Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq2 95.1 1e-14
>seq2
Length=5746313
Score = 95.1 bits (104), Expect = 1e-14
Identities = 421/653 (64%), Gaps = 19/653 (3%)
Strand=Plus/Minus
Query 148241 GCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAA 148300
||| ||||||||||| || ||||| ||| ||||||| || | ||| || |||| |
Sbjct 596756 GCCCTCGGCCTCGTACTTCTCGTAGAGGGCCTCGAACTCATCGCCGTAAACATCGGCCAG 596697
Query 148301 ACCGGGACACTCGTCGGGGCACATCAATGACCA-TTTCCCTCCTGTCTTTACCCTCTTCA 148359
|| || ||||| | ||||||||| | | ||| | ||| | || ||| || | ||||
Sbjct 596696 GCCAGGGCACTCATTGGGGCACATAAGCGTCCACTCTCCGTTCT-TCTCAACACGTTTCA 596638
Query 148360 TAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTCGGCAC 148419
| || ||||| || |||| | ||||| | |||||||||||| | || || ||
Sbjct 596637 TGAAGAGATCGGGAATCCAGAGGGCAAGGAAAAGATCGCGAGCGCGGACCTCTTCTTTAC 596578
Query 148420 CCATATTGCGCTTT---AGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTCGATGT 148476
| || | |||| ||||||| || ||| || || | |||||| ||||||| |
Sbjct 596577 C---ATGGTTCTTTCGGAGATCCAGGAACTCAAAGACATCGGAGTGCCAGGGCTCGAGAT 596521
Query 148477 ATACGGTCATGGCGCC---TTTCCTTTTACCTCCTTGATCGACATGGCGTAGCA-TGCTA 148532
| | | | ||| || | | | || || ||||| ||||| | || |||| || |
Sbjct 596520 AGATAGCAAAGGCACCAGGTCGCTTGTTGCCACCTTGGTCGACGTATCG-AGCAGTGTTG 596462
Query 148533 TTAAAAACACGCAATGCA-GGTCCCAATCCCGCCGCA-GTTCCGTTTGTGGATTCAATTT 148590
|| ||||||| | ||| || |||| || | | || ||||| || | || |
Sbjct 596461 TT--GAACACGCGAAGCATGGGAACAATACCATTGGATGTACCGTTGGTACCGGCGATAT 596404
Query 148591 TACTATTGGTGGCGCGAATTTGAGTGACATTCAGGCCGATGCCGCCTCCGTGTTTAGATA 148650
| ||| || ||||| | || || || ||||| || || | || || |
Sbjct 596403 AAGAGCCGGTCGCACGAATACGGTGGATGTTGAGACCGATACCACCGGCCATCTTGGAGA 596344
Query 148651 TCATGGCACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAATGTTAA 148710
||||||| ||| ||||| || | ||| || || | ||| ||||| || | |||| |
Sbjct 596343 TCATGGCGCAAGTCTTGAGGGTGTCATAAATACCATCAATGCTGTCATCCTTCATGTCGA 596284
Query 148711 GCAGGTAGCACGATGACATTTGAGGCATTTTCATGCCAGACGAAAATAGAGTTGGACTAG 148770
||| |||| ||||||| |||| | | | |||| || ||||| ||| |
Sbjct 596283 CAAGGAAGCAAGATGACAGCTGAGCCTGGGGCGTACCAGCGTTGAACAGAGTAGGAGAGG 596224
Query 148771 CGTGAGTGAACAGCTTTGCCCG-CATCAATCTATAGGATTCGATAGCGCTTTCGATGTCA 148829
|||| ||||| | |||| | ||| | | || | || ||| | || ||||||||
Sbjct 596223 CGTGTGTGAAGTAC-TTGCTGGACATGAGGTTGTAAGTCTCAATAACCCTCTCGATGTCG 596165
Query 148830 TCACCATGAATCTGTAGAGCTACACGCATCAGCATGTGTTGAGGCCTCTCGAC 148882
|| || || | ||| |||||||| | ||| || || || ||||| ||
Sbjct 596164 TCTCCCCAGATACCAACAGCAACACGCATGATCATATGCTGTGGTCTCTCCAC 596112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478662214518320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |