Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 1e-18
>seq2
Length=5746313
Score = 107 bits (118), Expect = 1e-18
Identities = 283/432 (66%), Gaps = 0/432 (0%)
Strand=Plus/Plus
Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809
||||| || ||||| || || || | || || | || || |||| ||||||||
Sbjct 3731257 GCCTTCGCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTC 3731316
Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869
||||| ||| || ||||| || || | || |||||||||||||| ||||||||
Sbjct 3731317 AAGAAGCGTGGTCTGATGCCTGGCCTGACCTTCTCCAACGAGTTGATCTCGCGTGACGAG 3731376
Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTCAG 22929
|| |||||| |||||||||||| ||||||| || || || || | ||
Sbjct 3731377 GGCCTACACACTGACTTTGCTTGCCTGCTGTTCTCCCACCTGAAGAATCGCCCCAGCAAG 3731436
Query 22930 GACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAAGAG 22989
|| | | || | ||||| ||||||| || | |||||| | ||||| ||||
Sbjct 3731437 GAGAAGGTCCAGAAGATCATCACTGATGCTGTCGCTATTGAGCAAGAGTTCTTGACAGAG 3731496
Query 22990 GCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATACAGTTT 23049
|| || |||| || || ||||| || |||| | ||||| |||||
Sbjct 3731497 GCCCTCCCTTGCGCCCTGCTGGGAATGAACTCCAACCTCATGAAGCAATACATTGAGTTT 3731556
Query 23050 GTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAATCCA 23109
||||| || || || ||| ||| || || | | ||| |||| || |||| ||
Sbjct 3731557 GTTGCGGACCGTCTCCTCCTTGCTCTCGGCAACGAGAAGGTGTACCGCGCCACCAACCCC 3731616
Query 23110 TTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGAACGCCGTGTG 23169
|| || |||||||| ||||| | | ||| || || ||||||||||| || |||
Sbjct 3731617 TTCGACTTCATGGAGAACATCTCTCTGGGAGGCAAGACCAACTTCTTTGAGAAGCGCGTG 3731676
Query 23170 AGTGAATATCAG 23181
| ||||| |||
Sbjct 3731677 GGCGAATACCAG 3731688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356233465410493
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |