Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq512 93.3 4e-14
seq1 89.7 4e-13
>seq512
Length=287951
Score = 93.3 bits (102), Expect = 4e-14
Identities = 138/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152
||| ||||| || || || |||| || || || |||| || ||||| ||||| |||||
Sbjct 18446 CTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAA 18505
Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212
||||| ||||||||||| | ||| | || ||| |||||| ||| || |||| |||
Sbjct 18506 GATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 18564
Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271
| | | |||||| ||||| || || | ||||| | || || || || || || |
Sbjct 18565 TGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTCA 18624
Query 39272 CAAAGATTTGCAT 39284
| ||||| |||||
Sbjct 18625 CGAAGATCTGCAT 18637
>seq1
Length=1124325
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
|||| || || ||| ||| || || || || || |||| || || || |||| ||
Sbjct 67676 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 67617
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| ||||| || || || |||||||||||||| | ||| | || || |||||| |
Sbjct 67616 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 67557
Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255
|| || |||| | | | || ||| |||||||| || | |||||| | ||
Sbjct 67556 ATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTG 67497
Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
||||| || || || || ||||| |||||
Sbjct 67496 CCCGTGAGGGTCTTCACGAAGATCTGCAT 67468
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429540443439305
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |