Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq2 251 1e-61
>seq2
Length=5746313
Score = 251 bits (278), Expect = 1e-61
Identities = 1318/2068 (64%), Gaps = 47/2068 (2%)
Strand=Plus/Minus
Query 78748 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTC 78807
|| || || |||||||| ||||| || || || || |||| || ||| ||||| |||
Sbjct 597847 GTGCGGAGGTAGTACATGCCCGTCTTCAGGCCTAGCTTCCAGCCCGTGAAGTGCATGCTC 597788
Query 78808 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 78867
|| | ||| | || || || ||||| |||| ||| || ||| ||||||
Sbjct 597787 GTGATCTTGCCCATGGTGGGGTCCCGCATGTGGATGTTCAAAGACTGGGATTGGTCGATG 597728
Query 78868 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 78927
||||| || | ||| |||||||| | | | || || | || ||||| | ||
Sbjct 597727 AAGGCACCACGGTCGGCAGCCATCTGCACAACGGTTCGCTGAGAGATCTCCCACACGGTC 597668
Query 78928 TTATAAACTCGCTTAATATCTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCT 78984
|| || | ||| || || | |||| ||| | | ||||| ||||| ||||| ||
Sbjct 597667 TTGTACAGGGCCTTGATCTCCGCCGGAATGTTGGGAATGTTCTGGATGGAACCACCCTCA 597608
Query 78985 GCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGG 79044
|| || || | |||||| || | || ||| | | ||| | | | ||
Sbjct 597607 GCAATGATACGATTCTTCATGTTGTCGGACCACAGACCCATGTCGACGAGGTCCTTCAGC 597548
Query 79045 AGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 79104
|| || || || || || || || |||| | || | |||| ||| || ||
Sbjct 597547 AGCCAGGGGTTGACCACCTGGAACTCGCCAGCTAGGACACGACGAGAGTAGATGTTGGAT 597488
Query 79105 GTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATA 79164
||||| || || | | || || || |||| || |||| || || || ||||||
Sbjct 597487 GTATAGGGCTCGAAACACTCGTTGTTGCCCAGGATCTGAGATGTACTGGCAGTGGGCATA 597428
Query 79165 GGTGCCACCAATAAACTATTTCTAAGACCGTA-TGATCTGATTTTATCTTTTAGAGATTC 79223
|| |||| ||| | ||| || | | ||| | || | |||| | ||||| || ||
Sbjct 597427 GGAGCCATCAACAGACTGTTGCGGACACCATTCTGCT-TGATCTGCTCTTTGAGGCTCTC 597369
Query 79224 CCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACT 79283
||| |||||||| ||||| ||| || ||||| | || |||||||| ||||| |
Sbjct 597368 CCAGTCCCAAAGGTCAGATGGGGTGACGTTCCACATGTCGTATTGTAGGATACCCTGGGA 597309
Query 79284 AGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGC 79343
| ||| || ||| || || ||||||| || | ||| | || ||
Sbjct 597308 GACAGGTGAGCCCTCGTAGGTGGAGTAGGGTCCTTGCTCCTTGGCGATCTC-CATGGAAG 597250
Query 79344 CTCT-AATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTA 79402
|| | || || || | |||||||| ||||| |||| ||| ||||| | || ||
Sbjct 597249 CTGTCAAGGCACCATGGTAAATGGTCTCGAAGATCTGCTTGTTGAGCTGCCTAGCCTCGG 597190
Query 79403 GGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATAC 79462
| || || || | | | ||| || || || | ||||| ||||| | |
Sbjct 597189 GAGACTCGAAAGGCATGCGGAGGGCTAGAAAAGCATCAGCAAGACCTTGGACACCGAGGC 597130
Query 79463 CGATAGGTCTATGTCTCTTATTAGAAATTTCA-GCTTCTGGAATAGGATAATAATTAATA 79521
|||| || | |||| | | || | || | || ||| ||| ||| || || || | |
Sbjct 597129 CGATGGGACGGTGTCGCATGTT-GCTGTTGCGCGCCTCTTGAACAGGGTAGTAGTTGACA 597071
Query 79522 TCTATAATTTTATTGAGATTCCTGACTATTACTTTGACC-ACATCCTTTAGTTTGAGAAA 79580
|| || || || || || || | || | | | || || || | || || ||||
Sbjct 597070 TCAATGATCTTGTTCAGGTTGCGCACAAC-AGTCTGCGTGACGTCGTGCAGCTTCTGAAA 597012
Query 79581 ATCAAAT-CGTCCA---TCTATT--ACAAACATGTTCAACGCGACAGATGCCAGATTACA 79634
||| | || || | || | || ||| | || || | ||| |||| ||| ||
Sbjct 597011 GTCATAGACGCCCTGGTTGTAGTCGACGAACGAGGGCAGAGCCAGAGAGGCCAAATTGCA 596952
Query 79635 AACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTT 79694
||||| ||||||| || ||| |||| || || || |||||||| ||| |
Sbjct 596951 GACGGCGACCTCATCAGGTGCCGAGTATTCAATGATCTCGGTGCAGAGATTAGAGCTGCG 596892
Query 79695 AATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTA-CACGCATCCTTATAAAGAATGA 79753
||||| || | || | ||| |||||||| ||| || | ||||| || || ||||
Sbjct 596891 GATGGTGCCCAGGTTCTTTTGGTTACTCTTGCGGTTGGCATGG-TCCTTGTAGAGCATGA 596833
Query 79754 ACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTT 79812
| || ||||||| || |||| | || | ||| || | ||||| | || | |||||
Sbjct 596832 AAGGGTTACCAGTCTCGGTCTGGGCCTCCAGAATAGCATACCAGA-GCTTCTGGGCCTTG 596774
Query 79813 ATTATAGACTTGT--ATCTCTTTTCTCTT--TCGTA-TTGT-GTATATAATCGTTCGAAC 79866
|| | |||| | ||| ||| ||||| || | ||| | | ||||||
Sbjct 596773 ATCTT----TTGTCGACCTCGGCCCTCGGCCTCGTACTTCTCGTAGAGGGCC--TCGAAC 596720
Query 79867 TCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCT 79926
|| || || |||||||| | | ||||| || || | || ||||| | || |||||||
Sbjct 596719 TCATCGCCGTAAACATCGGCCAGGCCAGGGCACTCATTGGGGCACATAAGCGTCCACTCT 596660
Query 79927 CCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCT 79986
|| | | || || |||||||| |||||||| |||||||| || || | || |||||
Sbjct 596659 CCGTTCTTCTCAACACGTTTCATGAAGAGATCGGGAATCCAGAGGGCAAGGAAAAGATCG 596600
Query 79987 CTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCA 80046
| | | ||| || || || |||||| ||||| |||||| | | | |||
Sbjct 596599 CGAGCGCGGACCTCTTCTTTACCATGGTTCTTTCGGAGATCCAGGAACTCAAAGACATCG 596540
Query 80047 GAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCT 80106
|| ||||| || || | || || || | | || ||||| ||||| || || || ||
Sbjct 596539 GAGTGCCAGGGCTCGAGATAGATAGCAAAGGCACCAGGTCGCTTGTTGCCACCTTGGTCG 596480
Query 80107 ATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCA 80166
| ||||| ||| ||||| || | || | | ||| |||| ||||||||||||||||||
Sbjct 596479 ACGTATCGAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCATTGGATGTACCG 596420
Query 80167 TTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCC 80226
||||| |||| |||||| || | ||||||||| || ||||| || ||
Sbjct 596419 TTGGTACCGGCGATATAAGAGCCGGTCGCACGAATACGGTGGATGTTGAGACCGATACCA 596360
Query 80227 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTA 80286
|| ||||| || ||||| | ||||| || | || ||||| || || || |||||
Sbjct 596359 CCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGGGTGTCATAAATACCATCAATGCTG 596300
Query 80287 TCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT----AGTTCCCGC 80342
||||| |||||| | || || || |||| | ||| | || || || ||
Sbjct 596299 TCATCCTTCATGTCGACAAGGAAGCAAGATGACA---GCTGA-GCCTGGGGCGTACCAGC 596244
Query 80343 ATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTC 80402
|| || | |||||||| ||||| || || | || |||| || ||||| |||||
Sbjct 596243 GTTGAACAGAGTAGGAGAGGCGTGTGTGAAGTACTTGCTGGACATGAGGTTGTAAGTCTC 596184
Query 80403 AATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTG 80462
|||| | || || || | || || || || |||||||| | ||| |||||
Sbjct 596183 AATAACCCTCTCGATGTCGTCTCCCCAGATACCAACAGCAACACGCATGATCATATGCTG 596124
Query 80463 AGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAA 80522
||||| || || |||||| ||| | |||| | || ||| |||||||| || ||
Sbjct 596123 TGGTCTCTCCACAATCTTGCCATTAAGCTTCAGGAGATATGATCGCTCCAAAGTCTTGAA 596064
Query 80523 ACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 80582
|| || || | ||| ||||| || ||||| | ||| | |||| ||| | |||||
Sbjct 596063 GCCGAAGTATTGGTAGTTGAAGTCACGGTCGTAGACAATGGCGGAGTCGAGGTCCTCCTT 596004
Query 80583 ATATTTGTTAACTACATCCATGGTGATACT-TGAAATAATCGGAGAATGTTTCCCATTTT 80641
| | | | || || ||| | | || | ||| || || || || | || || |
Sbjct 596003 GTGTCTCATGAC-GCAGTCATAGGTTTCCTGGGCAATCATGGGTGATGGTGTGCCGTTCT 595945
Query 80642 TAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGtttttttGTTTCC 80700
|||| |||||||||| | | | | | | || || | || | || || || | |
Sbjct 595944 TAGGGTTAACATAGTGGTACAGGT-CGCTGACAACCGACGACCATTGCTTCTTCGTCTGC 595886
Query 80701 TTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTA 80760
||||| || || || ||||| || | ||| || | ||||| || ||||| || |||
Sbjct 595885 TTGTGGAGGTTGGACACGGCAATGCGGGCAGCCAGGATGGCGTAGTCTGGGTG-GGTGAC 595827
Query 80761 GTACAAGT-GGCTGCTATTTCGGCTGCC 80787
| || || ||| ||| | ||||| |||
Sbjct 595826 GGTCATGTAGGCGGCTGTCTCGGCAGCC 595799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268521670840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |