Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_005946.1
Length=105903
Score E
Sequences producing significant alignments: (Bits) Value
seq6 82.4 5e-11
>seq6
Length=2893484
Score = 82.4 bits (90), Expect = 5e-11
Identities = 133/183 (73%), Gaps = 10/183 (5%)
Strand=Plus/Minus
Query 71419 GTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTC-CTT 71477
||||| | ||||||| |||||| ||||||||||| | ||||| || || || || |
Sbjct 2808828 GTCATACGTGAGGGAATGGCGTGCGGGTTGATGATAATATCGGGGACTACACCCTCACGC 2808769
Query 71478 GTCGAAGGGCATGTCCTCCTG--GGT-CAGGACAGCTCCGCATGTCCCCTTTTGCGCCGT 71534
|| |||||||||||| ||||| | | | |||| ||| ||| ||||| || ||||
Sbjct 2808768 GT-GAAGGGCATGTCTTCCTGACGATACGTGACA---CCGATTGTTCCCTTCTG-TCCGT 2808714
Query 71535 GA-ATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTGA 71593
|| || |||||||||||||| |||| ||| ||| ||| | | || |||||||
Sbjct 2808713 GACGAGAGGCAAACTTGTCGCCAATCTGCGGGATTTTGGTGGTGCGAACCCGTACCTTGA 2808654
Query 71594 CGA 71596
|||
Sbjct 2808653 CGA 2808651
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338764672010424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |