Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01] 31 sequences; 41,729,728 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 1e-14 >seq2 Length=5746313 Score = 95.1 bits (104), Expect = 1e-14 Identities = 421/653 (64%), Gaps = 19/653 (3%) Strand=Plus/Minus Query 148241 GCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAA 148300 ||| ||||||||||| || ||||| ||| ||||||| || | ||| || |||| | Sbjct 596756 GCCCTCGGCCTCGTACTTCTCGTAGAGGGCCTCGAACTCATCGCCGTAAACATCGGCCAG 596697 Query 148301 ACCGGGACACTCGTCGGGGCACATCAATGACCA-TTTCCCTCCTGTCTTTACCCTCTTCA 148359 || || ||||| | ||||||||| | | ||| | ||| | || ||| || | |||| Sbjct 596696 GCCAGGGCACTCATTGGGGCACATAAGCGTCCACTCTCCGTTCT-TCTCAACACGTTTCA 596638 Query 148360 TAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTCGGCAC 148419 | || ||||| || |||| | ||||| | |||||||||||| | || || || Sbjct 596637 TGAAGAGATCGGGAATCCAGAGGGCAAGGAAAAGATCGCGAGCGCGGACCTCTTCTTTAC 596578 Query 148420 CCATATTGCGCTTT---AGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTCGATGT 148476 | || | |||| ||||||| || ||| || || | |||||| ||||||| | Sbjct 596577 C---ATGGTTCTTTCGGAGATCCAGGAACTCAAAGACATCGGAGTGCCAGGGCTCGAGAT 596521 Query 148477 ATACGGTCATGGCGCC---TTTCCTTTTACCTCCTTGATCGACATGGCGTAGCA-TGCTA 148532 | | | | ||| || | | | || || ||||| ||||| | || |||| || | Sbjct 596520 AGATAGCAAAGGCACCAGGTCGCTTGTTGCCACCTTGGTCGACGTATCG-AGCAGTGTTG 596462 Query 148533 TTAAAAACACGCAATGCA-GGTCCCAATCCCGCCGCA-GTTCCGTTTGTGGATTCAATTT 148590 || ||||||| | ||| || |||| || | | || ||||| || | || | Sbjct 596461 TT--GAACACGCGAAGCATGGGAACAATACCATTGGATGTACCGTTGGTACCGGCGATAT 596404 Query 148591 TACTATTGGTGGCGCGAATTTGAGTGACATTCAGGCCGATGCCGCCTCCGTGTTTAGATA 148650 | ||| || ||||| | || || || ||||| || || | || || | Sbjct 596403 AAGAGCCGGTCGCACGAATACGGTGGATGTTGAGACCGATACCACCGGCCATCTTGGAGA 596344 Query 148651 TCATGGCACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAATGTTAA 148710 ||||||| ||| ||||| || | ||| || || | ||| ||||| || | |||| | Sbjct 596343 TCATGGCGCAAGTCTTGAGGGTGTCATAAATACCATCAATGCTGTCATCCTTCATGTCGA 596284 Query 148711 GCAGGTAGCACGATGACATTTGAGGCATTTTCATGCCAGACGAAAATAGAGTTGGACTAG 148770 ||| |||| ||||||| |||| | | | |||| || ||||| ||| | Sbjct 596283 CAAGGAAGCAAGATGACAGCTGAGCCTGGGGCGTACCAGCGTTGAACAGAGTAGGAGAGG 596224 Query 148771 CGTGAGTGAACAGCTTTGCCCG-CATCAATCTATAGGATTCGATAGCGCTTTCGATGTCA 148829 |||| ||||| | |||| | ||| | | || | || ||| | || |||||||| Sbjct 596223 CGTGTGTGAAGTAC-TTGCTGGACATGAGGTTGTAAGTCTCAATAACCCTCTCGATGTCG 596165 Query 148830 TCACCATGAATCTGTAGAGCTACACGCATCAGCATGTGTTGAGGCCTCTCGAC 148882 || || || | ||| |||||||| | ||| || || || ||||| || Sbjct 596164 TCTCCCCAGATACCAACAGCAACACGCATGATCATATGCTGTGGTCTCTCCAC 596112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662214518320