Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq2 224 1e-53
>seq2
Length=5746313
Score = 224 bits (248), Expect = 1e-53
Identities = 638/971 (66%), Gaps = 16/971 (2%)
Strand=Plus/Minus
Query 62948 AGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 63007
||| |||| ||| || ||||| ||||||| || ||| |||| || ||||| |||||
Sbjct 596966 AGAGGCCAAATTGCAGACGGCGACCTCATCAGGTGCCGAGTATTCAATGATCTCGGTGCA 596907
Query 63008 AAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTA-CACGCAT 63066
|||||| | ||| || || | || | ||| |||||||| ||| || | |
Sbjct 596906 GAGATTAGAGCTGCGGATGGTGCCCAGGTTCTTTTGGTTACTCTTGCGGTTGGCATGG-T 596848
Query 63067 CCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA 63126
|||| || || ||||| || ||||||| || |||| | || | ||| || | |||||
Sbjct 596847 CCTTGTAGAGCATGAAAGGGTTACCAGTCTCGGTCTGGGCCTCCAGAATAGCATACCAGA 596788
Query 63127 CGACTC-GAGCCTTTATTATAGATTTGT--ATCTCCTTTCTCTT--TCGTA--TAGAGTA 63179
| || | ||||| || | |||| | ||| ||| ||||| | |||
Sbjct 596787 -GCTTCTGGGCCTTGATCTT----TTGTCGACCTCGGCCCTCGGCCTCGTACTTCTCGTA 596733
Query 63180 TACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACAC 63239
| | |||||||| || || |||||| | ||| | ||| || |||| || |||
Sbjct 596732 GAGGGCC--TCGAACTCATCGCCGTAAACATCGGCCAGGCCAGGGCACTCATTGGGGCAC 596675
Query 63240 ATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 63299
|| | || ||||||||||| | || || |||||||| |||||||| |||||||| ||
Sbjct 596674 ATAAGCGTCCACTCTCCGTTCTTCTCAACACGTTTCATGAAGAGATCGGGAATCCAGAGG 596615
Query 63300 GCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 63359
|| | || ||||| | | | || || || || |||||| ||||| |||
Sbjct 596614 GCAAGGAAAAGATCGCGAGCGCGGACCTCTTCTTTACCATGGTTCTTTCGGAGATCCAGG 596555
Query 63360 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTG 63419
||| | | | ||| || ||||| || || | || || || | | ||||| || |||
Sbjct 596554 AACTCAAAGACATCGGAGTGCCAGGGCTCGAGATAGATAGCAAAGGCACCAGGTCGCTTG 596495
Query 63420 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 63479
|| || || || || | ||||| ||| ||||| || | || | | ||| |||| ||||
Sbjct 596494 TTGCCACCTTGGTCGACGTATCGAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATA 596435
Query 63480 CCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATT 63539
|| || ||| |||| |||||||||| |||||| || | ||||||||| ||
Sbjct 596434 CCATTGGATGTACCGTTGGTACCGGCGATATAAGAGCCGGTCGCACGAATACGGTGGATG 596375
Query 63540 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAG 63599
||||| || || || ||||| || ||||| | ||||| || | ||||||||
Sbjct 596374 TTGAGACCGATACCACCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGGGTGTCATAA 596315
Query 63600 ATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 63659
|| || || ||||| ||||| |||||| | || || || |||| || |
Sbjct 596314 ATACCATCAATGCTGTCATCCTTCATGTCGACAAGGAAGCAAGATGACAGCTGAGCCTGG 596255
Query 63660 GTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 63719
| || || || || || | |||||||| ||||| || || | || || | ||
Sbjct 596254 GGCGTACCAGCGTTGAACAGAGTAGGAGAGGCGTGTGTGAAGTACTTGCTGGACATGAGG 596195
Query 63720 TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 63779
||||| ||||||||| | || || || | || || || || ||||||||
Sbjct 596194 TTGTAAGTCTCAATAACCCTCTCGATGTCGTCTCCCCAGATACCAACAGCAACACGCATG 596135
Query 63780 AACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63839
| ||| ||||| ||||| || ||||| ||| || | |||| | || ||| |||
Sbjct 596134 ATCATATGCTGTGGTCTCTCCACAATCTTGCCATTAAGCTTCAGGAGATATGATCGCTCC 596075
Query 63840 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTG 63899
||||| || || || || || | ||| ||||| || ||||| | ||| | || | |
Sbjct 596074 AAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCACGGTCGTAGACAATGGCGGAGTCG 596015
Query 63900 AGCTTATCCTT 63910
|| | |||||
Sbjct 596014 AGGTCCTCCTT 596004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817355945680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |