Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq2 82.4 8e-11
>seq2
Length=5746313
Score = 82.4 bits (90), Expect = 8e-11
Identities = 113/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561
|| |||||||||||||| || ||||| || || ||||||||||| ||||| | ||
Sbjct 3731049 TCGGAGTGTATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGCGCCTCAGGAATC 3730990
Query 16562 TGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621
|| || || || ||||| || ||| |||||| || ||||| ||||| || |||
Sbjct 3730989 TGGACCTCGCCGCTGAATCGCTCGACCAAGTTCTCGTTGACGATGCCGTCTGACGCGGCA 3730930
Query 16622 AAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTC 16659
|| || || | ||||| ||||| ||||| || ||
Sbjct 3730929 AAGAAGGCAAGGATGTGGGAGATGAAGTATTTCTCATC 3730892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414201826920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |