Expect = 5e-15 Identities = 147/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 ||||||||||| || || |||||||| | | ||| | ||||| || || || || Sbjct 262908 CAGGCGAAGTCGGTGTGCAGACCCTCATCACGAGAAATGAGCTCGTTGGAGAAGGTCAGG 262967 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 |||||||| || |||||||| |||||||| || || | || || | ||| |||||| Sbjct 262968 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATAGAGGCGAATGCGCCACTGAAGAAG 263027 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATC---ATTATGT 39793 ||||| || || || || || ||||| |||| || |||| | | || | || Sbjct 263028 ATGCCCTCGACGGCAGCGAAGGCAACCAGTCGCTGGGCGTAGGTGGACTCGCGGTCCTGG 263087 Query 39794 ATCCACTTCTGTGCCCAATCAGCTTTCTT 39822 |||||||| | ||||| || || ||||| Sbjct 263088 ATCCACTTGAGAGCCCAGTCGGCCTTCTT 263116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686900342435400