Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq334 226 4e-54 >seq334 Length=742376 Score = 226 bits (250), Expect = 4e-54 Identities = 1166/1839 (63%), Gaps = 37/1839 (2%) Strand=Plus/Plus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 ||||||| |||||| || |||| | |||||||||||||| || |||||||| | Sbjct 394293 TGAACTGGATGGGTGCGGCAGCTGCCTGGGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 394352 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTC-CATG 117923 | |||||||| | | ||||| || | |||| | | ||| || | |||| Sbjct 394353 CGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATTGATGG-CTCCCTCATG 394411 Query 117924 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 117983 || ||| | | || |||||||| |||||| || || || || ||||| | | Sbjct 394412 TGGATGTTTAGAGACTGAGATTGATCAATGAAGGCACCACGGTCAGCAGCCATCTG---C 394468 Query 117984 ACATCCTTCATCTT---GATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGG 118040 ||| || ||| ||| ||||| || ||| |||||||| ||| |||||| | ||| Sbjct 394469 ACAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATATCAGCCGGG 394528 Query 118041 ATATCCACGA-TATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTT 118099 || | | || | || || ||||| ||| || | || || | | |||||| ||| Sbjct 394529 ATG-CTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGATACGGTTCTTCATGGCCTC 394587 Query 118100 TGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTC 118159 ||||| | || | || | | |||||| | ||| ||||| || ||||| Sbjct 394588 AGACCACAAGCCGAGCTCTGTCAGATCCCTGAGGAGCCAAGGGTTGACGACCTGGAACTC 394647 Query 118160 ACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTT 118219 || ||||| |||| | | ||||| |||| |||||||||||||||||||||||||| Sbjct 394648 GCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCACTCATTGTT 394707 Query 118220 ACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAG 118279 |||| |||||| | || || || |||||||| ||||||| | | |||||| || | Sbjct 394708 GCCCAGGATTTGCGACGTCGAAGCAGTGGGCATTGGTGCCAGCAACAAGCTGTTGCGAAC 394767 Query 118280 ACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCC 118339 ||| | ||| | || ||||| || || |||||||| || | | || | Sbjct 394768 ACCAGTCTCCTTGATCTTCTCCTTCAGTGCATCCCAGTCCCAGAGGTCGGAGGGCTTGAC 394827 Query 118340 CTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATA 118399 | |||||| || ||||| ||||| ||||| || | || ||||| |||||| || Sbjct 394828 ATTCCACATGTCGAACTGCAGGATGCCTTGCGAGACGGGGCTGCCCTCGTATGTCTTGTA 394887 Query 118400 TGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTC 118459 |||||||| |||| || | || || |||||| ||||| || || || || Sbjct 394888 GGGGCCCTCCACCTTGGCAATGTCACTTGATGCAGTGAGGGCAGCGTGGTAGATGGTCTC 394947 Query 118460 AAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG--GCACAAA 118517 || || | |||| | |||||| ||| || || | | || | | || Sbjct 394948 GAAGATCTGCTTGTTCAGCTCACGGGCCTCTGGGGAGTCGAAAGGTATGCGCAGTGCCAA 395007 Query 118518 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 118577 ||| | || || ||||| || ||||||| ||||| || || || | ||| || Sbjct 395008 --GAATGCGTCGGCAAGACCCTGAACACCGACACCAATAGGTCGGTGCCGCATGTTGCTG 395065 Query 118578 TTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTG 118637 || || || || || || || ||| || | | | || | || | | Sbjct 395066 TTGTAGGCCTCCTTGACCGGGTAGTGGTTGACATCAATGATCTTGTTCAAGTTGCGGACG 395125 Query 118638 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACA 118697 || |||| || | || || | || | | | | | | | | || | | ||| Sbjct 395126 ACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCAGTTGTTGTCGTAGTCAACA 395185 Query 118698 TACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTAC 118757 || || || || || || |||| || ||||| | | |||||| ||| |||| Sbjct 395186 TATGCGGGCAGAGCAATGGAGGCCAAGTTGCACACCGCGACCTCATCTGGGGCAGAGTAC 395245 Query 118758 TCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGAC 118817 || || || || ||||| | || || || ||||| |||| |||||| || || | Sbjct 395246 TCAATGATCTCAGTGCAAAGATTGGAGCTTCGGATGGTACCCAGGTTCTTCTGGTTGCTC 395305 Query 118818 TTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTG 118877 || ||| |||||||| |||||| | || | || ||||| || |||| || | Sbjct 395306 TTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCTGGGCCTCG 395365 Query 118878 AGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTG---GCTCGCCCCTCTTC 118933 ||||| || | ||| | | || | || || ||| ||| | || ||||| | Sbjct 395366 AGAATGGCATACCATAGCTTCTG-GGCCTTCA---TGGTCTTGCGACCACGACCCTCCTT 395421 Query 118934 CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGC 118993 |||||||| |||||| || |||||||| ||||| | || | ||| || || Sbjct 395422 CTCGTACTGCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGACA 395481 Query 118994 CTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 119053 || | ||||| | || | ||| | ||| || ||| |||||||||||||| || || Sbjct 395482 CTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAGATC 395541 Query 119054 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 119113 || |||||||| || ||| ||||| || || || || | || ||||| Sbjct 395542 GGGAATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTACCGTGATTCTT 395601 Query 119114 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 119173 |||| || | ||| || | || ||| |||||||| || || ||||| | |||| | Sbjct 395602 GCGCAGGTCAAGAAACTCGAAGACATCGGCGTGCCATGGCTCAAGGTAGATAGCGAAGGC 395661 Query 119174 CCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAG 119230 || ||| ||| |||||| || || | || ||| ||| || || || || Sbjct 395662 ACCGGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGTTGAAGACCCGCAG 395721 Query 119231 CATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCT 119288 |||||| |||| |||| || || || || || ||| || ||| | |||| Sbjct 395722 CATTGGGGTGATGCCATTAGAGGTACCGTTGGTGCCAGCGATGTATGAGCC--GGTGGCA 395779 Query 119289 CTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCC 119348 | || ||| | || || |||||| || || ||| ||| ||||| || || | Sbjct 395780 CGGATGCGGTGCACGTTCAGACCAATTCCACCCGCCATCTTGGAGATCATAGCACAAGTC 395839 Query 119349 GTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTC 119408 | || || | || || || || || ||| |||| | ||| ||||||||| Sbjct 395840 TTTAGGGTGTCATAAATGCCCTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCATGAT 395899 Query 119409 GACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATA 119468 |||| || ||| ||| || ||||| ||||| | || || | || || |||| | | Sbjct 395900 GACAGCTGGGGCTGGGGAGTGCCAGCATTGAACAATGTGGGGGAGGCATGTGTGAAGA-A 395958 Query 119469 CCT-TGGGACATCTTGTCGTAGGTCTCCAAGAC---GGCGGGAATGTCTTCCCCGTGAAT 119524 | | | |||||| || ||| ||||| | ||| || | |||| ||| | || Sbjct 395959 CTTGTTTGACATCAGGTTGTATGTCTCAATGACCCTTTCGACATCGTCTCCCCAG---AT 396015 Query 119525 ACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCT 119584 ||||| | ||| ||||| | ||||| || || || | | ||||||||||| | Sbjct 396016 ACCGACAGCGACACGCATGATCATGTGCTGTGGCCGCTCGACAACTTTACCATCGAGCTT 396075 Query 119585 CTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623 ||||||| ||||| |||||||| || ||||| Sbjct 396076 GAGGAGGTATGAACGCTCCAGGGTCTTGAAGCCGAAATA 396114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618427585516600