Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01] 31 sequences; 41,729,728 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2 82.4 8e-11 >seq2 Length=5746313 Score = 82.4 bits (90), Expect = 8e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561 || |||||||||||||| || ||||| || || ||||||||||| ||||| | || Sbjct 3731049 TCGGAGTGTATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGCGCCTCAGGAATC 3730990 Query 16562 TGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621 || || || || ||||| || ||| |||||| || ||||| ||||| || ||| Sbjct 3730989 TGGACCTCGCCGCTGAATCGCTCGACCAAGTTCTCGTTGACGATGCCGTCTGACGCGGCA 3730930 Query 16622 AAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTC 16659 || || || | ||||| ||||| ||||| || || Sbjct 3730929 AAGAAGGCAAGGATGTGGGAGATGAAGTATTTCTCATC 3730892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414201826920