Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq2 93.3 8e-14
>seq2
Length=5746313
Score = 93.3 bits (102), Expect = 8e-14
Identities = 177/258 (69%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| || || || |||||||||| || || ||| || || |||||||||||
Sbjct 596368 CCGATACCACCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGGGTGTCATAAATACCA 596309
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG-GGGTGTGACTGT 94904
|||||||| ||||| | | | | | ||||||||| || || || || | || | | ||
Sbjct 596308 TCAATGCTGTCATCCTTCATGTCGACAAGGAAGCAAGATGACAGCTGAGCCTGGGGC-GT 596250
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
||| || ||||| || || || || || || || || | || |||||||| | ||
Sbjct 596249 ACCAGCGTTGAACAGAGTAGGAGAGGCGTGTGTGAAGTACTTGCTGGACATGAGGTTGTA 596190
Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024
|| ||||| || | |||||| ||| || || ||||| |||||||| |||||
Sbjct 596189 AGTCTCAATAACCCTCTCGATGTCGTCTCCCCAGATACCAACAGCAACACGCATGATCAT 596130
Query 95025 GTCCTGAGGGCGCTCAAC 95042
| ||| || | ||| ||
Sbjct 596129 ATGCTGTGGTCTCTCCAC 596112
Score = 87.8 bits (96), Expect = 4e-12
Identities = 119/165 (72%), Gaps = 6/165 (4%)
Strand=Plus/Minus
Query 94392 ACCTTTGCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTC 94451
|||| ||| || ||||| || |||||||| | |||| ||||| ||||| | || ||
Sbjct 596762 ACCTCGGCCCTCGGCCTCGTACTTCTCGTAGAGGGCCTCGAACTCATCGCCGTAAACATC 596703
Query 94452 GGAAAGGCCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---AC 94508
|| |||||||||||||| | ||||||||| || | ||| || || |||| ||
Sbjct 596702 GGCCAGGCCAGGGCACTCATTGGGGCACATAAGCGTCCA---CTCTCCGTTCTTCTCAAC 596646
Query 94509 TCTCTCCATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATC 94553
| | |||||||||||| | | ||||| || ||||||||||
Sbjct 596645 ACGTTTCATGAAGAGATCGGGAATCCAGAGGGCAAGGAAAAGATC 596601
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583606949605
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |