Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Didymobotryum_20rigidum_20[genbank_20GCA_5F001600575.1_202016-03-01] 31 sequences; 41,729,728 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq8 89.7 3e-13 >seq8 Length=2477967 Score = 89.7 bits (98), Expect = 3e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 ||| || | || ||||| || | || || ||||||||||| || || ||||| || || Sbjct 2273375 ACCTCCACGCAGACGCAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 2273316 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | || |||| || | || || ||||| || || | ||| ||||| |||| || Sbjct 2273315 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGTTGGTCGGGCGG 2273256 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || |||||| |||||| || || ||| ||||| | || || || | || || Sbjct 2273255 GATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCAC 2273196 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321 || | || ||||| || ||||| | ||| || ||||| ||||||||| || Sbjct 2273195 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGATT 2273144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947073452761