Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq556 152 5e-32 >seq556 Length=684303 Score = 152 bits (168), Expect = 5e-32 Identities = 266/380 (70%), Gaps = 8/380 (2%) Strand=Plus/Plus Query 6747 TGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGA 6806 ||||||| || || ||||||||| || || |||||||||||||| ||| | || Sbjct 379797 TGTGGCAAGGCGGCAGCGCCATCTTCTTCAGGTCGGCCGGGTTCCACGCGCTCATGATGA 379856 Query 6807 TCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTC 6866 | | | ||| | ||||| |||| | ||| |||||| | ||||||||| | | Sbjct 379857 TGCGCCGGTCGTACGGGTTGTGCTTGAGCTTGTGGATCACCTCGGCCAGCTGGTCGACGC 379916 Query 6867 CCTGTCCCGAATAGTCCGCTT-CGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGG 6925 |||| |||| ||||| |||| ||| | || ||||| ||||| || || | ||||||| Sbjct 379917 CCTGGCCCGTGTAGTCGGCTTTCGCGTCGACG-TACTCGGCCCCGAAATGCCGCCACTGG 379975 Query 6926 AACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGG--GAACCCC-CGCTTGTCC 6982 |||||||| || ||||||| ||||||| ||| || | ||| | |||| ||| |||| Sbjct 379976 AACCCGTACACTGGGCCCAGGTCGCCCGCCT--CGCGGTGGCCCAGCCCCACGC-TGTCG 380032 Query 6983 AGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAGCTCCTTG 7042 || | || |||||||||| ||||||||||||| || ||| | ||||| | Sbjct 380033 AGGTACTCGCGAGACCCGTTGCCGTCCCAGATCTTGACGCCCTGTTCTGAGAGGGACAGC 380092 Query 7043 GTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTTCCAGTACACA 7102 | ||| | ||| | |||||| |||||||| ||| ||| ||||| | | || Sbjct 380093 GACGACGTCTCGCCCGCGATGAACCATAGCAGCTCTGCGAGGACGGCCTTCTGGAAGACG 380152 Query 7103 CGTTTCGTCGTCAGCAGCGG 7122 || || || ||||| ||||| Sbjct 380153 CGCTTTGTGGTCAGGAGCGG 380172 Score = 152 bits (168), Expect = 5e-32 Identities = 266/380 (70%), Gaps = 8/380 (2%) Strand=Plus/Minus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 ||||| ||||| || || || || | | ||||| ||| ||| |||||||| |||||| Sbjct 380172 CCGCTCCTGACCACAAAGCGCGTCTTCCAGAAGGCCGTCCTCGCAGAGCTGCTATGGTTC 380113 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCT 34342 | ||| | ||| | | ||||| | ||| || ||||||||||||| Sbjct 380112 ATCGCGGGCGAGACGTCGTCGCTGTCCCTCTCAGAACAGGGCGTCAAGATCTGGGACGGC 380053 Query 34343 CACGGGTCTCGAGACTTTCTGGACAAGCG-GGGGTTC--CCATCTCGGGAGGAGGGCGAC 34399 |||||||||| || | || |||| ||| |||| | ||| | || ||| ||||||| Sbjct 380052 AACGGGTCTCGCGAGTACCTCGACA-GCGTGGGGCTGGGCCACCGCG--AGGCGGGCGAC 379996 Query 34400 TTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCG-A 34458 ||||||| || ||||||||||||||| | || || ||||| ||||| || | ||| | Sbjct 379995 CTGGGCCCAGTGTACGGGTTCCAGTGGCGGCATTTCGGGGCCGAGTA-CGTCGACGCGAA 379937 Query 34459 AGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCG 34518 ||| ||||| |||| ||||| | ||||||||| | |||||| ||| | |||| Sbjct 379936 AGCCGACTACACGGGCCAGGGCGTCGACCAGCTGGCCGAGGTGATCCACAAGCTCAAGCA 379877 Query 34519 GAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGAT 34578 ||||| | ||| | | ||| | ||| |||||||||||||| || || ||| Sbjct 379876 CAACCCGTACGACCGGCGCATCATCATGAGCGCGTGGAACCCGGCCGACCTGAAGAAGAT 379817 Query 34579 GGCGCTCCCCCCGTGCCACA 34598 |||||| || || ||||||| Sbjct 379816 GGCGCTGCCGCCTTGCCACA 379797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448256880769200