Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq334 260 2e-64
seq279 107 2e-18
>seq334
Length=742376
Score = 260 bits (288), Expect = 2e-64
Identities = 1143/1783 (64%), Gaps = 57/1783 (3%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|||||| ||||| ||||||| || || ||||||| || || || | || |||
Sbjct 396048 CCACAGCACATGATCATGCGTGTCGCTGTCGGTATCTGGGGAGACGATGTCGAAAGGGTC 395989
Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||||||| || |||||| | | || | |||| || || | || || | ||
Sbjct 395988 ATTGAGACATACAACCTGATGTCAAACAAGT-TCTTCACACATGCCTCCCCCACATTGTT 395930
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||||||||| || || ||||| |||| |||||||| ||| || ||||||||
Sbjct 395929 CAATGCTGGCACTCCCCAGCCCCAGCTGTCATCATGCTTCCTCGTCGACATGAAGGAGGA 395870
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
| || | || || |||| || || | | ||||| ||||| ||| ||| ||
Sbjct 395869 CAGCATTGAGGGCATTTATGACACCCTAAAGACTTGTGCTATGATCTCCAAGATGGCGGG 395810
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 104518
|| ||||| || || | || | | |||| ||| || ||| || ||
Sbjct 395809 TGGAATTGGTCTGAACGTGCACCGCATCCGTGCCACCGG--CTCATACATCGCTGGCACC 395752
Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578
|| ||| || |||| || | |||||||| || || || ||| ||| || || ||
Sbjct 395751 AACGGTACCTCTAATGGCATCACCCCAATGCTGCGGGTCTTCAACAACACCGCCCGATAC 395692
Query 104579 GTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 104632
|| | || | ||| ||||| || | |||| |||| ||||||||||||
Sbjct 395691 GTCGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTCGCTATCTACCTTGAGCCATGG 395635
Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692
||||| ||| || | ||||| ||||| |||| || || ||| | |||||| ||
Sbjct 395634 CACGCCGATGTCTTCGAGTTTCTTGACCTGCGCAAGAATCACGGTAAGGAGGAGATCCGA 395575
Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752
||| ||||| ||| || ||||||||||| ||||| ||||||||| | || ||| ||
Sbjct 395574 GCCCGTGATCTTTTCCTTGCCCTCTGGATTCCCGATCTTTTCATGAAGCGGGTCGAGAAG 395515
Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812
| || | ||| | || | || || || || ||||| ||| |||| | |||
Sbjct 395514 AACGGTGACTGGACCCTGATGTGCCCTAACGAGTGTCCTGGCCTCGCCGACTGCTACGGT 395455
Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGG 104870
||||||||||| || || ||| |||||||| | || ||||| | | | || |||
Sbjct 395454 GAGGAGTTTGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGTCGTG-GTC-GCAAGACCA 395397
Query 104871 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929
|| || | || | | ||| | || |||||| || | || || |||||||| | ||
Sbjct 395396 TG-AAGGCCCAGAAGCTATGGTATGCCATTCTCGAGGCCCAGACTGAGACTGGCAACCCC 395338
Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989
| |||||| ||||| ||| | |||| ||||| || || ||||| ||||| |||
Sbjct 395337 TTCATGCTGTACAAGGACCACGCCAACCGGAAGAGCAACCAGAAGAACCTGGGTACCATC 395278
Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049
|| |||||||| || || || ||| | || | | | | ||||||| || |||
Sbjct 395277 CGAAGCTCCAATCTTTGCACTGAGATCATTGAGTACTCTGCCCCAGATGAGGTCGCGGTG 395218
Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTTG 105107
|| ||| | || || || ||||| ||| ||||| || | ||||| || |
Sbjct 395217 TGCAACTTGGCCTCCATTGCTCTGCCCGCATATGTTGA--CTACGACAACAACTGCTACA 395160
Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167
| | | | | ||||| ||||| | ||| | ||| | |||| | ||||
Sbjct 395159 ACTTCCAGCAGTTGCACGAGGTTACCCAGGTCGTCGTCCGCAACTTGAACAAGATCATTG 395100
Query 105168 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227
|| || ||||| || || || || || ||| | ||||| || ||||
Sbjct 395099 ATGTCAACCACTACCCGGTCAAGGAGGCCTACAACAGCAACATGCGGCACCGACCTATTG 395040
Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCA-----TTTGA 105282
|| |||||||||||||||| || || | |||| ||| | | |||| || ||
Sbjct 395039 GTGTCGGTGTTCAGGGTCTTGCCGACGCATTC-----TTGGCACTGCGCATACCTTTCGA 394985
Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342
||| || || || | || || || || |||||||| || ||||| || ||
Sbjct 394984 CTCCCCAGAGGCCCGTGAGCTGAACAAGCAGATCTTCGAGACCATCTACCACGCTGCCCT 394925
Query 105343 ---TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399
|| | ||| || | || |||| || || || || | || | |||||
Sbjct 394924 CACTGCATCAAGT---GACATTGCCAAGGTGGAGGGCCCCTACAAGACATACGAGGGCAG 394868
Query 105400 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTA 105459
|| | || ||||| | || || || || |||||| | | || || | ||
Sbjct 394867 CCCCGTCTCGCAAGGCATCCTGCAGTTCGACATGTGGAATGTCAAGCCCTCCGACCTCTG 394808
Query 105460 CGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCAT 105519
|||||||| || || ||||| |||||||||| ||| |||| ||||| | | |
Sbjct 394807 GGACTGGGATGCACTGAAGGAGAAGATCAAGGAGACTGGTGTTCGCAACAGCTTGTTGCT 394748
Query 105520 GGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579
||| |||||||| || || || || | |||||| |||| || ||||| |||||||| ||
Sbjct 394747 GGCACCAATGCCCACTGCTTCGACGTCGCAAATCCTGGGCAACAATGAGTGCTTTGAGCC 394688
Query 105580 CTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC-- 105637
||||| | |||||||| | | || | ||||| || ||||| | | ||||||
Sbjct 394687 ATACACCTCCAACATCTACCAGCGACGTGTGCTCGCTGGCGAGTTCCAGGTCGTCAACCC 394628
Query 105638 -AAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCT 105696
|| ||| |||| || | |||| | || | ||||| ||| |||||| | |
Sbjct 394627 TTGGCTCCTCAGGGAT---CTGACAGAGCTCGGCTTGTGGTCTGAGGCCATGAAGAACCG 394571
Query 105697 CATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAA 105756
|| | | || |||||||||||| || ||| || || ||| || |||
Sbjct 394570 TATCATCGCCGAGGATGGTTCCATTCAGAACATTCCTAGCATCCCGGCTGATATCAAGGC 394511
Query 105757 GTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTG---ACATGGCCGCAGA 105813
| ||| || || ||||| ||| | |||| ||||| | ||||| || ||
Sbjct 394510 CCTCTACAAGACCGTCTGGGAGATCTCTCAG-AGGA--CCATTGTGCAGATGGCTGCTGA 394454
Query 105814 TCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATG-GAAAGTCCAACGA 105872
|||||| ||||||||||||| ||| | | || || |||| | || ||| | |
Sbjct 394453 CCGTGGTGCCTTCATTGATCAATCTCAGTCTCTAAACATCCACATGAGGGAG-CCATCAA 394395
Query 105873 TGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGT 105932
|| |||| || | |||||| | | | |||||| |||||||| || || ||||
Sbjct 394394 TGGGCAAGATCACCAGCATGCACTTCGCCGGCTGGAAGCTCGGTCTCAAGACTGGCATGT 394335
Query 105933 ATTACCTCCGATCTAAGGCAAAGGCGCGC-CCAATTCAGTTCA 105974
| |||||||| | ||||| || ||| || || |||||||
Sbjct 394334 ACTACCTCCGCACCCAGGCAGCTGC-CGCACCCATCCAGTTCA 394293
>seq279
Length=349471
Score = 107 bits (118), Expect = 2e-18
Identities = 153/215 (71%), Gaps = 8/215 (4%)
Strand=Plus/Minus
Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCG 94793
||| ||||| || | ||||| || || |||||| | |||||| || || ||||
Sbjct 263132 AGTCCCGTGCATCCGCAAGAAGGCCGACTGGGCTCTCAAGTGG----ATCCAGGACCGCG 263077
Query 94794 TT----CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849
||| || ||||||| | || || || || ||||| ||||||||| ||
Sbjct 263076 AGTCCACCTACGCCCAGCGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTG 263017
Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909
| | ||| | |||||| |||||||||||||| || |||||||| || || |||||
Sbjct 263016 GCGCATTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCT 262957
Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
|||||||||| || |||||||| ||||| || |||
Sbjct 262956 CCAACGAGCTCATTTCTCGTGATGAGGGTCTGCAC 262922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583253618601400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |