Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20longicolla_20[genbank_20GCA_5F000800745.1_202014-12-11]
985 sequences; 64,714,568 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq512 152 1e-31
seq1 150 4e-31
seq24 138 3e-27
>seq512
Length=287951
Score = 152 bits (168), Expect = 1e-31
Identities = 158/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||||| || || || || || ||||||||||| || |||||||
Sbjct 18406 CAGATCTTCGTCAAGACTCTGACTGGCAAGACCATTACCCTCGAGGTCGAGTCCTCAGAC 18347
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| |||||||| || || ||||| || ||||||||
Sbjct 18346 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAG 18287
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || ||||| |||||||| ||||| | || || |||| || ||| ||
Sbjct 18286 CGTCTGATCTTTGCTGGAAAGCAGCTCGAGGATGGGCGAACCCTCTCCGACTACAACATC 18227
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || ||||| || || || || |||
Sbjct 18226 CAGAAGGAATCTACTCTTCACCTGGTT 18200
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || | || || || |||||||| || ||||| || || |||
Sbjct 18178 CAGATTTTCGTCAAGACCTTGACGGGCAAGACGATCACGCTTGAGGTCGAGTCATCGGAC 18119
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || |||||||| |||||||||||||| || ||||| || || |||||||||
Sbjct 18118 ACGATTGACAACGTCAAGTCTAAGATTCAGGACAAGGAGGGAATTCCACCAGACCAGCAA 18059
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || ||||| || || ||| | |||||||| |||| || | || || ||| ||
Sbjct 18058 CGTCTCATTTTCGCTGGCAAGCAGTTGGAAGATGGCCGGACGCTATCTGACTACAACATC 17999
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || ||||| || ||||| || ||
Sbjct 17998 CAGAAGGAATCGACGCTGCACCTGGT 17973
>seq1
Length=1124325
Score = 150 bits (166), Expect = 4e-31
Identities = 157/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || ||||| || || || |||||||| |||||||| || |||
Sbjct 67471 CAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCCGAC 67530
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| |||||||| ||||| || || || ||||||||
Sbjct 67531 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAGCAG 67590
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || |||||||| || || | || || |||| || ||| ||
Sbjct 67591 CGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATC 67650
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || ||||| || ||
Sbjct 67651 CAGAAGGAGTCCACCCTGCACCTGGT 67676
>seq24
Length=629884
Score = 138 bits (152), Expect = 3e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
|||||||| || || || || || || |||||||| |||||||| ||| |||||||||
Sbjct 219240 TTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCCTCTGACACCATC 219299
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| |||||||| ||||| |||||||| || || || || || |||||||| ||| |
Sbjct 219300 GACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGATTG 219359
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||||||||| || ||||| || ||||| | || || |||| || ||| |||| ||
Sbjct 219360 ATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAA 219418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203716008536090
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |