Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01] 31 sequences; 41,729,728 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq9 105 6e-18 >seq9 Length=2445292 Score = 105 bits (116), Expect = 6e-18 Identities = 198/288 (69%), Gaps = 15/288 (5%) Strand=Plus/Minus Query 99489 CGCG-TGCACCAGCCGCCCCCAGCCCAGGCTGGCGTGCGAG----CCCGGCGCCCCGCTC 99543 |||| ||| |||| | |||| ||| | ||||||||||| || || | || Sbjct 348487 CGCGCTGCGTCAGCTTCTCCCAACCCTTGTTGGCGTGCGAGTTGGCCTGGTGGGCC---- 348432 Query 99544 CGCACGGTGAGCGAGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCAGGCCTC---CAGG 99600 ||||||||||| ||| |||||||| || |||||||| ||||||| |||| Sbjct 348431 CGCACGGTGAGGCAGGCGTTGAGCATGAGGACGCCGCGCTCGGCCCAGGGGGTGAGCAGG 348372 Query 99601 CAGCCGTGCTGCGGCCGCGGGGTCCCGG---GGAAGTTCTTCTGCACGGCCGCGTAGATG 99657 | | || | ||| |||||| || || ||| |||||| | |||| ||| ||| Sbjct 348371 CCGGAGTTGTTGGGCGGCGGGGCGAAGGACGGGTAGTCCTTCTGGAGGGCCTTGTACATG 348312 Query 99658 TTCTGGAGGCTGGGCGGGATCGGAACGCCGCGGTTCACGCTGAAGGCCAGGCCGTGGGCC 99717 |||| |||| ||||||| ||| | || ||||||||| || |||||||| Sbjct 348311 TTCTTGAGGGAGGGCGGGGCCGGCGTGGGCGGGCGGACGCTGAAGCAGAGCCCGTGGGCT 348252 Query 99718 TGCCCGTGGCTGTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGACG 99765 || | | ||||||||||||| ||||||||||| ||||| |||||| Sbjct 348251 TGGTTGACGTTGTGGTAGGGGTCTTGGCCCAGGATCACGACTTTGACG 348204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440899029151560