Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11] 985 sequences; 64,714,568 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq512 136 9e-27 seq1 134 3e-26 seq24 91.5 3e-13 >seq512 Length=287951 Score = 136 bits (150), Expect = 9e-27 Identities = 164/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || ||||||||||| || || ||||||||||| |||| | |||| Sbjct 18191 GAGGCGGAGAACCAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCG 18250 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 |||||| || || ||||| || || ||||| || | ||||||||| | | ||| || Sbjct 18251 CCCATCCTCGAGCTGCTTT--CCAGCAAAGATCAGACGCTGCTGGTCAGGGGGGATGCCC 18308 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || || || || |||||| | || | | ||||||| ||| || || || Sbjct 18309 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCTGAGGACTCGACCTCGAGG 18368 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || ||||| || |||||||| ||||||| |||||| Sbjct 18369 GTAATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 18409 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| ||||| || |||||||| ||||| |||||||| |||| | || | || || Sbjct 18425 GAGGACGAGATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTC 18484 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||| |||||||| | ||||||||| | | ||| || ||||| || Sbjct 18485 CTCGAGCTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 18544 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| | || | | | || || ||| || ||||| || || || Sbjct 18545 CTGGATCTTGGACTTGACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGT 18604 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||||||||||| |||||| Sbjct 18605 CTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 18637 Score = 86.0 bits (94), Expect = 1e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || || || || || ||||||||||| || | || || | |||||| Sbjct 17970 AGCACCAGGTGCAGCGTCGATTCCTTCTGGATGTTGTAGTCAGATAGCGTCCGGCCATCT 18029 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || ||||| || || | |||||||| | | ||||| ||||| || Sbjct 18030 TCCAACTGCTTGCCAGCGAAAATGAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTCC 18089 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || ||||| | || | |||| || ||| || ||||| || || || Sbjct 18090 TGAATCTTAGACTTGACGTTGTCAATCGTGTCCGATGACTCGACCTCAAGCGTGATCGTC 18149 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| | ||||| ||||| | |||||| Sbjct 18150 TTGCCCGTCAAGGTCTTGACGAAAATCTGCAT 18181 >seq1 Length=1124325 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || ||||| || ||||||||||| |||| | || | || || Sbjct 67679 AGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 67620 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||| | | || |||||||| || Sbjct 67619 TCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 67560 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || |||||| | || | | |||| ||| ||| || ||||| || ||||| Sbjct 67559 TGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTC 67500 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||||||||||| |||||| Sbjct 67499 TTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 67468 >seq24 Length=629884 Score = 91.5 bits (100), Expect = 3e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || ||||||||||| |||| | || | ||||| || || || ||||||||||| Sbjct 219418 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 219359 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 | | ||||||||| | | || || ||||| || || || || ||||| | || Sbjct 219358 AATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 219299 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 | | |||| || ||| || ||||| || ||||| |||||||| || |||||||||||| Sbjct 219298 ATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAG 219239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153806238420935