Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01] 31 sequences; 41,729,728 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq1 102 6e-17 >seq1 Length=5759619 Score = 102 bits (112), Expect = 6e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 25737 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 25796 |||||| || || ||| |||| |||||| | | | |||| |||| | || ||||| Sbjct 2010165 CAGCTGGTCGACGCCCTGGCCCGCGTAGTCGGTCGCCGCGTCCACGTACGCCGCCCCGAA 2010106 Query 25797 ATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCC 25856 | || ||||||||||||||||||||| || ||||| || | ||| ||| | | ||| Sbjct 2010105 GTGCCGCCACTGGAACCCGTACACCGGGCCCAGGTCCCCCACCGCCCGGTGGCCCA-GCC 2010047 Query 25857 CCTCT-TATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGG 25915 || | | |||| || || | || || ||| ||||||||||||| ||||| |||| Sbjct 2010046 CCACGCTGTCCAGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGACCCCGGCCTCGC 2009987 Query 25916 AGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCC 25965 |||| | || ||| || ||||||||||||||||||||| Sbjct 2009986 TGAGCGCCAGCGACGACGTGTTGCCCGCCACGAACCACAGCAGCTCCGCC 2009937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340137471491763