Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01]
31 sequences; 41,729,728 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq2 347 3e-90
>seq2
Length=5746313
Score = 347 bits (384), Expect = 3e-90
Identities = 1142/1747 (65%), Gaps = 40/1747 (2%)
Strand=Plus/Plus
Query 363433 AATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCAT 363492
||||| | ||||| || | || ||||||||| | |||||||||||| ||||||||
Sbjct 596100 AATGGCAAGATTGTGGAGAGACCACAGCATATGATCATGCGTGTTGCTGTTGGTATCTGG 596159
Query 363493 TGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCA 363550
| || | || | ||||| || || || || | || | | ||| ||||
Sbjct 596160 GGAGACGACATCGAGAGGGTTATTGAGACTTACAACCTCAT--GTCCAGCAAGTACTTCA 596217
Query 363551 CGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCT 363610
| |||||| | || || ||| ||| ||||| || | | | ||| |||| |||||||
Sbjct 596218 CACACGCCTCTCCTACTCTGTTCAACGCTGGTACGCCCCAGGCTCAGCTGTCATCTTGCT 596277
Query 363611 TTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTG 363670
| ||| | | |||||||| || ||| || ||||| | |||||| || |||| ||| |
Sbjct 596278 TCCTTGTCGACATGAAGGATGACAGCATTGATGGTATTTATGACACCCTCAAGACTTGCG 596337
Query 363671 CTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAG 363729
| | || ||||||| || || || || ||| | |||||| | ||||||| || |
Sbjct 596338 CCATGATCTCCAAGATGGCCGGTGGTATCGGTCTCAACATCCACCGTATTCGTGCGACCG 596397
Query 363730 AACAGTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGT 363788
| ||| || ||| || || ||| || ||||| | |||||||||||||| ||
Sbjct 596398 G-CTCTTATATCGCCGGTACCAACGG-TACATCCAATGGTATTGTTCCCATGCTTCGCGT 596455
Query 363789 GTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGC 363848
||| |||| ||||| | ||||||||||| ||||| ||||| || || |||||
Sbjct 596456 GTTCAACAACACTGCTCGATACGTCGACCAAGGTGGCAACAAGCGACCTGGTGCCTTTGC 596515
Query 363849 TATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACAC 363908
||| ||||||||||| || ||||| | |||||||| || || ||||| || |||
Sbjct 596516 TATCTATCTCGAGCCCTGGCACTCCGATGTCTTTGAGTTCCTGGATCTCCGAAAGAACCA 596575
Query 363909 GGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTT 363968
|| ||||| || | || || || ||||| ||| ||| || ||| || | || | ||
Sbjct 596576 TGGTAAAGAAGAGGTCCGCGCTCGCGATCTTTTCCTTGCCCTCTGGATTCCCGATCTCTT 596635
Query 363969 TATGAAGCGCGTGGAGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAG 364027
||||| || || || | || || | ||| | || | ||||| | || || || |
Sbjct 596636 CATGAAACGTGTTGA-GAAGAACGGAGAGTGGACGCTTATGTGCCCCAATGAGTGCCCTG 596694
Query 364028 GTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGG 364087
| || ||||||| | || || || | | || || ||||| ||||| || | ||||
Sbjct 596695 GCCTGGCCGATGTTTACGGCGATGAGTTCGAGGCCCTCTACGAGAAGTACGAGGCCGAGG 596754
Query 364088 GAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGA 364147
| | ||| | | || || |||||||| |||| ||| || |||| | ||||
Sbjct 596755 GCCGAGGTCGACAAAAGATCAAGGCCCAGAAGCTCTGGTATGCTATTCTGGAGGCCCAGA 596814
Query 364148 TTGAGACAGGAACACCCTAT-ATGTTGTACAAAGATTCGTG-CAACCGCAAGTCCAACCA 364205
||||| || | ||||| | ||| | ||||| || | || |||||||||| |||||
Sbjct 596815 CCGAGACTGGTA-ACCCTTTCATGCTCTACAAGGA-CCATGCCAACCGCAAGAGTAACCA 596872
Query 364206 GCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCG 364264
|| |||| || || | || |||| | || || || |||||||| ||||||||| | |
Sbjct 596873 AAAGAACCTGGGCACCA-TCCGCAGCTCTAATCTCTGCACCGAGATCATTGAATACTCGG 596931
Query 364265 CTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT----- 364319
| || || ||| ||||| || || | || || | || || || |||| ||
Sbjct 596932 CACCTGATGAGGTCGCCGTCTGCAATTTGGCCTCTCTGGCTCTGCCCTCGTTCGTCGACT 596991
Query 364320 -AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCA 364378
|| | || | |||| ||| | || | ||||| || | || | |||
Sbjct 596992 ACAACCAGGGCGTCTATGACTTTCAGAAGCTGCACGACGTCACGCAGACTGTTGTGCGCA 597051
Query 364379 ATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTC 364433
| || ||||| | || || || || || || ||| || || || |||
Sbjct 597052 ACCTGAACAAGATCATTGATGTCAACTACTACCCTGTTCAAGAGGCGCGCAACAGC---- 597107
Query 364434 TAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGAT 364493
|| ||||| || || || || || || ||||| || || || ||||| | |||| |
Sbjct 597108 -AACATGCGACACCGTCCCATCGGCCTCGGTGTCCAAGGTCTTGCTGATGCTTTTCTAGC 597166
Query 364494 GCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAAC 364553
||| ||| | || || || || || ||| | || || ||| ||||||| || ||
Sbjct 597167 CCTCCGCATGCCTTTCGAGTCTCCCGAGGCTAGGCAGCTCAACAAGCAGATCTTCGAGAC 597226
Query 364554 AATGTATTTTGCCGCAATGACTGCTT-CGTGTGATTTGGCAAAAACCAAGGGAAAGTACT 364612
|| || || || |||| |||| | || | | ||| | ||| ||| ||||
Sbjct 597227 CATTTACCATGGTGCCTTGACAGCTTCCATGGAGATCGCCAAGGAGCAA-GGACCCTACT 597285
Query 364613 CTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCA 364672
| || || ||||| || ||| | || ||||| | | || | || | ||||| ||||
Sbjct 597286 CCACCTACGAGGGCTCACCTGTCTCCCAGGGTATCCTACAATACGACATGTGGAACGTCA 597345
Query 364673 CGCCATCTGTCCGATGGAACTGGGATA--CGCTACGTTCCAACGTTAAGAAGCATGGTAC 364730
| ||||||| || ||| ||||||| | | | | | | | | ||| || |||||
Sbjct 597346 CCCCATCTGACCTTTGGGACTGGGAGAGCCTCAAAGAGC--AGATCAAGCAGAATGGTGT 597403
Query 364731 TCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAA 364790
|||||| || | | || || |||||||| || ||| | |||||||| || ||
Sbjct 597404 CCGCAACAGTCTGTTGATGGCTCCTATGCCCACTGCCAGTACATCTCAGATCCTGGGCAA 597463
Query 364791 CAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGA 364850
||||||||| ||||| || | |||| ||| | || || || || || || | || ||
Sbjct 597464 CAACGAGTGTTTCGAGCCCTATACATCCAACATCTACTCTCGTCGTGTCCTAGCTGGCGA 597523
Query 364851 ATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGA 364910
|| | ||| || || | || | ||||| || |||| || |||||| ||
Sbjct 597524 GTTCCAGGTGGTCAACCCCTGGCTGCTGAAGGACCTCGTCGACATGGGTCTGTGGTCCGA 597583
Query 364911 CAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCC 364970
|| ||||||||| |||||| || | |||||| | ||||||||||| ||||
Sbjct 597584 CAACATGAAGAATCGTATCATTGCTGAGGGTGGTTCCATCCAGAACATTCCCAACATTCC 597643
Query 364971 AGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGA 365030
| || | ||| | | ||||| ||||| ||||| || || |||||| | | |
Sbjct 597644 GGCGGAGATCAAGGCCCTGTACAAGACCGTGTGGGAGATCTCTCAGCGAACCGTTGTGCA 597703
Query 365031 TATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGAC 365090
||||| ||||| || ||||| || ||| || |||||| || ||| | ||||
Sbjct 597704 GATGGCTGCCGACCGTGGTGCCTTCATCGACCAATCCCAGTCTTTGAACATCCACATGCG 597763
Query 365091 TCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGG-TGGAAATCCGGTCTTA 365149
| || ||| | |||| | || |||||| ||| ||||| ||||| || || |
Sbjct 597764 GGACCCCACCATGGGCAAGATCACGAGCATGCACTTC-ACGGGCTGGAAGCTAGGCCTGA 597822
Query 365150 AGACAGG 365156
|||| ||
Sbjct 597823 AGACGGG 597829
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353082324242
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |