Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01] 31 sequences; 41,729,728 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2 107 1e-18 >seq2 Length=5746313 Score = 107 bits (118), Expect = 1e-18 Identities = 283/432 (66%), Gaps = 0/432 (0%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 ||||| || ||||| || || || | || || | || || |||| |||||||| Sbjct 3731257 GCCTTCGCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTC 3731316 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 ||||| ||| || ||||| || || | || |||||||||||||| |||||||| Sbjct 3731317 AAGAAGCGTGGTCTGATGCCTGGCCTGACCTTCTCCAACGAGTTGATCTCGCGTGACGAG 3731376 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTCAG 22929 || |||||| |||||||||||| ||||||| || || || || | || Sbjct 3731377 GGCCTACACACTGACTTTGCTTGCCTGCTGTTCTCCCACCTGAAGAATCGCCCCAGCAAG 3731436 Query 22930 GACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAAGAG 22989 || | | || | ||||| ||||||| || | |||||| | ||||| |||| Sbjct 3731437 GAGAAGGTCCAGAAGATCATCACTGATGCTGTCGCTATTGAGCAAGAGTTCTTGACAGAG 3731496 Query 22990 GCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATACAGTTT 23049 || || |||| || || ||||| || |||| | ||||| ||||| Sbjct 3731497 GCCCTCCCTTGCGCCCTGCTGGGAATGAACTCCAACCTCATGAAGCAATACATTGAGTTT 3731556 Query 23050 GTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAATCCA 23109 ||||| || || || ||| ||| || || | | ||| |||| || |||| || Sbjct 3731557 GTTGCGGACCGTCTCCTCCTTGCTCTCGGCAACGAGAAGGTGTACCGCGCCACCAACCCC 3731616 Query 23110 TTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGAACGCCGTGTG 23169 || || |||||||| ||||| | | ||| || || ||||||||||| || ||| Sbjct 3731617 TTCGACTTCATGGAGAACATCTCTCTGGGAGGCAAGACCAACTTCTTTGAGAAGCGCGTG 3731676 Query 23170 AGTGAATATCAG 23181 | ||||| ||| Sbjct 3731677 GGCGAATACCAG 3731688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233465410493