Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01] 31 sequences; 41,729,728 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq6 82.4 5e-11 >seq6 Length=2893484 Score = 82.4 bits (90), Expect = 5e-11 Identities = 133/183 (73%), Gaps = 10/183 (5%) Strand=Plus/Minus Query 71419 GTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTC-CTT 71477 ||||| | ||||||| |||||| ||||||||||| | ||||| || || || || | Sbjct 2808828 GTCATACGTGAGGGAATGGCGTGCGGGTTGATGATAATATCGGGGACTACACCCTCACGC 2808769 Query 71478 GTCGAAGGGCATGTCCTCCTG--GGT-CAGGACAGCTCCGCATGTCCCCTTTTGCGCCGT 71534 || |||||||||||| ||||| | | | |||| ||| ||| ||||| || |||| Sbjct 2808768 GT-GAAGGGCATGTCTTCCTGACGATACGTGACA---CCGATTGTTCCCTTCTG-TCCGT 2808714 Query 71535 GA-ATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTGA 71593 || || |||||||||||||| |||| ||| ||| ||| | | || ||||||| Sbjct 2808713 GACGAGAGGCAAACTTGTCGCCAATCTGCGGGATTTTGGTGGTGCGAACCCGTACCTTGA 2808654 Query 71594 CGA 71596 ||| Sbjct 2808653 CGA 2808651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338764672010424