Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01] 31 sequences; 41,729,728 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2 251 1e-61 >seq2 Length=5746313 Score = 251 bits (278), Expect = 1e-61 Identities = 1318/2068 (64%), Gaps = 47/2068 (2%) Strand=Plus/Minus Query 78748 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTC 78807 || || || |||||||| ||||| || || || || |||| || ||| ||||| ||| Sbjct 597847 GTGCGGAGGTAGTACATGCCCGTCTTCAGGCCTAGCTTCCAGCCCGTGAAGTGCATGCTC 597788 Query 78808 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 78867 || | ||| | || || || ||||| |||| ||| || ||| |||||| Sbjct 597787 GTGATCTTGCCCATGGTGGGGTCCCGCATGTGGATGTTCAAAGACTGGGATTGGTCGATG 597728 Query 78868 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 78927 ||||| || | ||| |||||||| | | | || || | || ||||| | || Sbjct 597727 AAGGCACCACGGTCGGCAGCCATCTGCACAACGGTTCGCTGAGAGATCTCCCACACGGTC 597668 Query 78928 TTATAAACTCGCTTAATATCTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCT 78984 || || | ||| || || | |||| ||| | | ||||| ||||| ||||| || Sbjct 597667 TTGTACAGGGCCTTGATCTCCGCCGGAATGTTGGGAATGTTCTGGATGGAACCACCCTCA 597608 Query 78985 GCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGG 79044 || || || | |||||| || | || ||| | | ||| | | | || Sbjct 597607 GCAATGATACGATTCTTCATGTTGTCGGACCACAGACCCATGTCGACGAGGTCCTTCAGC 597548 Query 79045 AGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 79104 || || || || || || || || |||| | || | |||| ||| || || Sbjct 597547 AGCCAGGGGTTGACCACCTGGAACTCGCCAGCTAGGACACGACGAGAGTAGATGTTGGAT 597488 Query 79105 GTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATA 79164 ||||| || || | | || || || |||| || |||| || || || |||||| Sbjct 597487 GTATAGGGCTCGAAACACTCGTTGTTGCCCAGGATCTGAGATGTACTGGCAGTGGGCATA 597428 Query 79165 GGTGCCACCAATAAACTATTTCTAAGACCGTA-TGATCTGATTTTATCTTTTAGAGATTC 79223 || |||| ||| | ||| || | | ||| | || | |||| | ||||| || || Sbjct 597427 GGAGCCATCAACAGACTGTTGCGGACACCATTCTGCT-TGATCTGCTCTTTGAGGCTCTC 597369 Query 79224 CCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACT 79283 ||| |||||||| ||||| ||| || ||||| | || |||||||| ||||| | Sbjct 597368 CCAGTCCCAAAGGTCAGATGGGGTGACGTTCCACATGTCGTATTGTAGGATACCCTGGGA 597309 Query 79284 AGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGC 79343 | ||| || ||| || || ||||||| || | ||| | || || Sbjct 597308 GACAGGTGAGCCCTCGTAGGTGGAGTAGGGTCCTTGCTCCTTGGCGATCTC-CATGGAAG 597250 Query 79344 CTCT-AATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTA 79402 || | || || || | |||||||| ||||| |||| ||| ||||| | || || Sbjct 597249 CTGTCAAGGCACCATGGTAAATGGTCTCGAAGATCTGCTTGTTGAGCTGCCTAGCCTCGG 597190 Query 79403 GGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATAC 79462 | || || || | | | ||| || || || | ||||| ||||| | | Sbjct 597189 GAGACTCGAAAGGCATGCGGAGGGCTAGAAAAGCATCAGCAAGACCTTGGACACCGAGGC 597130 Query 79463 CGATAGGTCTATGTCTCTTATTAGAAATTTCA-GCTTCTGGAATAGGATAATAATTAATA 79521 |||| || | |||| | | || | || | || ||| ||| ||| || || || | | Sbjct 597129 CGATGGGACGGTGTCGCATGTT-GCTGTTGCGCGCCTCTTGAACAGGGTAGTAGTTGACA 597071 Query 79522 TCTATAATTTTATTGAGATTCCTGACTATTACTTTGACC-ACATCCTTTAGTTTGAGAAA 79580 || || || || || || || | || | | | || || || | || || |||| Sbjct 597070 TCAATGATCTTGTTCAGGTTGCGCACAAC-AGTCTGCGTGACGTCGTGCAGCTTCTGAAA 597012 Query 79581 ATCAAAT-CGTCCA---TCTATT--ACAAACATGTTCAACGCGACAGATGCCAGATTACA 79634 ||| | || || | || | || ||| | || || | ||| |||| ||| || Sbjct 597011 GTCATAGACGCCCTGGTTGTAGTCGACGAACGAGGGCAGAGCCAGAGAGGCCAAATTGCA 596952 Query 79635 AACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTT 79694 ||||| ||||||| || ||| |||| || || || |||||||| ||| | Sbjct 596951 GACGGCGACCTCATCAGGTGCCGAGTATTCAATGATCTCGGTGCAGAGATTAGAGCTGCG 596892 Query 79695 AATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTA-CACGCATCCTTATAAAGAATGA 79753 ||||| || | || | ||| |||||||| ||| || | ||||| || || |||| Sbjct 596891 GATGGTGCCCAGGTTCTTTTGGTTACTCTTGCGGTTGGCATGG-TCCTTGTAGAGCATGA 596833 Query 79754 ACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTT 79812 | || ||||||| || |||| | || | ||| || | ||||| | || | ||||| Sbjct 596832 AAGGGTTACCAGTCTCGGTCTGGGCCTCCAGAATAGCATACCAGA-GCTTCTGGGCCTTG 596774 Query 79813 ATTATAGACTTGT--ATCTCTTTTCTCTT--TCGTA-TTGT-GTATATAATCGTTCGAAC 79866 || | |||| | ||| ||| ||||| || | ||| | | |||||| Sbjct 596773 ATCTT----TTGTCGACCTCGGCCCTCGGCCTCGTACTTCTCGTAGAGGGCC--TCGAAC 596720 Query 79867 TCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCT 79926 || || || |||||||| | | ||||| || || | || ||||| | || ||||||| Sbjct 596719 TCATCGCCGTAAACATCGGCCAGGCCAGGGCACTCATTGGGGCACATAAGCGTCCACTCT 596660 Query 79927 CCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCT 79986 || | | || || |||||||| |||||||| |||||||| || || | || ||||| Sbjct 596659 CCGTTCTTCTCAACACGTTTCATGAAGAGATCGGGAATCCAGAGGGCAAGGAAAAGATCG 596600 Query 79987 CTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCA 80046 | | | ||| || || || |||||| ||||| |||||| | | | ||| Sbjct 596599 CGAGCGCGGACCTCTTCTTTACCATGGTTCTTTCGGAGATCCAGGAACTCAAAGACATCG 596540 Query 80047 GAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCT 80106 || ||||| || || | || || || | | || ||||| ||||| || || || || Sbjct 596539 GAGTGCCAGGGCTCGAGATAGATAGCAAAGGCACCAGGTCGCTTGTTGCCACCTTGGTCG 596480 Query 80107 ATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCA 80166 | ||||| ||| ||||| || | || | | ||| |||| |||||||||||||||||| Sbjct 596479 ACGTATCGAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCATTGGATGTACCG 596420 Query 80167 TTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCC 80226 ||||| |||| |||||| || | ||||||||| || ||||| || || Sbjct 596419 TTGGTACCGGCGATATAAGAGCCGGTCGCACGAATACGGTGGATGTTGAGACCGATACCA 596360 Query 80227 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTA 80286 || ||||| || ||||| | ||||| || | || ||||| || || || ||||| Sbjct 596359 CCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGGGTGTCATAAATACCATCAATGCTG 596300 Query 80287 TCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT----AGTTCCCGC 80342 ||||| |||||| | || || || |||| | ||| | || || || || Sbjct 596299 TCATCCTTCATGTCGACAAGGAAGCAAGATGACA---GCTGA-GCCTGGGGCGTACCAGC 596244 Query 80343 ATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTC 80402 || || | |||||||| ||||| || || | || |||| || ||||| ||||| Sbjct 596243 GTTGAACAGAGTAGGAGAGGCGTGTGTGAAGTACTTGCTGGACATGAGGTTGTAAGTCTC 596184 Query 80403 AATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTG 80462 |||| | || || || | || || || || |||||||| | ||| ||||| Sbjct 596183 AATAACCCTCTCGATGTCGTCTCCCCAGATACCAACAGCAACACGCATGATCATATGCTG 596124 Query 80463 AGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAA 80522 ||||| || || |||||| ||| | |||| | || ||| |||||||| || || Sbjct 596123 TGGTCTCTCCACAATCTTGCCATTAAGCTTCAGGAGATATGATCGCTCCAAAGTCTTGAA 596064 Query 80523 ACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 80582 || || || | ||| ||||| || ||||| | ||| | |||| ||| | ||||| Sbjct 596063 GCCGAAGTATTGGTAGTTGAAGTCACGGTCGTAGACAATGGCGGAGTCGAGGTCCTCCTT 596004 Query 80583 ATATTTGTTAACTACATCCATGGTGATACT-TGAAATAATCGGAGAATGTTTCCCATTTT 80641 | | | | || || ||| | | || | ||| || || || || | || || | Sbjct 596003 GTGTCTCATGAC-GCAGTCATAGGTTTCCTGGGCAATCATGGGTGATGGTGTGCCGTTCT 595945 Query 80642 TAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGtttttttGTTTCC 80700 |||| |||||||||| | | | | | | || || | || | || || || | | Sbjct 595944 TAGGGTTAACATAGTGGTACAGGT-CGCTGACAACCGACGACCATTGCTTCTTCGTCTGC 595886 Query 80701 TTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTA 80760 ||||| || || || ||||| || | ||| || | ||||| || ||||| || ||| Sbjct 595885 TTGTGGAGGTTGGACACGGCAATGCGGGCAGCCAGGATGGCGTAGTCTGGGTG-GGTGAC 595827 Query 80761 GTACAAGT-GGCTGCTATTTCGGCTGCC 80787 | || || ||| ||| | ||||| ||| Sbjct 595826 GGTCATGTAGGCGGCTGTCTCGGCAGCC 595799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268521670840