Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 6e-17
>seq1
Length=5759619
Score = 102 bits (112), Expect = 6e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 25737 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 25796
|||||| || || ||| |||| |||||| | | | |||| |||| | || |||||
Sbjct 2010165 CAGCTGGTCGACGCCCTGGCCCGCGTAGTCGGTCGCCGCGTCCACGTACGCCGCCCCGAA 2010106
Query 25797 ATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCC 25856
| || ||||||||||||||||||||| || ||||| || | ||| ||| | | |||
Sbjct 2010105 GTGCCGCCACTGGAACCCGTACACCGGGCCCAGGTCCCCCACCGCCCGGTGGCCCA-GCC 2010047
Query 25857 CCTCT-TATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGG 25915
|| | | |||| || || | || || ||| ||||||||||||| ||||| ||||
Sbjct 2010046 CCACGCTGTCCAGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGACCCCGGCCTCGC 2009987
Query 25916 AGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCC 25965
|||| | || ||| || |||||||||||||||||||||
Sbjct 2009986 TGAGCGCCAGCGACGACGTGTTGCCCGCCACGAACCACAGCAGCTCCGCC 2009937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340137471491763
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |