Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq512 107 2e-18 >seq512 Length=287951 Score = 107 bits (118), Expect = 2e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 |||||||||| || || || || || || |||||| | || || ||||| || || | | Sbjct 18639 CCATGCAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACCCTTGAGGTCGAGTCCT 18580 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 |||| | || || | ||||| || || || ||||| || ||||| || || || | Sbjct 18579 CCGATACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACC 18520 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 | ||||| | || | |||||||| || | || ||| | ||| | ||||| |||| Sbjct 18519 AGCAGCGCCTTATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACA 18460 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||||||| ||| | ||| | || | ||| | || || || || Sbjct 18459 ACATTCAAAAGGAGTCTACCCTCCATCTCGTCCTCCGTCTTCGTGGCGGTAT 18408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434913045067200