Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq4 125 6e-24
>seq4
Length=3212107
Score = 125 bits (138), Expect = 6e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||| ||||| ||||| || || || | ||| || || |||| ||| | |||||||
Sbjct 2383635 ACCAGATGCAAGGTAGACTCTTTCTGGATGTTGTAGTCACTCAGAGTTCGGCCATCCTCC 2383576
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
| ||| || ||| ||||||| |||| ||| || || ||||||||||| || ||||| | |
Sbjct 2383575 AACTGCTTGCCGGCAAAGATCAATCGTTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGA 2383516
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || ||||||| | | | ||| || | || || |||| ||||||||| |||
Sbjct 2383515 ATCTTGCTCTTGACGTTGTCAATAGTATCCGATGACTCAACCTCAAGCGTGATGGTCTTT 2383456
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || | ||| || |||||||| |||||
Sbjct 2383455 CCGGTCAAAGTCTTGACAAAGATTTGCAT 2383427
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||| ||| | || |||||||| || | ||| || ||||||| || | |||||||
Sbjct 2383863 ACCAGGTGAAGTGTTGATTCCTTCTGAATGTTGTAGTCGCTCAAGGTACGGCCATCCTCC 2383804
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
| ||| || || ||||||| | | || ||||| || ||||||||||| ||||| |
Sbjct 2383803 AACTGCTTGCCAGCAAAGATAAGACGCTGTTGATCCGGGGGAATACCTTCCTTGTCCTGG 2383744
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || ||||||| | | | ||| || | || || || | ||||| || |||
Sbjct 2383743 ATCTTGCTCTTGACGTTGTCAATAGTATCCGACGACTCAACCTCGAGGGTGATCGTCTTT 2383684
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || | || || || |||||||||||
Sbjct 2383683 CCCGTCAATGTCTTGACGAAGATCTGCAT 2383655
Score = 84.2 bits (92), Expect = 2e-11
Identities = 114/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||| || || || ||| ||||||| || | || || || || || || || || |||
Sbjct 2383060 TCCTCAAGTTGCTTGCCGGCAAAGATCAAACGCTGTTGGTCAGGCGGGATGCCCTCCTTG 2383001
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || | ||| ||| | ||| |||||| | | ||||| || | ||||||
Sbjct 2383000 TCCTGGATCTTGGACTTCACGTTGTCGATAGTGTCGGAGGACTCGACCTCGAGAGTGATG 2382941
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011
|| || || || || || ||||| |||||||||||| ||
Sbjct 2382940 GTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATGGTT 2382902
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448291026287160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |