Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq334 260 2e-64 seq279 107 2e-18 >seq334 Length=742376 Score = 260 bits (288), Expect = 2e-64 Identities = 1143/1783 (64%), Gaps = 57/1783 (3%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| ||||||| || || ||||||| || || || | || ||| Sbjct 396048 CCACAGCACATGATCATGCGTGTCGCTGTCGGTATCTGGGGAGACGATGTCGAAAGGGTC 395989 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||||||| || |||||| | | || | |||| || || | || || | || Sbjct 395988 ATTGAGACATACAACCTGATGTCAAACAAGT-TCTTCACACATGCCTCCCCCACATTGTT 395930 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||||||||| || || ||||| |||| |||||||| ||| || |||||||| Sbjct 395929 CAATGCTGGCACTCCCCAGCCCCAGCTGTCATCATGCTTCCTCGTCGACATGAAGGAGGA 395870 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | || | || || |||| || || | | ||||| ||||| ||| ||| || Sbjct 395869 CAGCATTGAGGGCATTTATGACACCCTAAAGACTTGTGCTATGATCTCCAAGATGGCGGG 395810 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 104518 || ||||| || || | || | | |||| ||| || ||| || || Sbjct 395809 TGGAATTGGTCTGAACGTGCACCGCATCCGTGCCACCGG--CTCATACATCGCTGGCACC 395752 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 || ||| || |||| || | |||||||| || || || ||| ||| || || || Sbjct 395751 AACGGTACCTCTAATGGCATCACCCCAATGCTGCGGGTCTTCAACAACACCGCCCGATAC 395692 Query 104579 GTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 104632 || | || | ||| ||||| || | |||| |||| |||||||||||| Sbjct 395691 GTCGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTCGCTATCTACCTTGAGCCATGG 395635 Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692 ||||| ||| || | ||||| ||||| |||| || || ||| | |||||| || Sbjct 395634 CACGCCGATGTCTTCGAGTTTCTTGACCTGCGCAAGAATCACGGTAAGGAGGAGATCCGA 395575 Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 ||| ||||| ||| || ||||||||||| ||||| ||||||||| | || ||| || Sbjct 395574 GCCCGTGATCTTTTCCTTGCCCTCTGGATTCCCGATCTTTTCATGAAGCGGGTCGAGAAG 395515 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 | || | ||| | || | || || || || ||||| ||| |||| | ||| Sbjct 395514 AACGGTGACTGGACCCTGATGTGCCCTAACGAGTGTCCTGGCCTCGCCGACTGCTACGGT 395455 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGG 104870 ||||||||||| || || ||| |||||||| | || ||||| | | | || ||| Sbjct 395454 GAGGAGTTTGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGTCGTG-GTC-GCAAGACCA 395397 Query 104871 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929 || || | || | | ||| | || |||||| || | || || |||||||| | || Sbjct 395396 TG-AAGGCCCAGAAGCTATGGTATGCCATTCTCGAGGCCCAGACTGAGACTGGCAACCCC 395338 Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989 | |||||| ||||| ||| | |||| ||||| || || ||||| ||||| ||| Sbjct 395337 TTCATGCTGTACAAGGACCACGCCAACCGGAAGAGCAACCAGAAGAACCTGGGTACCATC 395278 Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049 || |||||||| || || || ||| | || | | | | ||||||| || ||| Sbjct 395277 CGAAGCTCCAATCTTTGCACTGAGATCATTGAGTACTCTGCCCCAGATGAGGTCGCGGTG 395218 Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTTG 105107 || ||| | || || || ||||| ||| ||||| || | ||||| || | Sbjct 395217 TGCAACTTGGCCTCCATTGCTCTGCCCGCATATGTTGA--CTACGACAACAACTGCTACA 395160 Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167 | | | | | ||||| ||||| | ||| | ||| | |||| | |||| Sbjct 395159 ACTTCCAGCAGTTGCACGAGGTTACCCAGGTCGTCGTCCGCAACTTGAACAAGATCATTG 395100 Query 105168 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227 || || ||||| || || || || || ||| | ||||| || |||| Sbjct 395099 ATGTCAACCACTACCCGGTCAAGGAGGCCTACAACAGCAACATGCGGCACCGACCTATTG 395040 Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCA-----TTTGA 105282 || |||||||||||||||| || || | |||| ||| | | |||| || || Sbjct 395039 GTGTCGGTGTTCAGGGTCTTGCCGACGCATTC-----TTGGCACTGCGCATACCTTTCGA 394985 Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342 ||| || || || | || || || || |||||||| || ||||| || || Sbjct 394984 CTCCCCAGAGGCCCGTGAGCTGAACAAGCAGATCTTCGAGACCATCTACCACGCTGCCCT 394925 Query 105343 ---TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399 || | ||| || | || |||| || || || || | || | ||||| Sbjct 394924 CACTGCATCAAGT---GACATTGCCAAGGTGGAGGGCCCCTACAAGACATACGAGGGCAG 394868 Query 105400 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTA 105459 || | || ||||| | || || || || |||||| | | || || | || Sbjct 394867 CCCCGTCTCGCAAGGCATCCTGCAGTTCGACATGTGGAATGTCAAGCCCTCCGACCTCTG 394808 Query 105460 CGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCAT 105519 |||||||| || || ||||| |||||||||| ||| |||| ||||| | | | Sbjct 394807 GGACTGGGATGCACTGAAGGAGAAGATCAAGGAGACTGGTGTTCGCAACAGCTTGTTGCT 394748 Query 105520 GGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579 ||| |||||||| || || || || | |||||| |||| || ||||| |||||||| || Sbjct 394747 GGCACCAATGCCCACTGCTTCGACGTCGCAAATCCTGGGCAACAATGAGTGCTTTGAGCC 394688 Query 105580 CTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC-- 105637 ||||| | |||||||| | | || | ||||| || ||||| | | |||||| Sbjct 394687 ATACACCTCCAACATCTACCAGCGACGTGTGCTCGCTGGCGAGTTCCAGGTCGTCAACCC 394628 Query 105638 -AAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCT 105696 || ||| |||| || | |||| | || | ||||| ||| |||||| | | Sbjct 394627 TTGGCTCCTCAGGGAT---CTGACAGAGCTCGGCTTGTGGTCTGAGGCCATGAAGAACCG 394571 Query 105697 CATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAA 105756 || | | || |||||||||||| || ||| || || ||| || ||| Sbjct 394570 TATCATCGCCGAGGATGGTTCCATTCAGAACATTCCTAGCATCCCGGCTGATATCAAGGC 394511 Query 105757 GTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTG---ACATGGCCGCAGA 105813 | ||| || || ||||| ||| | |||| ||||| | ||||| || || Sbjct 394510 CCTCTACAAGACCGTCTGGGAGATCTCTCAG-AGGA--CCATTGTGCAGATGGCTGCTGA 394454 Query 105814 TCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATG-GAAAGTCCAACGA 105872 |||||| ||||||||||||| ||| | | || || |||| | || ||| | | Sbjct 394453 CCGTGGTGCCTTCATTGATCAATCTCAGTCTCTAAACATCCACATGAGGGAG-CCATCAA 394395 Query 105873 TGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGT 105932 || |||| || | |||||| | | | |||||| |||||||| || || |||| Sbjct 394394 TGGGCAAGATCACCAGCATGCACTTCGCCGGCTGGAAGCTCGGTCTCAAGACTGGCATGT 394335 Query 105933 ATTACCTCCGATCTAAGGCAAAGGCGCGC-CCAATTCAGTTCA 105974 | |||||||| | ||||| || ||| || || ||||||| Sbjct 394334 ACTACCTCCGCACCCAGGCAGCTGC-CGCACCCATCCAGTTCA 394293 >seq279 Length=349471 Score = 107 bits (118), Expect = 2e-18 Identities = 153/215 (71%), Gaps = 8/215 (4%) Strand=Plus/Minus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCG 94793 ||| ||||| || | ||||| || || |||||| | |||||| || || |||| Sbjct 263132 AGTCCCGTGCATCCGCAAGAAGGCCGACTGGGCTCTCAAGTGG----ATCCAGGACCGCG 263077 Query 94794 TT----CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 ||| || ||||||| | || || || || ||||| ||||||||| || Sbjct 263076 AGTCCACCTACGCCCAGCGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGTG 263017 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 | | ||| | |||||| |||||||||||||| || |||||||| || || ||||| Sbjct 263016 GCGCATTCGCCTCTATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCT 262957 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||||||||| || |||||||| ||||| || ||| Sbjct 262956 CCAACGAGCTCATTTCTCGTGATGAGGGTCTGCAC 262922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583253618601400