Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01] 31 sequences; 41,729,728 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq4 102 2e-16 >seq4 Length=3212107 Score = 102 bits (112), Expect = 2e-16 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| || ||||| |||||||| || || |||||| ||||||| || || Sbjct 2383638 AGAACCAGATGCAAGGTAGACTCTTTCTGGATGTTGTAGTCACTCAGAGTTCGGCCATCC 2383579 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || | || || || ||||| || | | ||||| |||||||| || || || || ||| Sbjct 2383578 TCCAACTGCTTGCCGGCAAAGATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCC 2383519 Query 104468 TGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 |||||| ||||| || || || || | ||||| | || ||||| || || || || Sbjct 2383518 TGAATC-TTGCTCTTGACGTTGTCAATAGTATCCGATGACTCAACCTCAAGCGTGATGGT 2383460 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || | || || ||||| || ||||| Sbjct 2383459 CTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 2383427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397942678948