Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq334 235 7e-57
seq279 118 1e-21
>seq334
Length=742376
Score = 235 bits (260), Expect = 7e-57
Identities = 1135/1781 (64%), Gaps = 53/1781 (3%)
Strand=Plus/Plus
Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390
||||||| || ||| ||| |||| | ||||| |||||||| || |||||||| |
Sbjct 394293 TGAACTGGATGGGTGCGGCAGCTGCCTGGGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 394352
Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CATG 110449
| | ||||| || | ||||| | || |||| ||| | ||| || | ||||
Sbjct 394353 CGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATTGATGG-CTCCCTCATG 394411
Query 110450 AAGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATAT---CA 110506
|| ||| | | ||| ||| ||||||||| || || | || ||||| | ||
Sbjct 394412 TGGATGTTTAGAGACTGAGATTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCACA 394471
Query 110507 ATGACATCCTTCATCTTA---ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCT 110563
||| || ||| | || ||||| || || ||||| |||||||||| |
Sbjct 394472 ATGG------TCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATATCAGCC 394525
Query 110564 GGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCC 110623
||||| | || ||||| |||||||| || | | || | | |||||| ||
Sbjct 394526 GGGATGCTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGATACGGTTCTTCATGGCC 394585
Query 110624 TTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAAC 110683
| ||||| | || | || | || || ||| ||| |||||| | |||
Sbjct 394586 TCAGACCACAAGCCGAGCTCTGTCAGATCCCTGAGGAGCCAAGGGTTGACGACCTGGAAC 394645
Query 110684 TCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTA 110743
|| || ||||| | || | |||||||||| | |||||||| |||||||| |||||
Sbjct 394646 TCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCACTCATTG 394705
Query 110744 TTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGA 110803
|| |||| |||||| | || || || || ||||||||||||| ||| | ||||| |||
Sbjct 394706 TTGCCCAGGATTTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGCAACAAGCTGTTGCGA 394765
Query 110804 AGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTC 110862
| ||| |||||||||| ||||| || |||||||||| || | | || ||
Sbjct 394766 ACACCAGTCTCCTTGATCTTCTCCTTCAGTGCATCCCAGTCCCAGAGGTCGGAGGGCTTG 394825
Query 110863 ACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTC 110922
|| |||| ||||||| ||||| || | ||||| || |||| ||||| | || |
Sbjct 394826 ACATTCC-ACATGTCGAACTGCAGGATGCCTTGCGAGACGGGGCTGCCCTCGTATGTCTT 394884
Query 110923 ATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGT 110982
|||| || | | | || | |||| || |||| ||||| || |||||
Sbjct 394885 GTAGGGGCCCTCCACCTTGGCAATGTCACTTGATGCAGTGAGGGCAGCGTGGTAGATGGT 394944
Query 110983 TTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA--- 111039
|| ||||| | |||| ||| ||| || || || || | ||| |||
Sbjct 394945 CTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCTGGGGAGTCGAAAG-GTATGCGCAGTG 395003
Query 111040 CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATT 111099
| || ||| | || || ||||| |||||||| | ||||||||||| ||| ||||| ||
Sbjct 395004 CCAAG--AATGCGTCGGCAAGACCCTGAACACCGACACCAATAGGTCGGTGCCGCATGTT 395061
Query 111100 AGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTT 111159
|| || || || || || || ||||||| ||| | ||
Sbjct 395062 GCTGTTGTAGGCCTCCTTGACCGGGTAGTGGTTGACATCAATGATCTTGTTCAAGTTGCG 395121
Query 111160 GGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAA--AGTGCGAGTC-TCTTC 111216
| || | || || | || || | | | | | | ||| ||| | ||
Sbjct 395122 GACGACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCAGTTGTTGTCGTAGTC 395181
Query 111217 ATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATC 111276
| ||||| || || || || || ||||| ||||| || || |||||| |
Sbjct 395182 A---ACATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACACCGCGACCTCATCTGGGGC 395238
Query 111277 TGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTG 111336
| |||||| | || || || || | ||||| || || || |||| ||||| ||
Sbjct 395239 AGAGTACTCAATGATCTCAGTGCAAAGATTGGAGCTTCGGATGGTACCCAGGTTCTTCTG 395298
Query 111337 GTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 111396
||| |||||| |||| |||||||| |||||| |||| | || ||||| |||||
Sbjct 395299 GTTGCTCTTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCTG 395358
Query 111397 TGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTGG---CCCGTC 111452
| | |||||| || | ||| | | || | | || |||| ||| | || |
Sbjct 395359 GGCCTCGAGAATGGCATACCATAGCTTCTGGGCCTTC----ATGGTCTTGCGACCACGAC 395414
Query 111453 CCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGAC 111512
||||| |||||||| |||||| || |||||||||||||| ||||| ||| |
Sbjct 395415 CCTCCTTCTCGTACTGCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCGAGGC 395474
Query 111513 CTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGA 111572
| || || || || || | || | ||| | ||| | ||| |||||||||||||
Sbjct 395475 CAGGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGA 395534
Query 111573 AAAGGTCTGGAATCCACAGGG-ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCT 111631
|||| || |||||||| |||| | | ||| ||||| | || ||| || | |||
Sbjct 395535 AAAGATCGGGAATCCAGAGGGCAAGGAAA-AGATCACGGGCTCGGATCTCCTCCTTACCG 395593
Query 111632 TGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACT 111691
|| || || | ||||| ||||| | || ||| ||||||||||||||||| ||||
Sbjct 395594 TGATTCTTGCGCAGGTCAAGAAACTCGAAGACATCGGCGTGCCATGGCTCAAGGTAGATA 395653
Query 111692 GCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTA 111745
|||| | || ||||| ||| | || | || || || || ||| |||
Sbjct 395654 GCGAAGGCACC---GGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGTTG 395710
Query 111746 AATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAG 111803
|| || || |||||||| | || |||| || ||| || || || ||| || |||
Sbjct 395711 AAGACCCGCAGCATTGGGGTGATGCCATTAGAGGTACCGTTGGTGCCAGCGATGTATGAG 395770
Query 111804 ATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTT 111863
|||| | | || | || || ||||| || || ||| ||| |||||
Sbjct 395771 --CCGGTGGCACGGATGCGGTGCACGTTCAGACCAATTCCACCCGCCATCTTGGAGATCA 395828
Query 111864 GCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAA 111923
||||| | | || || |||| || || | || ||||||||| || ||| |
Sbjct 395829 TAGCACAAGTCTTTAGGGTGTCATAAATGCCCTCAATGCTGTCCTCCTTCATGTCGACGA 395888
Query 111924 GGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGT 111983
||||||| |||| ||| || || || ||||||||||| | || || | || |
Sbjct 395889 GGAAGCATGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAACAATGTGGGGGAGGCAT 395948
Query 111984 GAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCC 112042
| |||| | || | | |||||| || ||||||||| | ||| || | || ||
Sbjct 395949 GTGTGAAGA-ACTTGTTTGACATCAGGTTGTATGTCTCAATGACCCTTTCGACATCGTCT 396007
Query 112043 CCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
|| ||| |||| ||||| ||||||| ||||| ||||||
Sbjct 396008 CCCCAGATACCGACAGCGACACGCATGATCATGTGCTGTGG 396048
>seq279
Length=349471
Score = 118 bits (130), Expect = 1e-21
Identities = 299/453 (66%), Gaps = 10/453 (2%)
Strand=Plus/Plus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| ||||| ||||||||||||||||||||||| ||| | || ||||| |||||
Sbjct 262623 TAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGAGAGATGTTCTCCATG 262682
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 122485
||||| || || ||| || || ||| | | || |||| | ||||
Sbjct 262683 AAGTCGAAGGGGTTCGACGACTTGTAAACCTTCTCGTTG----CCCAGAGCGACC-AGGA 262737
Query 122486 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGT 122545
|||| || | ||| |||| ||||||| ||| | |||||||| |||| ||||
Sbjct 262738 GACGGTCGGCAACAAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGGAGGG 262797
Query 122546 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 122605
||||| || || || | |||| | |||||||| | || ||||| | | ||||
Sbjct 262798 CGCATGGCAGAGCCTCGGTCAAGAACTCCTTCTCAATGGCGACAGCCTCGGTGATGATGT 262857
Query 122606 CGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACT 122665
| |||| | | | | || | || | || ||| || ||| || |
Sbjct 262858 CCTGGACACGCTGCTTGCTTGGACGGTTCCTCAGGTGAGAGAACAGGAGACAGGCGAAGT 262917
Query 122666 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGA 122725
| ||| ||||||||||| || ||||| || || || |||||| || || |||||||
Sbjct 262918 CGGTGTGCAGACCCTCATCACGAGAAATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATGA 262977
Query 122726 GACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCA 122785
| || |||||||| | ||| |||||| | ||||| || ||||||||| ||||| |
Sbjct 262978 GGCCACGCTTCTTGAGCCAGAAAATAGAGGCGAATGCGCCACTGAAGAAGATGCCCTCGA 263037
Query 122786 CACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818
| || || |||| || || | |||| |||
Sbjct 263038 CGGCAGCGAAGGCAACCAGTCGCTGGGCGTAGG 263070
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628024267356000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |