Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq4 102 6e-17
>seq4
Length=3212107
Score = 102 bits (112), Expect = 6e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| ||||||||||||||| || ||||||||||||||| || || | |||
Sbjct 2383866 AGAACCAGGTGAAGTGTTGATTCCTTCTGAATGTTGTAGTCGCTCAAGGTACGGCCATCC 2383807
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT-C 18232
||||| || ||||| ||| ||||||| | ||||||||| ||| | |||||||| | |
Sbjct 2383806 TCCAACTGCTTGCCAGCAAAGATAAGACGCTGTTGATCCGGGGGAATACCTTCCTTGTCC 2383747
Query 18233 GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292
| | ||| | |||||| | ||| ||| || | ||| || | |||||| |
Sbjct 2383746 TGGATCTTGCT-CTTGACGTTGTCAATAGTATCCGACGACTCAACCTCGAGGGTGATCGT 2383688
Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| || |||||||| || || || || |||||
Sbjct 2383687 CTTTCCCGTCAATGTCTTGACGAAGATCTGCAT 2383655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343856679095
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |