Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_005261.2
Length=137821
Score E
Sequences producing significant alignments: (Bits) Value
seq9 105 6e-18
>seq9
Length=2445292
Score = 105 bits (116), Expect = 6e-18
Identities = 198/288 (69%), Gaps = 15/288 (5%)
Strand=Plus/Minus
Query 99489 CGCG-TGCACCAGCCGCCCCCAGCCCAGGCTGGCGTGCGAG----CCCGGCGCCCCGCTC 99543
|||| ||| |||| | |||| ||| | ||||||||||| || || | ||
Sbjct 348487 CGCGCTGCGTCAGCTTCTCCCAACCCTTGTTGGCGTGCGAGTTGGCCTGGTGGGCC---- 348432
Query 99544 CGCACGGTGAGCGAGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCAGGCCTC---CAGG 99600
||||||||||| ||| |||||||| || |||||||| ||||||| ||||
Sbjct 348431 CGCACGGTGAGGCAGGCGTTGAGCATGAGGACGCCGCGCTCGGCCCAGGGGGTGAGCAGG 348372
Query 99601 CAGCCGTGCTGCGGCCGCGGGGTCCCGG---GGAAGTTCTTCTGCACGGCCGCGTAGATG 99657
| | || | ||| |||||| || || ||| |||||| | |||| ||| |||
Sbjct 348371 CCGGAGTTGTTGGGCGGCGGGGCGAAGGACGGGTAGTCCTTCTGGAGGGCCTTGTACATG 348312
Query 99658 TTCTGGAGGCTGGGCGGGATCGGAACGCCGCGGTTCACGCTGAAGGCCAGGCCGTGGGCC 99717
|||| |||| ||||||| ||| | || ||||||||| || ||||||||
Sbjct 348311 TTCTTGAGGGAGGGCGGGGCCGGCGTGGGCGGGCGGACGCTGAAGCAGAGCCCGTGGGCT 348252
Query 99718 TGCCCGTGGCTGTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGACG 99765
|| | | ||||||||||||| ||||||||||| ||||| ||||||
Sbjct 348251 TGGTTGACGTTGTGGTAGGGGTCTTGGCCCAGGATCACGACTTTGACG 348204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 440899029151560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |