Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01] 31 sequences; 41,729,728 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1 280 2e-70 >seq1 Length=5759619 Score = 280 bits (310), Expect = 2e-70 Identities = 531/784 (68%), Gaps = 57/784 (7%) Strand=Plus/Minus Query 145537 TAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCC 145596 || |||| ||||| ||| || || | | ||| |||| || ||| | | | || ||| Sbjct 2010674 TATACCGACATCTTCATCGGAATCGTCTTGTGCGGGTTATAATCCTTGACCACGAACTCC 2010615 Query 145597 TCCGCCCTGAAGTCATCTATG-TCCT--CCACCCGCCTCAGGATCCTGAGCCTGGGAAAG 145653 || ||| | | | || ||| ||| || || || | |||| |||| || || Sbjct 2010614 TCGGCCTTCCACCCGTCGATGCTCCCGCCCTCCTCCCGCGCGATCTCCAGCCCCGGGAAC 2010555 Query 145654 GGCCGGGGGCTCCTG-GTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTG 145712 ||||| || |||| | | |||||| | | ||| | ||| ||||||| ||| ||||| Sbjct 2010554 GGCCGCGG-CTCCCGCGCCAGCTGCACCCGCAGCGCCTCGACGTGGTCCGCGTACACGTG 2010496 Query 145713 CGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCAT 145772 |||||| |||| |||||| | | | ||| ||| | || ||| ||| || ||||| Sbjct 2010495 CGCGTCGCCCATGACGTGCGTCAGGCTCCCCGGCACCAGCTCCGCCGCGTGCGCCACCAT 2010436 Query 145773 GTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGA 145832 || |||||||| | |||||| || |||||||| |||||||||||||||||||| | Sbjct 2010435 GTGCGTCAGCAGCGCGTAGCTCGCGATGTTGAACGGCACCCCCAGCCCCATGTCGCAGCT 2010376 Query 145833 GCGCTGGTACAGCTGGCAGGAGAGCT-------------------------------CCC 145861 ||||||||||||||||||| || | ||| Sbjct 2010375 GCGCTGGTACAGCTGGCAGTGCAGGTGGCCCTTCTGCTTGGTCGTCGTCGTCGCCGCCCC 2010316 Query 145862 CG---------CCCGC--------CACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAG 145904 || ||||| |||||||||||| | | |||||| |||||||| Sbjct 2010315 CGTCGCCGCTCCCCGCGGGTACGACACGTAGAACTGCGCGAACATGTGGCACGGCGGCAG 2010256 Query 145905 GGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGG 145964 ||||| | |||||||||||||||||| ||| | || |||| | || | | || Sbjct 2010255 CGCCATCTTGCCCAGGTCCGCCGGGTTCCACGCGCTCAGCACGATGCGCCGGTCGTACGG 2010196 Query 145965 GTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATC 146024 | || || | || | || || |||||||| |||||||| ||| ||| || Sbjct 2010195 GCTCGTCCGCAGCTTGTGCACCACCTCGGCCAGCTGGTCGACGCCCTGGCCCGCGTAGTC 2010136 Query 146025 TGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCC 146084 ||| | |||||||||||| ||||||||||||| ||||||||||||||| || || || Sbjct 2010135 GGTCGCCGCGTCCACGTACGCCGCCCCGAAGTGCCGCCACTGGAACCCGTACACCGGGCC 2010076 Query 146085 CAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTT 146144 ||||||||| | ||| ||| |||||||| | | | | ||||| || || |||||||| Sbjct 2010075 CAGGTCCCCCACCGCCCGGTGGCCCAGCCCCACGCTGTCCAGGAACTCGCGCGACCCGTT 2010016 Query 146145 GGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTG 146202 | |||||||||||||||| || |||||| ||| || || || |||| ||| Sbjct 2010015 GCCGTCCCAGATCTTGACCCCGGCCTCGCTGAGCGC-CA-GCGACGACGTGTTGCCCGCC 2009958 Query 146203 ATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGG 146262 | |||||| |||||||| | | ||| ||| | ||| |||| ||||||||||||||| Sbjct 2009957 ACGAACCACAGCAGCTCCGCCACCACCGCCCGCAGGAACACCCGCTTGGTGGTCAGCAGC 2009898 Query 146263 GGGA 146266 |||| Sbjct 2009897 GGGA 2009894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076571345240