Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq334 235 7e-57 seq279 118 1e-21 >seq334 Length=742376 Score = 235 bits (260), Expect = 7e-57 Identities = 1135/1781 (64%), Gaps = 53/1781 (3%) Strand=Plus/Plus Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390 ||||||| || ||| ||| |||| | ||||| |||||||| || |||||||| | Sbjct 394293 TGAACTGGATGGGTGCGGCAGCTGCCTGGGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 394352 Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CATG 110449 | | ||||| || | ||||| | || |||| ||| | ||| || | |||| Sbjct 394353 CGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATTGATGG-CTCCCTCATG 394411 Query 110450 AAGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATAT---CA 110506 || ||| | | ||| ||| ||||||||| || || | || ||||| | || Sbjct 394412 TGGATGTTTAGAGACTGAGATTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCACA 394471 Query 110507 ATGACATCCTTCATCTTA---ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCT 110563 ||| || ||| | || ||||| || || ||||| |||||||||| | Sbjct 394472 ATGG------TCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATATCAGCC 394525 Query 110564 GGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCC 110623 ||||| | || ||||| |||||||| || | | || | | |||||| || Sbjct 394526 GGGATGCTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGATACGGTTCTTCATGGCC 394585 Query 110624 TTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAAC 110683 | ||||| | || | || | || || ||| ||| |||||| | ||| Sbjct 394586 TCAGACCACAAGCCGAGCTCTGTCAGATCCCTGAGGAGCCAAGGGTTGACGACCTGGAAC 394645 Query 110684 TCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTA 110743 || || ||||| | || | |||||||||| | |||||||| |||||||| ||||| Sbjct 394646 TCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCACTCATTG 394705 Query 110744 TTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGA 110803 || |||| |||||| | || || || || ||||||||||||| ||| | ||||| ||| Sbjct 394706 TTGCCCAGGATTTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGCAACAAGCTGTTGCGA 394765 Query 110804 AGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTC 110862 | ||| |||||||||| ||||| || |||||||||| || | | || || Sbjct 394766 ACACCAGTCTCCTTGATCTTCTCCTTCAGTGCATCCCAGTCCCAGAGGTCGGAGGGCTTG 394825 Query 110863 ACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTC 110922 || |||| ||||||| ||||| || | ||||| || |||| ||||| | || | Sbjct 394826 ACATTCC-ACATGTCGAACTGCAGGATGCCTTGCGAGACGGGGCTGCCCTCGTATGTCTT 394884 Query 110923 ATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGT 110982 |||| || | | | || | |||| || |||| ||||| || ||||| Sbjct 394885 GTAGGGGCCCTCCACCTTGGCAATGTCACTTGATGCAGTGAGGGCAGCGTGGTAGATGGT 394944 Query 110983 TTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA--- 111039 || ||||| | |||| ||| ||| || || || || | ||| ||| Sbjct 394945 CTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCTGGGGAGTCGAAAG-GTATGCGCAGTG 395003 Query 111040 CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATT 111099 | || ||| | || || ||||| |||||||| | ||||||||||| ||| ||||| || Sbjct 395004 CCAAG--AATGCGTCGGCAAGACCCTGAACACCGACACCAATAGGTCGGTGCCGCATGTT 395061 Query 111100 AGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTT 111159 || || || || || || || ||||||| ||| | || Sbjct 395062 GCTGTTGTAGGCCTCCTTGACCGGGTAGTGGTTGACATCAATGATCTTGTTCAAGTTGCG 395121 Query 111160 GGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAA--AGTGCGAGTC-TCTTC 111216 | || | || || | || || | | | | | | ||| ||| | || Sbjct 395122 GACGACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCAGTTGTTGTCGTAGTC 395181 Query 111217 ATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATC 111276 | ||||| || || || || || ||||| ||||| || || |||||| | Sbjct 395182 A---ACATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACACCGCGACCTCATCTGGGGC 395238 Query 111277 TGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTG 111336 | |||||| | || || || || | ||||| || || || |||| ||||| || Sbjct 395239 AGAGTACTCAATGATCTCAGTGCAAAGATTGGAGCTTCGGATGGTACCCAGGTTCTTCTG 395298 Query 111337 GTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 111396 ||| |||||| |||| |||||||| |||||| |||| | || ||||| ||||| Sbjct 395299 GTTGCTCTTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCTG 395358 Query 111397 TGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTGG---CCCGTC 111452 | | |||||| || | ||| | | || | | || |||| ||| | || | Sbjct 395359 GGCCTCGAGAATGGCATACCATAGCTTCTGGGCCTTC----ATGGTCTTGCGACCACGAC 395414 Query 111453 CCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGAC 111512 ||||| |||||||| |||||| || |||||||||||||| ||||| ||| | Sbjct 395415 CCTCCTTCTCGTACTGCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCGAGGC 395474 Query 111513 CTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGA 111572 | || || || || || | || | ||| | ||| | ||| ||||||||||||| Sbjct 395475 CAGGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGA 395534 Query 111573 AAAGGTCTGGAATCCACAGGG-ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCT 111631 |||| || |||||||| |||| | | ||| ||||| | || ||| || | ||| Sbjct 395535 AAAGATCGGGAATCCAGAGGGCAAGGAAA-AGATCACGGGCTCGGATCTCCTCCTTACCG 395593 Query 111632 TGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACT 111691 || || || | ||||| ||||| | || ||| ||||||||||||||||| |||| Sbjct 395594 TGATTCTTGCGCAGGTCAAGAAACTCGAAGACATCGGCGTGCCATGGCTCAAGGTAGATA 395653 Query 111692 GCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTA 111745 |||| | || ||||| ||| | || | || || || || ||| ||| Sbjct 395654 GCGAAGGCACC---GGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGTTG 395710 Query 111746 AATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAG 111803 || || || |||||||| | || |||| || ||| || || || ||| || ||| Sbjct 395711 AAGACCCGCAGCATTGGGGTGATGCCATTAGAGGTACCGTTGGTGCCAGCGATGTATGAG 395770 Query 111804 ATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTT 111863 |||| | | || | || || ||||| || || ||| ||| ||||| Sbjct 395771 --CCGGTGGCACGGATGCGGTGCACGTTCAGACCAATTCCACCCGCCATCTTGGAGATCA 395828 Query 111864 GCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAA 111923 ||||| | | || || |||| || || | || ||||||||| || ||| | Sbjct 395829 TAGCACAAGTCTTTAGGGTGTCATAAATGCCCTCAATGCTGTCCTCCTTCATGTCGACGA 395888 Query 111924 GGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGT 111983 ||||||| |||| ||| || || || ||||||||||| | || || | || | Sbjct 395889 GGAAGCATGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAACAATGTGGGGGAGGCAT 395948 Query 111984 GAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCC 112042 | |||| | || | | |||||| || ||||||||| | ||| || | || || Sbjct 395949 GTGTGAAGA-ACTTGTTTGACATCAGGTTGTATGTCTCAATGACCCTTTCGACATCGTCT 396007 Query 112043 CCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 || ||| |||| ||||| ||||||| ||||| |||||| Sbjct 396008 CCCCAGATACCGACAGCGACACGCATGATCATGTGCTGTGG 396048 >seq279 Length=349471 Score = 118 bits (130), Expect = 1e-21 Identities = 299/453 (66%), Gaps = 10/453 (2%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| ||||| ||||||||||||||||||||||| ||| | || ||||| ||||| Sbjct 262623 TAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGAGAGATGTTCTCCATG 262682 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 122485 ||||| || || ||| || || ||| | | || |||| | |||| Sbjct 262683 AAGTCGAAGGGGTTCGACGACTTGTAAACCTTCTCGTTG----CCCAGAGCGACC-AGGA 262737 Query 122486 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGT 122545 |||| || | ||| |||| ||||||| ||| | |||||||| |||| |||| Sbjct 262738 GACGGTCGGCAACAAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGGAGGG 262797 Query 122546 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 122605 ||||| || || || | |||| | |||||||| | || ||||| | | |||| Sbjct 262798 CGCATGGCAGAGCCTCGGTCAAGAACTCCTTCTCAATGGCGACAGCCTCGGTGATGATGT 262857 Query 122606 CGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACT 122665 | |||| | | | | || | || | || ||| || ||| || | Sbjct 262858 CCTGGACACGCTGCTTGCTTGGACGGTTCCTCAGGTGAGAGAACAGGAGACAGGCGAAGT 262917 Query 122666 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGA 122725 | ||| ||||||||||| || ||||| || || || |||||| || || ||||||| Sbjct 262918 CGGTGTGCAGACCCTCATCACGAGAAATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATGA 262977 Query 122726 GACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCA 122785 | || |||||||| | ||| |||||| | ||||| || ||||||||| ||||| | Sbjct 262978 GGCCACGCTTCTTGAGCCAGAAAATAGAGGCGAATGCGCCACTGAAGAAGATGCCCTCGA 263037 Query 122786 CACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 | || || |||| || || | |||| ||| Sbjct 263038 CGGCAGCGAAGGCAACCAGTCGCTGGGCGTAGG 263070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628024267356000