Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq334 206 4e-48
seq279 96.9 5e-15
>seq334
Length=742376
Score = 206 bits (228), Expect = 4e-48
Identities = 1179/1870 (63%), Gaps = 43/1870 (2%)
Strand=Plus/Plus
Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433
|| ||||| ||||||| || || | | || || || |||||||| || || || |||
Sbjct 394292 GTGAACTGGATGGGTGCGGCAGCTGCCTGGGTGCGGAGGTAGTACATGCCAGTCTTGAGA 394351
Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGG--AATAACTTGGATCGGCTA 68491
|| || |||| ||| ||| ||||| || || | ||| | | | ||| || |
Sbjct 394352 CCGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATTGA--TGGCTCCCTCA 394409
Query 68492 TATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTA 68551
| || || || | || ||| |||||| ||||| || || | || || ||||| | |
Sbjct 394410 TGTGGATGTTTAGAGACTGAGATTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCA 394469
Query 68552 TAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA 68611
||| || | |||| || ||||| | ||||| | | ||||||||| | || |
Sbjct 394470 CAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATATCAGCCGGGA 394529
Query 68612 GGCTCGTA---TTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCAT 68668
||| | | || |||||||| ||| | |||| || || ||||| || | |||
Sbjct 394530 TGCTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGATACGGTTCTTCATGGCCTCAG 394589
Query 68669 TCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCC 68728
|||||| ||| || | | | || ||||| || || || | || || || |
Sbjct 394590 ACCACAAGCCGAGCTCTGTCAGATCCCTGAGGAGCCAAGGGTTGACGACCTGGAACTCGC 394649
Query 68729 CAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTC 68788
||| | ||| | || ||| || || ||| ||||| || | | ||||| || |
Sbjct 394650 CAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCACTCATTGTTGC 394709
Query 68789 CCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 68848
|||| ||||| | || || ||||| ||||| ||||||| ||| || || || | || ||
Sbjct 394710 CCAGGATTTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGCAACAAGCTGTTGCGAACAC 394769
Query 68849 CATGTGTTAT-GATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACA 68907
|| || | | ||| || || || || | ||| ||||| || || || || |||
Sbjct 394770 CA-GTCTCCTTGATCTTCTCCTTCAGTGCATCCCAGTCCCAGAGGTCGGAGGGCTTGACA 394828
Query 68908 TTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGAT-CCATTATATGTTTCATA 68966
||||| | ||| | || || || || || | | | | || | ||||| | ||
Sbjct 394829 TTCCACATGTCGAACTGCAGGATGCC-TTGCGAGACGGGGCTGCCCTCGTATGTCTTGTA 394887
Query 68967 AGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTC 69026
|| || ||| | || | |||| ||| | ||| ||| || || || ||
Sbjct 394888 GGGGCCCTCCACCTTGGCAATGTCACTTGATGCAGTGAGGGCAGCGTGGTAGATGGTCTC 394947
Query 69027 GAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAAT 69086
||| |||| ||| || || || | || ||| | ||||| || | | |
Sbjct 394948 GAAGATCTGCTTGTTCAGCTCACGGGCCTCTGGGGAGTCGAAAGGTATGCGCAGTGCCAA 395007
Query 69087 AAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACT 69146
||||| || || | |||||||| || | ||| ||||||| || | | | || | |
Sbjct 395008 GAATGCGTCGGCAAGACCCTGAACACCGACACCAATAGGTCGGTGCCGCATGTT-GCTGT 395066
Query 69147 TTCAG--CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACT 69204
| || || || || || || | || | ||| || || || || | || |||||
Sbjct 395067 TGTAGGCCTCCTTGACCGGG-TAGTGGTTGACATCAATGATCTTGTTCAAGTTGCGGACG 395125
Query 69205 ACTACTT---TAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATCTA-TAACAAA 69260
|| || | ||||| ||| | | | || | | | || | | || ||
Sbjct 395126 ACGACCTGGGTAACCTCGTGCAACTGCTGGA--AGTTGTAGCAGTTGTTGTCGTAGTCAA 395183
Query 69261 CATATTC----AGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCAT 69316
||||| | || || | || || | || || || || ||||||| | | |
Sbjct 395184 CATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACACCGCGACCTCATCTGGGGCAGAGT 395243
Query 69317 ATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTAC 69376
| | || ||||| || || ||||| | | ||| || ||||| || | ||| || |
Sbjct 395244 ACTCAATGATCTCAGTGCAAAGATTGGAGCTTCGGATGGTACCCAGGTTCTTCTGGTTGC 395303
Query 69377 TCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATT 69436
|||| ||| | ||||||||| || || || || | ||||| ||| |||| | |
Sbjct 395304 TCTTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCTGGGCCT 395363
Query 69437 CGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAAC---GCTTCTCTT 69493
||| ||| | | ||| | | || || || ||||||| || | ||| |
Sbjct 395364 CGAGAATGGCATACCATAGCTTCTGGGCCTTCAT---GGTCTTGCGACCACGACCCTCCT 395420
Query 69494 TTTCATATTGT--GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGG 69551
| || || || ||| | |||| || || || || || | || | | |||||
Sbjct 395421 TCTCGTACTGCTCGTAGAGAGCC--TCAAACTCCTCACCGTAGCAGTCGGCGAGGCCAGG 395478
Query 69552 ACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAG 69611
||| || || || ||||||| | ||| || | | | || || || ||||| || ||
Sbjct 395479 ACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAG 395538
Query 69612 ATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAtt 69671
|||||||||||| || || | || ||||| | || || | || || || || |||
Sbjct 395539 ATCGGGAATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTACCGTGATT 395598
Query 69672 ttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCAT 69731
|| || || |||||||| | | ||| | |||||||| || || || || || |
Sbjct 395599 CTTGCGCAGGTCAAGAAACTCGAAGACATCGGCGTGCCATGGCTCAAGGTAGATAGCGAA 395658
Query 69732 GACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCT 69791
| | || || || || || || ||||| || | ||||| ||| ||||| || |||| |
Sbjct 395659 GGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGTTGAAGACCCG 395718
Query 69792 CAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGC 69851
|||||| || | || |||||||| |||| || || |||| || || || | ||
Sbjct 395719 CAGCATTGGGGTGATGCCATTAGAGGTACCGTTGGTGCCAGCGATGTATGAGCCGGTGGC 395778
Query 69852 GCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACG 69911
|| || | ||||| ||||| || ||||| || ||||| | |||||||
Sbjct 395779 ACGGATGCGGTGCACGTTCAGACCAATTCCACCCGCCATCTTGGAGATCATAGCACAAGT 395838
Query 69912 TTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCT 69971
|| | |||||||| || ||||| ||||| || || |||||| | || || ||
Sbjct 395839 CTTTAGGGTGTCATAAATGCCCTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCATGA 395898
Query 69972 AGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCA 70031
|||| || | || ||| || ||||| || ||||| || || || || ||||| |
Sbjct 395899 TGACAGCTGGGGCTGGGGAGTGCCAGCATTGAACAATGTGGGGGAGGCATGTGTGAAGAA 395958
Query 70032 TTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC----CCACTGATGAA 70087
|| | || | ||| |||||||| ||||| | ||| | ||| || | | |
Sbjct 395959 CTTGTTTGACATCAGGTTGTATGTCTCAATGACCCTTTCGACATCGTCTCCCCAG----A 396014
Query 70088 TTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTT 70147
| || | ||||||||||| | ||| ||||| || || || || |||| || | |
Sbjct 396015 TACCGACAGCGACACGCATGATCATGTGCTGTGGCCGCTCGACAACTTTACCATCGAGCT 396074
Query 70148 TCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTT 70207
| | |||||||| ||||| || || || || ||||| | ||| |||||| | |
Sbjct 396075 TGAGGAGGTATGAACGCTCCAGGGTCTTGAAGCCGAAATATTGGTAGCCAAAGTCACGGT 396134
Query 70208 CGTAAATAAT 70217
|||||| |||
Sbjct 396135 CGTAAACAAT 396144
>seq279
Length=349471
Score = 96.9 bits (106), Expect = 5e-15
Identities = 147/209 (70%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676
||||||||||| || || |||||||| | | ||| | ||||| || || || ||
Sbjct 262908 CAGGCGAAGTCGGTGTGCAGACCCTCATCACGAGAAATGAGCTCGTTGGAGAAGGTCAGG 262967
Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736
|||||||| || |||||||| |||||||| || || | || || | ||| ||||||
Sbjct 262968 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATAGAGGCGAATGCGCCACTGAAGAAG 263027
Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATC---ATTATGT 39793
||||| || || || || || ||||| |||| || |||| | | || | ||
Sbjct 263028 ATGCCCTCGACGGCAGCGAAGGCAACCAGTCGCTGGGCGTAGGTGGACTCGCGGTCCTGG 263087
Query 39794 ATCCACTTCTGTGCCCAATCAGCTTTCTT 39822
|||||||| | ||||| || || |||||
Sbjct 263088 ATCCACTTGAGAGCCCAGTCGGCCTTCTT 263116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686900342435400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |